RNA–Protein interactions for RNA: ENST00000620859.4

LINC01515-217, Transcript of long intergenic non-protein coding RNA 1515, human

TSL 5 BASIC

Gene LINC01515, Length 694 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01515-217	ENST00000620859	CYP4F22	Q6NT55	531 aa		5.73	□□□□□ -1.49
LINC01515-217	ENST00000620859	TMC5	Q6UXY8	1006 aa		5.73	□□□□□ -1.49
LINC01515-217	ENST00000620859	SPRED1	Q7Z699	444 aa		5.73	□□□□□ -1.49
LINC01515-217	ENST00000620859	KBTBD2	Q8IY47	623 aa		5.73	□□□□□ -1.49
LINC01515-217	ENST00000620859	KLHL36	Q8N4N3	616 aa		5.73	□□□□□ -1.49
LINC01515-217	ENST00000620859	SLC16A11	Q8NCK7	471 aa		5.73	□□□□□ -1.49
LINC01515-217	ENST00000620859	EPN3	Q9H201	632 aa		5.73	□□□□□ -1.49
LINC01515-217	ENST00000620859	RBPJL	Q9UBG7	517 aa		5.73	□□□□□ -1.49
LINC01515-217	ENST00000620859		A0A1W2PQU0	124 aa		5.72	□□□□□ -1.49
LINC01515-217	ENST00000620859	PPP2R2A	P63151	447 aa		5.72	□□□□□ -1.49
LINC01515-217	ENST00000620859	NFATC3	Q12968	1075 aa		5.72	□□□□□ -1.49
LINC01515-217	ENST00000620859	KRTAP5-3	Q6L8H2	238 aa		5.72	□□□□□ -1.49
LINC01515-217	ENST00000620859	EEPD1	Q7L9B9	569 aa		5.72	□□□□□ -1.49
LINC01515-217	ENST00000620859	TTLL11	Q8NHH1	800 aa		5.72	□□□□□ -1.49
LINC01515-217	ENST00000620859	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	5.72	□□□□□ -1.49
LINC01515-217	ENST00000620859	KISS1R	Q969F8	398 aa	Predicted RBP	5.72	□□□□□ -1.49
LINC01515-217	ENST00000620859	JAM3	Q9BX67	310 aa		5.72	□□□□□ -1.49
LINC01515-217	ENST00000620859	SLC6A20	Q9NP91	592 aa		5.72	□□□□□ -1.49
LINC01515-217	ENST00000620859	GPR27	Q9NS67	375 aa		5.72	□□□□□ -1.49
LINC01515-217	ENST00000620859	FTSJ1	Q9UET6	329 aa		5.72	□□□□□ -1.49
LINC01515-217	ENST00000620859	DLX3	O60479	287 aa		5.71	□□□□□ -1.5
LINC01515-217	ENST00000620859	MAFK	O60675	156 aa		5.71	□□□□□ -1.5
LINC01515-217	ENST00000620859	MSC	O60682	206 aa		5.71	□□□□□ -1.5
LINC01515-217	ENST00000620859	FSHB	P01225	129 aa		5.71	□□□□□ -1.5
LINC01515-217	ENST00000620859	TRMT10B	Q6PF06	316 aa	Known RBP	5.71	□□□□□ -1.5
LINC01515-217	ENST00000620859	ARHGEF18	Q6ZSZ5	1173 aa		5.71	□□□□□ -1.5
LINC01515-217	ENST00000620859	CIR1	Q86X95	450 aa	Predicted RBP	5.71	□□□□□ -1.5
LINC01515-217	ENST00000620859	TRIM48	Q8IWZ4	208 aa		5.71	□□□□□ -1.5
LINC01515-217	ENST00000620859	PIP4K2C	Q8TBX8	421 aa		5.71	□□□□□ -1.5
LINC01515-217	ENST00000620859	CLEC4D	Q8WXI8	215 aa		5.71	□□□□□ -1.5
LINC01515-217	ENST00000620859	KCTD13	Q8WZ19	329 aa		5.71	□□□□□ -1.5
LINC01515-217	ENST00000620859	PTPN18	Q99952	460 aa		5.71	□□□□□ -1.5
LINC01515-217	ENST00000620859	KLC2	Q9H0B6	622 aa		5.71	□□□□□ -1.5
LINC01515-217	ENST00000620859	ZNF408	Q9H9D4	720 aa		5.71	□□□□□ -1.5
LINC01515-217	ENST00000620859	PPARGC1A	Q9UBK2	798 aa	Known RBP	5.71	□□□□□ -1.5
LINC01515-217	ENST00000620859	KRIT1	O00522	736 aa		5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	SLC27A2	O14975	620 aa		5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	B4GALT4	O60513	344 aa		5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	FGR	P09769	529 aa		5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	C6	P13671	934 aa		5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	ERCC5	P28715	1186 aa	Predicted RBP	5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	SLFN13	Q68D06	897 aa		5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859		Q8N1X5	172 aa		5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	DTX3	Q8N9I9	347 aa		5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	NUDT10	Q8NFP7	164 aa		5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	NUDT11	Q96G61	164 aa		5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	WWC2-AS2	Q96NR7	200 aa		5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	IER2	Q9BTL4	223 aa		5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	PDGFD	Q9GZP0	370 aa	Predicted RBP	5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	BARX1	Q9HBU1	254 aa	Predicted RBP	5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	SRRD	Q9UH36	339 aa		5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	ADAM29	Q9UKF5	820 aa		5.7	□□□□□ -1.5
LINC01515-217	ENST00000620859	PATE3	B3GLJ2	98 aa		5.69	□□□□□ -1.5
LINC01515-217	ENST00000620859	AGRP	O00253	132 aa		5.69	□□□□□ -1.5
LINC01515-217	ENST00000620859	KLHL18	O94889	574 aa		5.69	□□□□□ -1.5
LINC01515-217	ENST00000620859	TACR2	P21452	398 aa		5.69	□□□□□ -1.5
LINC01515-217	ENST00000620859	GRIN1	Q05586	938 aa		5.69	□□□□□ -1.5
LINC01515-217	ENST00000620859	CRIP3	Q6Q6R5	217 aa		5.69	□□□□□ -1.5
LINC01515-217	ENST00000620859	RSPO2	Q6UXX9	243 aa	Predicted RBP	5.69	□□□□□ -1.5
LINC01515-217	ENST00000620859	SORCS2	Q96PQ0	1159 aa		5.69	□□□□□ -1.5
LINC01515-217	ENST00000620859	CDK5RAP1	Q96SZ6	601 aa	Known RBP	5.69	□□□□□ -1.5
LINC01515-217	ENST00000620859	PHF20	Q9BVI0	1012 aa		5.69	□□□□□ -1.5
LINC01515-217	ENST00000620859	SCAND2P	Q9GZW5	306 aa	Predicted RBP	5.69	□□□□□ -1.5
LINC01515-217	ENST00000620859	MEGF9	Q9H1U4	602 aa		5.69	□□□□□ -1.5
LINC01515-217	ENST00000620859	DLL4	Q9NR61	685 aa		5.69	□□□□□ -1.5
LINC01515-217	ENST00000620859	ZDHHC9	Q9Y397	364 aa		5.69	□□□□□ -1.5
LINC01515-217	ENST00000620859	CHGB	P05060	677 aa		5.68	□□□□□ -1.5
LINC01515-217	ENST00000620859	R3HDM1	Q15032	1099 aa	Known RBP	5.68	□□□□□ -1.5
LINC01515-217	ENST00000620859	PHF19	Q5T6S3	580 aa		5.68	□□□□□ -1.5
LINC01515-217	ENST00000620859	VASN	Q6EMK4	673 aa		5.68	□□□□□ -1.5
LINC01515-217	ENST00000620859	OTOP3	Q7RTS5	596 aa		5.68	□□□□□ -1.5
LINC01515-217	ENST00000620859	RBM12B	Q8IXT5	1001 aa	Known RBP	5.68	□□□□□ -1.5
LINC01515-217	ENST00000620859	JADE2	Q9NQC1	790 aa		5.68	□□□□□ -1.5
LINC01515-217	ENST00000620859	KNG1	P01042	644 aa		5.67	□□□□□ -1.5
LINC01515-217	ENST00000620859	ACVRL1	P37023	503 aa		5.67	□□□□□ -1.5
LINC01515-217	ENST00000620859	TUSC3	Q13454	348 aa		5.67	□□□□□ -1.5
LINC01515-217	ENST00000620859	SMAD2	Q15796	467 aa	Known RBP	5.67	□□□□□ -1.5
LINC01515-217	ENST00000620859	HABP4	Q5JVS0	413 aa	Known RBP	5.67	□□□□□ -1.5
LINC01515-217	ENST00000620859	ZNF585A	Q6P3V2	769 aa		5.67	□□□□□ -1.5
LINC01515-217	ENST00000620859	LBX2	Q6XYB7	198 aa		5.67	□□□□□ -1.5
LINC01515-217	ENST00000620859		Q6ZUG5	572 aa		5.67	□□□□□ -1.5
LINC01515-217	ENST00000620859	USP53	Q70EK8	1073 aa		5.67	□□□□□ -1.5
LINC01515-217	ENST00000620859	MCF2L2	Q86YR7	1114 aa		5.67	□□□□□ -1.5
LINC01515-217	ENST00000620859	CELF2-AS1	Q8N7Q2	184 aa		5.67	□□□□□ -1.5
LINC01515-217	ENST00000620859	UHMK1	Q8TAS1	419 aa	Known RBP	5.67	□□□□□ -1.5
LINC01515-217	ENST00000620859	ZNF747	Q9BV97	191 aa		5.67	□□□□□ -1.5
LINC01515-217	ENST00000620859	DEF6	Q9H4E7	631 aa		5.67	□□□□□ -1.5
LINC01515-217	ENST00000620859	ZNF623	O75123	536 aa		5.66	□□□□□ -1.5
LINC01515-217	ENST00000620859	CNOT4	O95628	575 aa	Known RBP	5.66	□□□□□ -1.5
LINC01515-217	ENST00000620859	LTF	P02788	710 aa		5.66	□□□□□ -1.5
LINC01515-217	ENST00000620859	CKM	P06732	381 aa		5.66	□□□□□ -1.5
LINC01515-217	ENST00000620859	FAH	P16930	419 aa		5.66	□□□□□ -1.5
LINC01515-217	ENST00000620859	SELENOP	P49908	381 aa		5.66	□□□□□ -1.5
LINC01515-217	ENST00000620859	GNL2	Q13823	731 aa	Known RBP	5.66	□□□□□ -1.5
LINC01515-217	ENST00000620859	HSP90AA2P	Q14568	343 aa	Predicted RBP	5.66	□□□□□ -1.5
LINC01515-217	ENST00000620859	SKIDA1	Q1XH10	827 aa		5.66	□□□□□ -1.5
LINC01515-217	ENST00000620859	PAN2	Q504Q3	1202 aa	Known RBP	5.66	□□□□□ -1.5
LINC01515-217	ENST00000620859	DCAF4	Q8WV16	495 aa		5.66	□□□□□ -1.5
LINC01515-217	ENST00000620859	SGSM3	Q96HU1	749 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms