RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 PDCD2LQ9BRP1 358 aa23.97■■□□□ 1.43
SPAST-204ENST00000621856 POLR3CQ9BUI4 534 aaPredicted RBP23.97■■□□□ 1.43
SPAST-204ENST00000621856 BMP2KQ9NSY1 1161 aaPredicted RBP23.97■■□□□ 1.43
SPAST-204ENST00000621856 A0A0G2JMZ2 1700 aa23.97■■□□□ 1.43
SPAST-204ENST00000621856 TRAF5O00463 557 aa23.96■■□□□ 1.43
SPAST-204ENST00000621856 SPATA31C1P0DKV0 1188 aa23.96■■□□□ 1.43
SPAST-204ENST00000621856 IDEP14735 1019 aa23.96■■□□□ 1.43
SPAST-204ENST00000621856 MSNP26038 577 aaKnown RBP23.96■■□□□ 1.43
SPAST-204ENST00000621856 UBASH3AP57075 661 aa23.96■■□□□ 1.43
SPAST-204ENST00000621856 MRPS9P82933 396 aaKnown RBP23.96■■□□□ 1.43
SPAST-204ENST00000621856 CYP4A11Q02928 519 aa23.96■■□□□ 1.43
SPAST-204ENST00000621856 MB21D1Q8N884 522 aa23.96■■□□□ 1.43
SPAST-204ENST00000621856 PURBQ96QR8 312 aaKnown RBP23.96■■□□□ 1.43
SPAST-204ENST00000621856 JADE2Q9NQC1 790 aa23.96■■□□□ 1.43
SPAST-204ENST00000621856 SAMSN1Q9NSI8 373 aaKnown RBP23.96■■□□□ 1.43
SPAST-204ENST00000621856 DNM3Q9UQ16 869 aa23.96■■□□□ 1.43
SPAST-204ENST00000621856 ZNF18P17022 549 aa23.96■■□□□ 1.43
SPAST-204ENST00000621856 LDLRAD1Q5T700 205 aa23.96■■□□□ 1.43
SPAST-204ENST00000621856 LBX2Q6XYB7 198 aa23.96■■□□□ 1.43
SPAST-204ENST00000621856 RIT2Q99578 217 aa23.96■■□□□ 1.43
SPAST-204ENST00000621856 KCNH7Q9NS40 1196 aa23.96■■□□□ 1.43
SPAST-204ENST00000621856 PKD2L1Q9P0L9 805 aa23.96■■□□□ 1.43
SPAST-204ENST00000621856 AGTPBP1Q9UPW5 1226 aa23.96■■□□□ 1.43
SPAST-204ENST00000621856 ZKSCAN5Q9Y2L8 839 aa23.96■■□□□ 1.43
SPAST-204ENST00000621856 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.96■■□□□ 1.43
SPAST-204ENST00000621856 PSMA7O14818 248 aa23.95■■□□□ 1.42
SPAST-204ENST00000621856 COBLO75128 1261 aa23.95■■□□□ 1.42
SPAST-204ENST00000621856 CCND2P30279 289 aa23.95■■□□□ 1.42
SPAST-204ENST00000621856 MTMR1Q13613 665 aa23.95■■□□□ 1.42
SPAST-204ENST00000621856 CCDC186Q7Z3E2 898 aa23.95■■□□□ 1.42
SPAST-204ENST00000621856 GPBP1Q86WP2 473 aa23.95■■□□□ 1.42
SPAST-204ENST00000621856 CHST13Q8NET6 341 aa23.95■■□□□ 1.42
SPAST-204ENST00000621856 SLC10A4Q96EP9 437 aa23.95■■□□□ 1.42
SPAST-204ENST00000621856 UNC45AQ9H3U1 944 aa23.95■■□□□ 1.42
SPAST-204ENST00000621856 TUFT1Q9NNX1 390 aa23.95■■□□□ 1.42
SPAST-204ENST00000621856 A1CFQ9NQ94 594 aaKnown RBP23.95■■□□□ 1.42
SPAST-204ENST00000621856 CYP39A1Q9NYL5 469 aa23.95■■□□□ 1.42
SPAST-204ENST00000621856 NRBP1Q9UHY1 535 aa23.95■■□□□ 1.42
SPAST-204ENST00000621856 PTGS1P23219 599 aa23.94■■□□□ 1.42
SPAST-204ENST00000621856 PPP1R2P41236 205 aa23.94■■□□□ 1.42
SPAST-204ENST00000621856 ZNF830Q96NB3 372 aaPredicted RBP23.94■■□□□ 1.42
SPAST-204ENST00000621856 ASCC2Q9H1I8 757 aaPredicted RBP23.94■■□□□ 1.42
SPAST-204ENST00000621856 AGO4Q9HCK5 861 aaKnown RBP23.94■■□□□ 1.42
SPAST-204ENST00000621856 RGL1Q9NZL6 768 aa23.94■■□□□ 1.42
SPAST-204ENST00000621856 DDX39AO00148 427 aaKnown RBP23.93■■□□□ 1.42
SPAST-204ENST00000621856 FCER1AP12319 257 aa23.93■■□□□ 1.42
SPAST-204ENST00000621856 XRRA1Q6P2D8 792 aa23.93■■□□□ 1.42
SPAST-204ENST00000621856 FASTKD5Q7L8L6 764 aaKnown RBP23.93■■□□□ 1.42
SPAST-204ENST00000621856 FAM43AQ8N2R8 423 aa23.93■■□□□ 1.42
SPAST-204ENST00000621856 DYDC2Q96IM9 177 aa23.93■■□□□ 1.42
SPAST-204ENST00000621856 MAF1Q9H063 256 aa23.93■■□□□ 1.42
SPAST-204ENST00000621856 RRAGCQ9HB90 399 aa23.93■■□□□ 1.42
SPAST-204ENST00000621856 BTBD7Q9P203 1132 aa23.93■■□□□ 1.42
SPAST-204ENST00000621856 KRT18P05783 430 aaKnown RBP23.93■■□□□ 1.42
SPAST-204ENST00000621856 SLC12A3P55017 1021 aa23.93■■□□□ 1.42
SPAST-204ENST00000621856 PSMC6P62333 389 aa23.93■■□□□ 1.42
SPAST-204ENST00000621856 STK4Q13043 487 aa23.93■■□□□ 1.42
SPAST-204ENST00000621856 PABPC4Q13310 644 aaKnown RBP eCLIP23.93■■□□□ 1.42
SPAST-204ENST00000621856 CTTNQ14247 550 aaKnown RBP23.93■■□□□ 1.42
SPAST-204ENST00000621856 NSUN6Q8TEA1 469 aaKnown RBP23.93■■□□□ 1.42
SPAST-204ENST00000621856 DNAJC19Q96DA6 116 aa23.93■■□□□ 1.42
SPAST-204ENST00000621856 DHTKD1Q96HY7 919 aaPredicted RBP23.93■■□□□ 1.42
SPAST-204ENST00000621856 PAGR1Q9BTK6 254 aa23.93■■□□□ 1.42
SPAST-204ENST00000621856 NR3C2P08235 984 aa23.92■■□□□ 1.42
SPAST-204ENST00000621856 CYP11B2P19099 503 aa23.92■■□□□ 1.42
SPAST-204ENST00000621856 EPHA7Q15375 998 aa23.92■■□□□ 1.42
SPAST-204ENST00000621856 RIOX2Q8IUF8 465 aa23.92■■□□□ 1.42
SPAST-204ENST00000621856 TPH2Q8IWU9 490 aa23.92■■□□□ 1.42
SPAST-204ENST00000621856 KCTD17Q8N5Z5 321 aa23.92■■□□□ 1.42
SPAST-204ENST00000621856 HPS3Q969F9 1004 aa23.92■■□□□ 1.42
SPAST-204ENST00000621856 SLC39A2Q9NP94 309 aa23.92■■□□□ 1.42
SPAST-204ENST00000621856 PANK4Q9NVE7 773 aa23.92■■□□□ 1.42
SPAST-204ENST00000621856 TESPA1A2RU30 521 aaPredicted RBP23.91■■□□□ 1.42
SPAST-204ENST00000621856 PEX10O60683 326 aa23.91■■□□□ 1.42
SPAST-204ENST00000621856 OSBPP22059 807 aa23.91■■□□□ 1.42
SPAST-204ENST00000621856 HERVK_113P62684 666 aa23.91■■□□□ 1.42
SPAST-204ENST00000621856 CDKAL1Q5VV42 579 aa23.91■■□□□ 1.42
SPAST-204ENST00000621856 TMC6Q7Z403 805 aa23.91■■□□□ 1.42
SPAST-204ENST00000621856 FILIP1Q7Z7B0 1213 aa23.91■■□□□ 1.42
SPAST-204ENST00000621856 CCDC65Q8IXS2 484 aa23.91■■□□□ 1.42
SPAST-204ENST00000621856 SYT2Q8N9I0 419 aaPredicted RBP23.91■■□□□ 1.42
SPAST-204ENST00000621856 HSD17B14Q9BPX1 270 aa23.91■■□□□ 1.42
SPAST-204ENST00000621856 SPATC1LQ9H0A9 340 aa23.91■■□□□ 1.42
SPAST-204ENST00000621856 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.91■■□□□ 1.42
SPAST-204ENST00000621856 FBXO40Q9UH90 709 aa23.91■■□□□ 1.42
SPAST-204ENST00000621856 GJA5P36382 358 aa23.9■■□□□ 1.42
SPAST-204ENST00000621856 PSMD2Q13200 908 aa23.9■■□□□ 1.42
SPAST-204ENST00000621856 SNAPC2Q13487 334 aa23.9■■□□□ 1.42
SPAST-204ENST00000621856 CCDC144BQ3MJ40 725 aa23.9■■□□□ 1.42
SPAST-204ENST00000621856 MIER3Q7Z3K6 550 aa23.9■■□□□ 1.42
SPAST-204ENST00000621856 VSIG10LQ86VR7 867 aa23.9■■□□□ 1.42
SPAST-204ENST00000621856 ANKRD35Q8N283 1001 aa23.9■■□□□ 1.42
SPAST-204ENST00000621856 KIAA0895Q8NCT3 520 aa23.9■■□□□ 1.42
SPAST-204ENST00000621856 NAP1L5Q96NT1 182 aaPredicted RBP23.9■■□□□ 1.42
SPAST-204ENST00000621856 NPHP3-ACAD11A0A0J9YXS1 232 aa23.9■■□□□ 1.42
SPAST-204ENST00000621856 TRIM49BA6NDI0 452 aa23.9■■□□□ 1.42
SPAST-204ENST00000621856 SLITRK3O94933 977 aa23.9■■□□□ 1.42
SPAST-204ENST00000621856 EYA4O95677 639 aa23.9■■□□□ 1.42
SPAST-204ENST00000621856 COASYQ13057 564 aa23.9■■□□□ 1.42
SPAST-204ENST00000621856 ITGB3BPQ13352 177 aaPredicted RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms