RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 FRMPD4Q14CM0 1322 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 ABHD14A-ACY1A0A1B0GW23 586 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 SPATA31C2B4DYI2 1134 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 H3BRB1 525 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 PRC1O43663 620 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 DDAH1O94760 285 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 PLEKHA8P1O95397 391 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 LGALS2P05162 132 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 ICAM3P32942 547 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 THPOP40225 353 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 TFF2Q03403 129 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 GRB10Q13322 594 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 SKIV2LQ15477 1246 aaKnown RBP12.88□□□□□ -0.35
TARDBP-221ENST00000619555 GNPTABQ3T906 1256 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 FAM117BQ6P1L5 589 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 CYFIP1Q7L576 1253 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 SERINC5Q86VE9 423 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 CMTR1Q8N1G2 835 aaKnown RBP12.88□□□□□ -0.35
TARDBP-221ENST00000619555 CTCFLQ8NI51 663 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-221ENST00000619555 RRP36Q96EU6 259 aaKnown RBP12.88□□□□□ -0.35
TARDBP-221ENST00000619555 INPP4AQ96PE3 977 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-221ENST00000619555 MAP3K14Q99558 947 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 SPZ1Q9BXG8 430 aa12.88□□□□□ -0.35
TARDBP-221ENST00000619555 LSG1Q9H089 658 aaKnown RBP12.88□□□□□ -0.35
TARDBP-221ENST00000619555 TUT1Q9H6E5 874 aaKnown RBP12.88□□□□□ -0.35
TARDBP-221ENST00000619555 XIRP2A4UGR9 3374 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 C17orf102A2RUQ5 167 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 RSPH10B2B2RC85 870 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 NOP56O00567 594 aaKnown RBP12.87□□□□□ -0.35
TARDBP-221ENST00000619555 SH2B2O14492 632 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-221ENST00000619555 MEIS2O14770 477 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 TREHO43280 583 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 LPXNO60711 386 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 LGR5O75473 907 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 GJB5O95377 273 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 RSPH10BP0C881 870 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 SMIM10L2AP0DMW4 78 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 SMIM10L2BP0DMW5 78 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 RXRAP19793 462 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 IKBKEQ14164 716 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 NEDD9Q14511 834 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 CASC1Q6TDU7 716 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 METTL7BQ6UX53 244 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.87□□□□□ -0.358e-12■■■■■ 35.2
TARDBP-221ENST00000619555 NFXL1Q6ZNB6 911 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 RAB11FIP4Q86YS3 637 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 SRBD1Q8N5C6 995 aaKnown RBP12.87□□□□□ -0.35
TARDBP-221ENST00000619555 DBF4BQ8NFT6 615 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 SMARCC2Q8TAQ2 1214 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 ATP6V0A1Q93050 837 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 NECAB3Q96P71 396 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-221ENST00000619555 UHRF1Q96T88 793 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-221ENST00000619555 GPR20Q99678 358 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 RNPEPQ9H4A4 650 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 KAT6AQ92794 2004 aa12.87□□□□□ -0.35
TARDBP-221ENST00000619555 hCG_1642624A0A1W2PR95 340 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 SLC27A2O14975 620 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 FIBPO43427 364 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 STAM2O75886 525 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 BMP1P13497 986 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 SMARCA1P28370 1054 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 HOXC8P31273 242 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 KIF5BP33176 963 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 MCM5P33992 734 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 KCNQ1P51787 676 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 SP4Q02446 784 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 UTP14CQ5TAP6 766 aaKnown RBP12.86□□□□□ -0.35
TARDBP-221ENST00000619555 TRIM50Q86XT4 487 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 IL27Q8NEV9 243 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 CUL5Q93034 780 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 RAD9AQ99638 391 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 LZTS2Q9BRK4 669 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 ESYT1Q9BSJ8 1104 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 LRRC2Q9BYS8 371 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 OSBPL7Q9BZF2 842 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 SETD4Q9NVD3 440 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 MTUS1Q9ULD2 1270 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 MYO7AQ13402 2215 aa12.86□□□□□ -0.35
TARDBP-221ENST00000619555 MICAL3Q7RTP6 2002 aa12.85□□□□□ -0.35
TARDBP-221ENST00000619555 CCDC69A6NI79 296 aa12.85□□□□□ -0.35
TARDBP-221ENST00000619555 PIK3CDO00329 1044 aa12.85□□□□□ -0.35
TARDBP-221ENST00000619555 EFCAB14O75071 495 aa12.85□□□□□ -0.35
TARDBP-221ENST00000619555 CTSHP09668 335 aa12.85□□□□□ -0.35
TARDBP-221ENST00000619555 GNAQP50148 359 aa12.85□□□□□ -0.35
TARDBP-221ENST00000619555 PCNX4Q63HM2 1172 aa12.85□□□□□ -0.35
TARDBP-221ENST00000619555 CREB3L3Q68CJ9 461 aa12.85□□□□□ -0.35
TARDBP-221ENST00000619555 TMTC2Q8N394 836 aa12.85□□□□□ -0.35
TARDBP-221ENST00000619555 GDPD5Q8WTR4 605 aa12.85□□□□□ -0.35
TARDBP-221ENST00000619555 TMEM87BQ96K49 555 aa12.85□□□□□ -0.35
TARDBP-221ENST00000619555 MTA3Q9BTC8 594 aa12.85□□□□□ -0.35
TARDBP-221ENST00000619555 USP26Q9BXU7 913 aa12.85□□□□□ -0.35
TARDBP-221ENST00000619555 SEC63Q9UGP8 760 aaKnown RBP12.85□□□□□ -0.35
TARDBP-221ENST00000619555 LINC01553A4QN01 128 aa12.84□□□□□ -0.35
TARDBP-221ENST00000619555 ATP9AO75110 1047 aa12.84□□□□□ -0.35
TARDBP-221ENST00000619555 ERVK-21P61565 698 aa12.84□□□□□ -0.35
TARDBP-221ENST00000619555 MKRN4PQ13434 485 aaPredicted RBP12.84□□□□□ -0.35
TARDBP-221ENST00000619555 NECTIN1Q15223 517 aa12.84□□□□□ -0.35
TARDBP-221ENST00000619555 PLEKHG4Q58EX7 1191 aa12.84□□□□□ -0.35
TARDBP-221ENST00000619555 XRRA1Q6P2D8 792 aa12.84□□□□□ -0.35
TARDBP-221ENST00000619555 NLRX1Q86UT6 975 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms