RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 TCP11X2Q5H9J9 407 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 RRAGBQ5VZM2 374 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 NOC3LQ8WTT2 800 aaKnown RBP19.59■□□□□ 0.73
PCF11-207ENST00000624931 CHURC1Q8WUH1 139 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 LPAR1Q92633 364 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 AMNQ9BXJ7 453 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 RANBP17Q9H2T7 1088 aaKnown RBP19.59■□□□□ 0.73
PCF11-207ENST00000624931 RIC8AQ9NPQ8 531 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 FEZ2Q9UHY8 353 aaPredicted RBP19.59■□□□□ 0.73
PCF11-207ENST00000624931 CTNND2Q9UQB3 1225 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 PARP14Q460N5 1801 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 CAPN2P17655 700 aa19.58■□□□□ 0.72
PCF11-207ENST00000624931 ARHGAP25P42331 645 aa19.58■□□□□ 0.72
PCF11-207ENST00000624931 IREB2P48200 963 aaKnown RBP19.58■□□□□ 0.72
PCF11-207ENST00000624931 CASP8Q14790 479 aa19.58■□□□□ 0.72
PCF11-207ENST00000624931 E2F4Q16254 413 aa19.58■□□□□ 0.72
PCF11-207ENST00000624931 FAM160B2Q86V87 743 aa19.58■□□□□ 0.72
PCF11-207ENST00000624931 GOLGA6L1Q8N7Z2 621 aa19.58■□□□□ 0.72
PCF11-207ENST00000624931 PNKPQ96T60 521 aa19.58■□□□□ 0.72
PCF11-207ENST00000624931 RASSF4Q9H2L5 321 aa19.58■□□□□ 0.72
PCF11-207ENST00000624931 ZSWIM4Q9H7M6 989 aa19.58■□□□□ 0.72
PCF11-207ENST00000624931 ZNF408Q9H9D4 720 aa19.58■□□□□ 0.72
PCF11-207ENST00000624931 NMRK2Q9NPI5 230 aa19.58■□□□□ 0.72
PCF11-207ENST00000624931 VPS18Q9P253 973 aa19.58■□□□□ 0.72
PCF11-207ENST00000624931 AFG3L2Q9Y4W6 797 aa19.58■□□□□ 0.72
PCF11-207ENST00000624931 PTPRFP10586 1907 aa19.57■□□□□ 0.72
PCF11-207ENST00000624931 TARSL2A2RTX5 802 aaKnown RBP19.57■□□□□ 0.72
PCF11-207ENST00000624931 KCNJ18B7U540 433 aa19.57■□□□□ 0.72
PCF11-207ENST00000624931 NF2P35240 595 aa19.57■□□□□ 0.72
PCF11-207ENST00000624931 KRT83P78385 493 aa19.57■□□□□ 0.72
PCF11-207ENST00000624931 AMPD2Q01433 879 aa19.57■□□□□ 0.72
PCF11-207ENST00000624931 KCNJ12Q14500 433 aa19.57■□□□□ 0.72
PCF11-207ENST00000624931 KRT25Q7Z3Z0 450 aa19.57■□□□□ 0.72
PCF11-207ENST00000624931 OR8K1Q8NGG5 319 aa19.57■□□□□ 0.72
PCF11-207ENST00000624931 BBXQ8WY36 941 aaPredicted RBP19.57■□□□□ 0.72
PCF11-207ENST00000624931 SLF1Q9BQI6 1058 aa19.57■□□□□ 0.72
PCF11-207ENST00000624931 CSADQ9Y600 493 aa19.57■□□□□ 0.72
PCF11-207ENST00000624931 EPN1Q9Y6I3 576 aaPredicted RBP19.57■□□□□ 0.72
PCF11-207ENST00000624931 USP17L15C9J2P7 530 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 USP17L13C9JLJ4 530 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 USP17L11C9JVI0 530 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 USP17L18D6R9N7 530 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 USP17L22D6RA61 530 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 USP17L17D6RBQ6 530 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 USP17L19D6RCP7 530 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 USP17L20D6RJB6 530 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 PLA2G6O60733 806 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 MCM7P33993 719 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 KRT9P35527 623 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 LONP1P36776 959 aaKnown RBP19.56■□□□□ 0.72
PCF11-207ENST00000624931 USP14P54578 494 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 ERVK-24P63145 666 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 USP17L24Q0WX57 530 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 USP17L6PQ6QN14 398 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 CUL5Q93034 780 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 IQCDQ96DY2 449 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 PSTPIP2Q9H939 334 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 OPLAHO14841 1288 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 FLOT1O75955 427 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 EEF1GP26641 437 aaKnown RBP19.56■□□□□ 0.72
PCF11-207ENST00000624931 AARSP49588 968 aaKnown RBP eCLIP19.56■□□□□ 0.72
PCF11-207ENST00000624931 NONOQ15233 471 aaKnown RBP eCLIP19.56■□□□□ 0.72
PCF11-207ENST00000624931 PDXDC2PQ6P474 469 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 RETREG2Q8NC44 543 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 NELFBQ8WX92 580 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 WNK4Q96J92 1243 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 P2RX7Q99572 595 aaKnown RBP19.56■□□□□ 0.72
PCF11-207ENST00000624931 NUP58Q9BVL2 599 aa19.56■□□□□ 0.72
PCF11-207ENST00000624931 NDUFA10O95299 355 aa19.55■□□□□ 0.72
PCF11-207ENST00000624931 CLK2P49760 499 aaKnown RBP19.55■□□□□ 0.72
PCF11-207ENST00000624931 PTGDRQ13258 359 aa19.55■□□□□ 0.72
PCF11-207ENST00000624931 STIM1Q13586 685 aa19.55■□□□□ 0.72
PCF11-207ENST00000624931 IQCEQ6IPM2 695 aa19.55■□□□□ 0.72
PCF11-207ENST00000624931 TRAPPC11Q7Z392 1133 aa19.55■□□□□ 0.72
PCF11-207ENST00000624931 ACRBPQ8NEB7 543 aa19.55■□□□□ 0.72
PCF11-207ENST00000624931 TBCKQ8TEA7 893 aa19.55■□□□□ 0.72
PCF11-207ENST00000624931 RUBCNQ92622 972 aa19.55■□□□□ 0.72
PCF11-207ENST00000624931 OTUD5Q96G74 571 aa19.55■□□□□ 0.72
PCF11-207ENST00000624931 RLFQ13129 1914 aa19.55■□□□□ 0.72
PCF11-207ENST00000624931 PPP1R2P41236 205 aa19.54■□□□□ 0.72
PCF11-207ENST00000624931 VSNL1P62760 191 aa19.54■□□□□ 0.72
PCF11-207ENST00000624931 KCNB1Q14721 858 aa19.54■□□□□ 0.72
PCF11-207ENST00000624931 C12orf42Q96LP6 360 aa19.54■□□□□ 0.72
PCF11-207ENST00000624931 AGBL1Q96MI9 1066 aa19.54■□□□□ 0.72
PCF11-207ENST00000624931 THAP9Q9H5L6 903 aa19.54■□□□□ 0.72
PCF11-207ENST00000624931 ZNF536O15090 1300 aa19.54■□□□□ 0.72
PCF11-207ENST00000624931 EDIL3O43854 480 aa19.54■□□□□ 0.72
PCF11-207ENST00000624931 RPN1P04843 607 aaKnown RBP19.54■□□□□ 0.72
PCF11-207ENST00000624931 CCT6AP40227 531 aaKnown RBP19.54■□□□□ 0.72
PCF11-207ENST00000624931 LETM2Q2VYF4 491 aa19.54■□□□□ 0.72
PCF11-207ENST00000624931 PAPD7Q5XG87 772 aaKnown RBP19.54■□□□□ 0.72
PCF11-207ENST00000624931 SRLQ86TD4 932 aa19.54■□□□□ 0.72
PCF11-207ENST00000624931 ATG4CQ96DT6 458 aa19.54■□□□□ 0.72
PCF11-207ENST00000624931 DNAJC7Q99615 494 aa19.54■□□□□ 0.72
PCF11-207ENST00000624931 PPP1R9AQ9ULJ8 1098 aa19.54■□□□□ 0.72
PCF11-207ENST00000624931 CAPN11Q9UMQ6 739 aa19.54■□□□□ 0.72
PCF11-207ENST00000624931 LUC7L2Q9Y383 392 aaKnown RBP19.54■□□□□ 0.72
PCF11-207ENST00000624931 MEIS2O14770 477 aa19.53■□□□□ 0.72
PCF11-207ENST00000624931 RHOXF2BP0C7M4 288 aa19.53■□□□□ 0.72
PCF11-207ENST00000624931 HOXA13P31271 388 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms