RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 MAP3K9P80192 1104 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 FKBP3Q00688 224 aaKnown RBP17.45■□□□□ 0.38
NR1H3-235ENST00000616973 RASA3Q14644 834 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 NAA30Q147X3 362 aaPredicted RBP17.45■□□□□ 0.38
NR1H3-235ENST00000616973 LRRC41Q15345 812 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 GLIS3Q8NEA6 775 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 EEF2KMTQ96G04 330 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 CEP63Q96MT8 703 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 TEPSINQ96N21 525 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 NDST4Q9H3R1 872 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.45■□□□□ 0.38
NR1H3-235ENST00000616973 EPN1Q9Y6I3 576 aaPredicted RBP17.45■□□□□ 0.38
NR1H3-235ENST00000616973 DOCK1Q14185 1865 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 NFKBIEO00221 500 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 TRIM21P19474 475 aaKnown RBP17.45■□□□□ 0.38
NR1H3-235ENST00000616973 CDK17Q00537 523 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 WDR59Q6PJI9 974 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 LDHDQ86WU2 507 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 CYP2W1Q8TAV3 490 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 TBC1D5Q92609 795 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 LPAR1Q92633 364 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 SLC5A5Q92911 643 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 WDR18Q9BV38 432 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 GLIS2Q9BZE0 524 aaPredicted RBP17.45■□□□□ 0.38
NR1H3-235ENST00000616973 MTFR1LQ9H019 292 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 RABGAP1Q9Y3P9 1069 aa17.45■□□□□ 0.38
NR1H3-235ENST00000616973 PARP14Q460N5 1801 aa17.44■□□□□ 0.38
NR1H3-235ENST00000616973 LTBP3Q9NS15 1303 aa17.44■□□□□ 0.38
NR1H3-235ENST00000616973 KIF5CO60282 957 aa17.44■□□□□ 0.38
NR1H3-235ENST00000616973 PSMD10O75832 226 aa17.44■□□□□ 0.38
NR1H3-235ENST00000616973 NDUFA10O95299 355 aa17.44■□□□□ 0.38
NR1H3-235ENST00000616973 GNA14O95837 355 aa17.44■□□□□ 0.38
NR1H3-235ENST00000616973 MUTP22033 750 aa17.44■□□□□ 0.38
NR1H3-235ENST00000616973 PPP2R5CQ13362 524 aa17.44■□□□□ 0.38
NR1H3-235ENST00000616973 GIT2Q14161 759 aa17.44■□□□□ 0.38
NR1H3-235ENST00000616973 ZYXQ15942 572 aaKnown RBP17.44■□□□□ 0.38
NR1H3-235ENST00000616973 HERC4Q5GLZ8 1057 aaPredicted RBP17.44■□□□□ 0.38
NR1H3-235ENST00000616973 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
NR1H3-235ENST00000616973 CCDC84Q86UT8 332 aaPredicted RBP17.44■□□□□ 0.38
NR1H3-235ENST00000616973 ZC3H3Q8IXZ2 948 aaKnown RBP17.44■□□□□ 0.38
NR1H3-235ENST00000616973 ACRBPQ8NEB7 543 aa17.44■□□□□ 0.38
NR1H3-235ENST00000616973 CHP1Q99653 195 aa17.44■□□□□ 0.38
NR1H3-235ENST00000616973 TUFT1Q9NNX1 390 aa17.44■□□□□ 0.38
NR1H3-235ENST00000616973 LZTFL1Q9NQ48 299 aa17.44■□□□□ 0.38
NR1H3-235ENST00000616973 MYO1AQ9UBC5 1043 aa17.44■□□□□ 0.38
NR1H3-235ENST00000616973 SIK3Q9Y2K2 1263 aa17.44■□□□□ 0.38
NR1H3-235ENST00000616973 SHTN1A0MZ66 631 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 WDR46O15213 610 aaKnown RBP17.43■□□□□ 0.38
NR1H3-235ENST00000616973 ZBTB7AO95365 584 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 EYA4O95677 639 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 ICAM1P05362 532 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 KRT18P05783 430 aaKnown RBP17.43■□□□□ 0.38
NR1H3-235ENST00000616973 MARSP56192 900 aaKnown RBP17.43■□□□□ 0.38
NR1H3-235ENST00000616973 OTOP1Q7RTM1 612 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 ZNF397Q8NF99 534 aaPredicted RBP17.43■□□□□ 0.38
NR1H3-235ENST00000616973 EIF2AK1Q9BQI3 630 aaKnown RBP17.43■□□□□ 0.38
NR1H3-235ENST00000616973 KCTD10Q9H3F6 313 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 EMILIN3Q9NT22 766 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 AGPAT5Q9NUQ2 364 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 COL4A3BPQ9Y5P4 624 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 NPHP3-ACAD11A0A0J9YXS1 232 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 NKRFO15226 690 aaKnown RBP eCLIP17.43■□□□□ 0.38
NR1H3-235ENST00000616973 HNRNPH3P31942 346 aaKnown RBP17.43■□□□□ 0.38
NR1H3-235ENST00000616973 HSD17B4P51659 736 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 PSMC6P62333 389 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 GHRHRQ02643 423 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 EDRF1Q3B7T1 1238 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 ARHGAP29Q52LW3 1261 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 ZNF662Q6ZS27 426 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 CCDC125Q86Z20 511 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 SCFD1Q8WVM8 642 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 ZNF341Q9BYN7 854 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 KIAA1683Q9H0B3 1180 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 FBXO28Q9NVF7 368 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 ZNHIT6Q9NWK9 470 aaKnown RBP17.43■□□□□ 0.38
NR1H3-235ENST00000616973 MRFAP1Q9Y605 127 aa17.43■□□□□ 0.38
NR1H3-235ENST00000616973 EML1O00423 815 aa17.42■□□□□ 0.38
NR1H3-235ENST00000616973 CTNND1O60716 968 aaKnown RBP17.42■□□□□ 0.38
NR1H3-235ENST00000616973 ARHGAP25P42331 645 aa17.42■□□□□ 0.38
NR1H3-235ENST00000616973 KLK7P49862 253 aa17.42■□□□□ 0.38
NR1H3-235ENST00000616973 SETQ01105 290 aaPredicted RBP17.42■□□□□ 0.38
NR1H3-235ENST00000616973 PABPC4Q13310 644 aaKnown RBP eCLIP17.42■□□□□ 0.38
NR1H3-235ENST00000616973 TUBB2AQ13885 445 aa17.42■□□□□ 0.38
NR1H3-235ENST00000616973 CEP55Q53EZ4 464 aa17.42■□□□□ 0.38
NR1H3-235ENST00000616973 ARHGAP27Q6ZUM4 889 aa17.42■□□□□ 0.38
NR1H3-235ENST00000616973 CCDC170Q8IYT3 715 aa17.42■□□□□ 0.38
NR1H3-235ENST00000616973 PRPF38AQ8NAV1 312 aaKnown RBP17.42■□□□□ 0.38
NR1H3-235ENST00000616973 PCMTD1Q96MG8 357 aaPredicted RBP17.42■□□□□ 0.38
NR1H3-235ENST00000616973 FEZ1Q99689 392 aa17.42■□□□□ 0.38
NR1H3-235ENST00000616973 HSD17B14Q9BPX1 270 aa17.42■□□□□ 0.38
NR1H3-235ENST00000616973 SLF1Q9BQI6 1058 aa17.42■□□□□ 0.38
NR1H3-235ENST00000616973 TUBB2BQ9BVA1 445 aa17.42■□□□□ 0.38
NR1H3-235ENST00000616973 FGFBP2Q9BYJ0 223 aa17.42■□□□□ 0.38
NR1H3-235ENST00000616973 EDEM3Q9BZQ6 932 aa17.42■□□□□ 0.38
NR1H3-235ENST00000616973 ZNF536O15090 1300 aa17.42■□□□□ 0.38
NR1H3-235ENST00000616973 A0A0U1RQJ8 604 aa17.41■□□□□ 0.38
NR1H3-235ENST00000616973 TRAF5O00463 557 aa17.41■□□□□ 0.38
NR1H3-235ENST00000616973 MEIS1O00470 390 aa17.41■□□□□ 0.38
NR1H3-235ENST00000616973 INPP5BP32019 993 aa17.41■□□□□ 0.38
NR1H3-235ENST00000616973 LRCH2Q5VUJ6 765 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms