RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 ADALQ6DHV7 355 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 BRAPQ7Z569 592 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 SIAH1Q8IUQ4 282 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 PNMA1Q8ND90 353 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 KCNG4Q8TDN1 519 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 ACER1Q8TDN7 264 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 SRPK1Q96SB4 655 aaKnown RBP12.96□□□□□ -0.33
LINC00538-201ENST00000626109 SENP2Q9HC62 589 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 LUZP4Q9P127 313 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 DCTN4Q9UJW0 460 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 PYCARDQ9ULZ3 195 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 TMX2Q9Y320 296 aa12.96□□□□□ -0.33
LINC00538-201ENST00000626109 A0A1W2PQ27 194 aa12.96□□□□□ -0.34
LINC00538-201ENST00000626109 A0A1W2PQ64 194 aa12.96□□□□□ -0.34
LINC00538-201ENST00000626109 A0A1W2PQD8 194 aa12.96□□□□□ -0.34
LINC00538-201ENST00000626109 A0A1W2PRG0 241 aa12.96□□□□□ -0.34
LINC00538-201ENST00000626109 TRIM75PA6NK02 468 aa12.96□□□□□ -0.34
LINC00538-201ENST00000626109 CPLX1O14810 134 aa12.96□□□□□ -0.34
LINC00538-201ENST00000626109 USP14P54578 494 aa12.96□□□□□ -0.34
LINC00538-201ENST00000626109 RGMBQ6NW40 437 aa12.96□□□□□ -0.34
LINC00538-201ENST00000626109 ZNF654Q8IZM8 581 aa12.96□□□□□ -0.34
LINC00538-201ENST00000626109 ZNF710Q8N1W2 664 aa12.96□□□□□ -0.34
LINC00538-201ENST00000626109 MRPS27Q92552 414 aaKnown RBP12.96□□□□□ -0.34
LINC00538-201ENST00000626109 C8orf76Q96K31 380 aa12.96□□□□□ -0.34
LINC00538-201ENST00000626109 USP28Q96RU2 1077 aa12.96□□□□□ -0.34
LINC00538-201ENST00000626109 KIAA1683Q9H0B3 1180 aa12.96□□□□□ -0.34
LINC00538-201ENST00000626109 RABL2BQ9UNT1 228 aa12.96□□□□□ -0.34
LINC00538-201ENST00000626109 AFG3L2Q9Y4W6 797 aa12.96□□□□□ -0.34
LINC00538-201ENST00000626109 GOLGA8BA8MQT2 603 aa12.95□□□□□ -0.34
LINC00538-201ENST00000626109 DDAH1O94760 285 aa12.95□□□□□ -0.34
LINC00538-201ENST00000626109 ZNF157P51786 506 aaPredicted RBP12.95□□□□□ -0.34
LINC00538-201ENST00000626109 BACE1P56817 501 aa12.95□□□□□ -0.34
LINC00538-201ENST00000626109 MTMR2Q13614 643 aa12.95□□□□□ -0.34
LINC00538-201ENST00000626109 ZYXQ15942 572 aaKnown RBP12.95□□□□□ -0.34
LINC00538-201ENST00000626109 APOA5Q6Q788 366 aa12.95□□□□□ -0.34
LINC00538-201ENST00000626109 CEP57L1Q8IYX8 460 aa12.95□□□□□ -0.34
LINC00538-201ENST00000626109 C17orf53Q8N3J3 647 aaPredicted RBP12.95□□□□□ -0.34
LINC00538-201ENST00000626109 FSIP1Q8NA03 581 aa12.95□□□□□ -0.34
LINC00538-201ENST00000626109 GMCL1P1Q8NEA9 526 aa12.95□□□□□ -0.34
LINC00538-201ENST00000626109 WNK4Q96J92 1243 aa12.95□□□□□ -0.34
LINC00538-201ENST00000626109 VCPKMTQ9H867 229 aa12.95□□□□□ -0.34
LINC00538-201ENST00000626109 NCOA5Q9HCD5 579 aaKnown RBP12.95□□□□□ -0.34
LINC00538-201ENST00000626109 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
LINC00538-201ENST00000626109 C19orf81C9J6K1 198 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 CXCL11O14625 94 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 ZBTB43O43298 467 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 YEATS4O95619 227 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 CALM1P0DP23 149 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 CALM2P0DP24 149 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 CALM3P0DP25 149 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 ZNF132P52740 706 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 SNW1Q13573 536 aaKnown RBP12.94□□□□□ -0.34
LINC00538-201ENST00000626109 IQCB1Q15051 598 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 STK38Q15208 465 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 USP17L2Q6R6M4 530 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 SNX32Q86XE0 403 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 MICU3Q86XE3 530 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 ENGASEQ8NFI3 743 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 NUP133Q8WUM0 1156 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 HHIPL1Q96JK4 782 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.94□□□□□ -0.34
LINC00538-201ENST00000626109 SDF4Q9BRK5 362 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 TMX1Q9H3N1 280 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 SUDS3Q9H7L9 328 aaPredicted RBP12.94□□□□□ -0.34
LINC00538-201ENST00000626109 METTL5Q9NRN9 209 aaKnown RBP12.94□□□□□ -0.34
LINC00538-201ENST00000626109 FAM217BQ9NTX9 383 aaPredicted RBP12.94□□□□□ -0.34
LINC00538-201ENST00000626109 PAXBP1Q9Y5B6 917 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 MYH4Q9Y623 1939 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 F5H6K3 240 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 COQ9O75208 318 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 CDKL5O76039 1030 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 ZBTB48P10074 688 aaPredicted RBP12.94□□□□□ -0.34
LINC00538-201ENST00000626109 CD151P48509 253 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 RCAN1P53805 252 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 TPM4P67936 248 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 KLRC3Q07444 240 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 SERINC3Q13530 473 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 SLFN13Q68D06 897 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 CPLX2Q6PUV4 134 aaKnown RBP12.94□□□□□ -0.34
LINC00538-201ENST00000626109 GLYCTKQ8IVS8 523 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 LPAR1Q92633 364 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 TBC1D20Q96BZ9 403 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 MYL10Q9BUA6 226 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 TMOD4Q9NZQ9 345 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 FBXO2Q9UK22 296 aaPredicted RBP12.94□□□□□ -0.34
LINC00538-201ENST00000626109 KCNH4Q9UQ05 1017 aa12.94□□□□□ -0.34
LINC00538-201ENST00000626109 PHIPQ8WWQ0 1821 aa12.93□□□□□ -0.34
LINC00538-201ENST00000626109 GOLGA8AA7E2F4 631 aa12.93□□□□□ -0.34
LINC00538-201ENST00000626109 ATP9BO43861 1147 aa12.93□□□□□ -0.34
LINC00538-201ENST00000626109 PRMT3O60678 531 aa12.93□□□□□ -0.34
LINC00538-201ENST00000626109 NDUFB10O96000 172 aa12.93□□□□□ -0.34
LINC00538-201ENST00000626109 PRR29P0C7W0 189 aa12.93□□□□□ -0.34
LINC00538-201ENST00000626109 HMGCS2P54868 508 aa12.93□□□□□ -0.34
LINC00538-201ENST00000626109 CHMP4BP1P59074 171 aa12.93□□□□□ -0.34
LINC00538-201ENST00000626109 SNAPC2Q13487 334 aa12.93□□□□□ -0.34
LINC00538-201ENST00000626109 SPRYD7Q5W111 196 aa12.93□□□□□ -0.34
LINC00538-201ENST00000626109 RASAL3Q86YV0 1011 aa12.93□□□□□ -0.34
LINC00538-201ENST00000626109 FBXO18Q8NFZ0 1043 aa12.93□□□□□ -0.34
LINC00538-201ENST00000626109 CTCFLQ8NI51 663 aaPredicted RBP12.93□□□□□ -0.34
LINC00538-201ENST00000626109 PAWRQ96IZ0 340 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms