RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 ENC1O14682 589 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 PLCG1P19174 1290 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 EEF1GP26641 437 aaKnown RBP13.68□□□□□ -0.22
LITAF-221ENST00000622633 PIP4K2BP78356 416 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 MYO1EQ12965 1108 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 TSR1Q2NL82 804 aaKnown RBP13.68□□□□□ -0.22
LITAF-221ENST00000622633 WDR93Q6P2C0 686 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 WDR59Q6PJI9 974 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 MICALCLQ6ZW33 695 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 GALNT15Q8N3T1 639 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 CCDC148Q8NFR7 591 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 STAMBPL1Q96FJ0 436 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 DNAJC7Q99615 494 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 DUSP9Q99956 384 aaKnown RBP13.68□□□□□ -0.22
LITAF-221ENST00000622633 ANKIB1Q9P2G1 1089 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 HDAC6Q9UBN7 1215 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 NARFQ9UHQ1 456 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 CAPN11Q9UMQ6 739 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 WNK3Q9BYP7 1800 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 KDM4FA0A1W2PPD8 638 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 A0A1W2PQC6 194 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 PALM3A6NDB9 673 aaPredicted RBP13.68□□□□□ -0.22
LITAF-221ENST00000622633 KLK7P49862 253 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 HERVK_113P62684 666 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 TUBB4BP68371 445 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 SFSWAPQ12872 951 aaKnown RBP13.68□□□□□ -0.22
LITAF-221ENST00000622633 TXNRD1Q16881 649 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 GNPTABQ3T906 1256 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 TPTE2Q6XPS3 522 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 CABP7Q86V35 215 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 MAPKAPK5Q8IW41 473 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 CSGALNACT2Q8N6G5 542 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 DAGLBQ8NCG7 672 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 CUL5Q93034 780 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 GPR101Q96P66 508 aaPredicted RBP13.68□□□□□ -0.22
LITAF-221ENST00000622633 TSC22D3Q99576 134 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 AGPAT5Q9NUQ2 364 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 NUB1Q9Y5A7 615 aa13.68□□□□□ -0.22
LITAF-221ENST00000622633 COL22A1Q8NFW1 1626 aaPredicted RBP13.67□□□□□ -0.22
LITAF-221ENST00000622633 KLRF2D3W0D1 207 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 ZPR1O75312 459 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 TUBBP07437 444 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 MPP3Q13368 585 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 LETM2Q2VYF4 491 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 GALNT17Q6IS24 598 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 SDR16C5Q8N3Y7 309 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 TUBGCP2Q9BSJ2 902 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 IRS2Q9Y4H2 1338 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 RASSF10A6NK89 507 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 OPLAHO14841 1288 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 MGRN1O60291 552 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 CCNT1O60563 726 aaKnown RBP13.67□□□□□ -0.22
LITAF-221ENST00000622633 DNM2P50570 870 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 PDE4DQ08499 809 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 DRP2Q13474 957 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 MYBPC3Q14896 1274 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 CCDC122Q5T0U0 273 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 ANKRD40Q6AI12 368 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 DHTKD1Q96HY7 919 aaPredicted RBP13.67□□□□□ -0.22
LITAF-221ENST00000622633 AGAP3Q96P47 875 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 VAT1LQ9HCJ6 419 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 HAUS2Q9NVX0 235 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 C15orf41Q9Y2V0 281 aa13.67□□□□□ -0.22
LITAF-221ENST00000622633 LIN7AO14910 233 aaPredicted RBP13.66□□□□□ -0.22
LITAF-221ENST00000622633 GNPATO15228 680 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 SRGAP2O75044 1071 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 SRGNP10124 158 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 RASA1P20936 1047 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 NAPAP54920 295 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 STK4Q13043 487 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 FAM98CQ17RN3 349 aaKnown RBP13.66□□□□□ -0.22
LITAF-221ENST00000622633 BARGINQ6ZT62 677 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 WDR66Q8TBY9 1149 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 C17orf50Q8WW18 174 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 ZNF570Q96NI8 536 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 HAUS4Q9H6D7 363 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 KIAA1551Q9HCM1 1747 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 TCP11L1Q9NUJ3 509 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 EXOC1Q9NV70 894 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 FLT1P17948 1338 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 CNTNAP4Q9C0A0 1308 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 BAG3O95817 575 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 ATP1A1P05023 1023 aaKnown RBP13.66□□□□□ -0.22
LITAF-221ENST00000622633 OR52Z1P0C646 297 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 FCER1AP12319 257 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 TRIM21P19474 475 aaKnown RBP13.66□□□□□ -0.22
LITAF-221ENST00000622633 TECP42680 631 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 ASIC1P78348 528 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 USP17L2Q6R6M4 530 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 TRAPPC11Q7Z392 1133 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 COG1Q8WTW3 980 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 P2RX5Q93086 422 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 HPS3Q969F9 1004 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 PCMTD1Q96MG8 357 aaPredicted RBP13.66□□□□□ -0.22
LITAF-221ENST00000622633 TRIM9Q9C026 710 aa13.66□□□□□ -0.22
LITAF-221ENST00000622633 SMCO2A6NFE2 343 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 PSMD14O00487 310 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 LAD1O00515 517 aa13.65□□□□□ -0.22
LITAF-221ENST00000622633 NKRFO15226 690 aaKnown RBP eCLIP13.65□□□□□ -0.22
LITAF-221ENST00000622633 RPS6KA4O75676 772 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms