RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 ADAMTS5Q9UNA0 930 aa20.59■□□□□ 0.89
PCDHB2-202ENST00000622947 C19orf81C9J6K1 198 aa20.59■□□□□ 0.89
PCDHB2-202ENST00000622947 ITGB5P18084 799 aa20.59■□□□□ 0.89
PCDHB2-202ENST00000622947 RPS6P62753 249 aaKnown RBP20.59■□□□□ 0.89
PCDHB2-202ENST00000622947 TTI2Q6NXR4 508 aa20.59■□□□□ 0.89
PCDHB2-202ENST00000622947 GLIS3Q8NEA6 775 aa20.59■□□□□ 0.89
PCDHB2-202ENST00000622947 SLC5A5Q92911 643 aa20.59■□□□□ 0.89
PCDHB2-202ENST00000622947 ADD3Q9UEY8 706 aaKnown RBP20.59■□□□□ 0.89
PCDHB2-202ENST00000622947 NPHP3-ACAD11A0A0J9YXS1 232 aa20.58■□□□□ 0.89
PCDHB2-202ENST00000622947 ZBED4O75132 1171 aa20.58■□□□□ 0.89
PCDHB2-202ENST00000622947 PLA2G4BP0C869 781 aa20.58■□□□□ 0.89
PCDHB2-202ENST00000622947 RPA1P27694 616 aa20.58■□□□□ 0.89
PCDHB2-202ENST00000622947 CREBRFQ8IUR6 639 aa20.58■□□□□ 0.89
PCDHB2-202ENST00000622947 SULF1Q8IWU6 871 aa20.58■□□□□ 0.89
PCDHB2-202ENST00000622947 TRERF1Q96PN7 1200 aa20.58■□□□□ 0.89
PCDHB2-202ENST00000622947 RGL1Q9NZL6 768 aa20.58■□□□□ 0.89
PCDHB2-202ENST00000622947 PVALEFA0A1B0GWK0 134 aa20.58■□□□□ 0.88
PCDHB2-202ENST00000622947 DSG3P32926 999 aa20.58■□□□□ 0.88
PCDHB2-202ENST00000622947 SLC12A3P55017 1021 aa20.58■□□□□ 0.88
PCDHB2-202ENST00000622947 CYP4A11Q02928 519 aa20.58■□□□□ 0.88
PCDHB2-202ENST00000622947 GOLGA8FQ08AF8 430 aa20.58■□□□□ 0.88
PCDHB2-202ENST00000622947 GOLGA8DPQ0D2H9 430 aa20.58■□□□□ 0.88
PCDHB2-202ENST00000622947 ARSHQ5FYA8 562 aa20.58■□□□□ 0.88
PCDHB2-202ENST00000622947 CATSPERGQ6ZRH7 1159 aa20.58■□□□□ 0.88
PCDHB2-202ENST00000622947 TAAR1Q96RJ0 339 aa20.58■□□□□ 0.88
PCDHB2-202ENST00000622947 DUSP9Q99956 384 aaKnown RBP20.58■□□□□ 0.88
PCDHB2-202ENST00000622947 ZNF214Q9UL59 606 aaPredicted RBP20.58■□□□□ 0.88
PCDHB2-202ENST00000622947 SSBP05455 408 aaKnown RBP eCLIP20.57■□□□□ 0.88
PCDHB2-202ENST00000622947 MRPS9P82933 396 aaKnown RBP20.57■□□□□ 0.88
PCDHB2-202ENST00000622947 KRT26Q7Z3Y9 468 aa20.57■□□□□ 0.88
PCDHB2-202ENST00000622947 EEF2KMTQ96G04 330 aa20.57■□□□□ 0.88
PCDHB2-202ENST00000622947 IDEP14735 1019 aa20.57■□□□□ 0.88
PCDHB2-202ENST00000622947 CYP11B2P19099 503 aa20.57■□□□□ 0.88
PCDHB2-202ENST00000622947 GSDMDP57764 484 aa20.57■□□□□ 0.88
PCDHB2-202ENST00000622947 MAP3K9P80192 1104 aa20.57■□□□□ 0.88
PCDHB2-202ENST00000622947 TMEM132BQ14DG7 1078 aa20.57■□□□□ 0.88
PCDHB2-202ENST00000622947 KRT31Q15323 416 aa20.57■□□□□ 0.88
PCDHB2-202ENST00000622947 TPD52L1Q16890 204 aaPredicted RBP20.57■□□□□ 0.88
PCDHB2-202ENST00000622947 LRCH2Q5VUJ6 765 aa20.57■□□□□ 0.88
PCDHB2-202ENST00000622947 MOB2Q70IA6 237 aa20.57■□□□□ 0.88
PCDHB2-202ENST00000622947 MCF2L2Q86YR7 1114 aa20.57■□□□□ 0.88
PCDHB2-202ENST00000622947 EIF2AK1Q9BQI3 630 aaKnown RBP20.57■□□□□ 0.88
PCDHB2-202ENST00000622947 MXRA8Q9BRK3 442 aa20.57■□□□□ 0.88
PCDHB2-202ENST00000622947 LRRC10BA6NIK2 292 aa20.56■□□□□ 0.88
PCDHB2-202ENST00000622947 TBX2Q13207 712 aaPredicted RBP20.56■□□□□ 0.88
PCDHB2-202ENST00000622947 COG2Q14746 738 aa20.56■□□□□ 0.88
PCDHB2-202ENST00000622947 HAUS3Q68CZ6 603 aa20.56■□□□□ 0.88
PCDHB2-202ENST00000622947 ANKRD40Q6AI12 368 aa20.56■□□□□ 0.88
PCDHB2-202ENST00000622947 L3MBTL3Q96JM7 780 aaPredicted RBP20.56■□□□□ 0.88
PCDHB2-202ENST00000622947 HSD17B14Q9BPX1 270 aa20.56■□□□□ 0.88
PCDHB2-202ENST00000622947 WDR11Q9BZH6 1224 aa20.56■□□□□ 0.88
PCDHB2-202ENST00000622947 SEMA6BQ9H3T3 888 aa20.56■□□□□ 0.88
PCDHB2-202ENST00000622947 EHMT1Q9H9B1 1298 aa20.56■□□□□ 0.88
PCDHB2-202ENST00000622947 PAXBP1Q9Y5B6 917 aa20.56■□□□□ 0.88
PCDHB2-202ENST00000622947 PSMA7O14818 248 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 SLC26A4O43511 780 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 SKILP12757 684 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 CACNB1Q02641 598 aaPredicted RBP20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 PPP2R5CQ13362 524 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 COBLL1Q53SF7 1204 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 TCP11X2Q5H9J9 407 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 SH3D19Q5HYK7 790 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 B3GNT9Q6UX72 402 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 DHTKD1Q96HY7 919 aaPredicted RBP20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 FGFBP2Q9BYJ0 223 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 LIMA1Q9UHB6 759 aaKnown RBP20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 FRMPD4Q14CM0 1322 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 CHMP2AO43633 222 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 PBX1P40424 430 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 RAD51AP2Q09MP3 1159 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 TREML2Q5T2D2 321 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 ILDR2Q71H61 639 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 GPBP1Q86WP2 473 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 P2RX5Q93086 422 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 CCDC47Q96A33 483 aaKnown RBP20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 ZNF577Q9BSK1 485 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 FAM53CQ9NYF3 392 aa20.55■□□□□ 0.88
PCDHB2-202ENST00000622947 KCNJ18B7U540 433 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 PEX10O60683 326 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 SLITRK3O94933 977 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 CAPN2P17655 700 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 CCNE1P24864 410 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 COASYQ13057 564 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 PABPC4Q13310 644 aaKnown RBP eCLIP20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 STIM1Q13586 685 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 KCNJ12Q14500 433 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 SNRNP48Q6IEG0 339 aaKnown RBP20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 ERMNQ8TAM6 284 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 CLMNQ96JQ2 1002 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 POLR3CQ9BUI4 534 aaPredicted RBP20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 SRRTQ9BXP5 876 aaKnown RBP20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 UNC45AQ9H3U1 944 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 RNF146Q9NTX7 359 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 CTDP1Q9Y5B0 961 aaPredicted RBP20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 SPDYE16A6NNV3 312 aaPredicted RBP20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 IPO5O00410 1097 aaKnown RBP20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 NKRFO15226 690 aaKnown RBP eCLIP20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 FDX1P10109 184 aa20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 EIF2AK2P19525 551 aaKnown RBP20.54■□□□□ 0.88
PCDHB2-202ENST00000622947 CTTNQ14247 550 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms