RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 HAS3O00219 553 aa25.33■■□□□ 1.65
CBWD3-212ENST00000616550 JAKMIP3Q5VZ66 844 aa25.33■■□□□ 1.65
CBWD3-212ENST00000616550 MCTP2Q6DN12 878 aa25.33■■□□□ 1.65
CBWD3-212ENST00000616550 CCDC148Q8NFR7 591 aa25.33■■□□□ 1.65
CBWD3-212ENST00000616550 GPR20Q99678 358 aa25.33■■□□□ 1.65
CBWD3-212ENST00000616550 MXRA8Q9BRK3 442 aa25.33■■□□□ 1.65
CBWD3-212ENST00000616550 C16orf70Q9BSU1 422 aa25.33■■□□□ 1.65
CBWD3-212ENST00000616550 HDAC6Q9UBN7 1215 aa25.33■■□□□ 1.65
CBWD3-212ENST00000616550 GTF2IRD1Q9UHL9 959 aa25.33■■□□□ 1.65
CBWD3-212ENST00000616550 ATP9AO75110 1047 aa25.32■■□□□ 1.64
CBWD3-212ENST00000616550 LGALS2P05162 132 aa25.32■■□□□ 1.64
CBWD3-212ENST00000616550 ACRP10323 421 aa25.32■■□□□ 1.64
CBWD3-212ENST00000616550 SREBF1P36956 1147 aa25.32■■□□□ 1.64
CBWD3-212ENST00000616550 SP4Q02446 784 aa25.32■■□□□ 1.64
CBWD3-212ENST00000616550 BFSP2Q13515 415 aa25.32■■□□□ 1.64
CBWD3-212ENST00000616550 ANKRD1Q15327 319 aa25.32■■□□□ 1.64
CBWD3-212ENST00000616550 GDF6Q6KF10 455 aaPredicted RBP25.32■■□□□ 1.64
CBWD3-212ENST00000616550 RETREG2Q8NC44 543 aa25.32■■□□□ 1.64
CBWD3-212ENST00000616550 BICD2Q8TD16 824 aa25.32■■□□□ 1.64
CBWD3-212ENST00000616550 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.32■■□□□ 1.64
CBWD3-212ENST00000616550 IL23AQ9NPF7 189 aa25.32■■□□□ 1.64
CBWD3-212ENST00000616550 H3BRB1 525 aa25.31■■□□□ 1.64
CBWD3-212ENST00000616550 SEC24BO95487 1268 aa25.31■■□□□ 1.64
CBWD3-212ENST00000616550 KCNA2P16389 499 aa25.31■■□□□ 1.64
CBWD3-212ENST00000616550 ZNF76P36508 570 aa25.31■■□□□ 1.64
CBWD3-212ENST00000616550 TMEM240Q5SV17 173 aa25.31■■□□□ 1.64
CBWD3-212ENST00000616550 PSRC1Q6PGN9 363 aaPredicted RBP25.31■■□□□ 1.64
CBWD3-212ENST00000616550 C16orf59Q7L2K0 433 aa25.31■■□□□ 1.64
CBWD3-212ENST00000616550 RPUSD2Q8IZ73 545 aaKnown RBP25.31■■□□□ 1.64
CBWD3-212ENST00000616550 REXO1Q8N1G1 1221 aaKnown RBP25.31■■□□□ 1.64
CBWD3-212ENST00000616550 IL17RAQ96F46 866 aa25.31■■□□□ 1.64
CBWD3-212ENST00000616550 WNT8AQ9H1J5 351 aa25.31■■□□□ 1.64
CBWD3-212ENST00000616550 SLKQ9H2G2 1235 aaPredicted RBP25.31■■□□□ 1.64
CBWD3-212ENST00000616550 TUT1Q9H6E5 874 aaKnown RBP25.31■■□□□ 1.64
CBWD3-212ENST00000616550 SH3GLB2Q9NR46 395 aa25.31■■□□□ 1.64
CBWD3-212ENST00000616550 PKD2L1Q9P0L9 805 aa25.31■■□□□ 1.64
CBWD3-212ENST00000616550 CEP55Q53EZ4 464 aa25.3■■□□□ 1.64
CBWD3-212ENST00000616550 ZNF365Q70YC5 407 aa25.3■■□□□ 1.64
CBWD3-212ENST00000616550 CCDC155Q8N6L0 562 aa25.3■■□□□ 1.64
CBWD3-212ENST00000616550 KCNH7Q9NS40 1196 aa25.3■■□□□ 1.64
CBWD3-212ENST00000616550 VPS54Q9P1Q0 977 aa25.3■■□□□ 1.64
CBWD3-212ENST00000616550 TRIP12Q14669 1992 aaPredicted RBP25.3■■□□□ 1.64
CBWD3-212ENST00000616550 PITPNM1O00562 1244 aa25.29■■□□□ 1.64
CBWD3-212ENST00000616550 DEXIO95424 95 aa25.29■■□□□ 1.64
CBWD3-212ENST00000616550 ARHGAP4P98171 946 aa25.29■■□□□ 1.64
CBWD3-212ENST00000616550 UTP14CQ5TAP6 766 aaKnown RBP25.29■■□□□ 1.64
CBWD3-212ENST00000616550 CYP2W1Q8TAV3 490 aa25.29■■□□□ 1.64
CBWD3-212ENST00000616550 SCLYQ96I15 445 aa25.29■■□□□ 1.64
CBWD3-212ENST00000616550 ZNF215Q9UL58 517 aaPredicted RBP25.29■■□□□ 1.64
CBWD3-212ENST00000616550 TPCN1Q9ULQ1 816 aa25.29■■□□□ 1.64
CBWD3-212ENST00000616550 CDKL5O76039 1030 aa25.28■■□□□ 1.64
CBWD3-212ENST00000616550 FGBP02675 491 aa25.28■■□□□ 1.64
CBWD3-212ENST00000616550 AK2P54819 239 aa25.28■■□□□ 1.64
CBWD3-212ENST00000616550 NLRP5P59047 1200 aa25.28■■□□□ 1.64
CBWD3-212ENST00000616550 CAGE1Q8TC20 777 aa25.28■■□□□ 1.64
CBWD3-212ENST00000616550 SCRN1Q12765 414 aa25.27■■□□□ 1.64
CBWD3-212ENST00000616550 SEPT1Q8WYJ6 367 aa25.27■■□□□ 1.64
CBWD3-212ENST00000616550 SDF4Q9BRK5 362 aa25.27■■□□□ 1.64
CBWD3-212ENST00000616550 TELO2Q9Y4R8 837 aa25.27■■□□□ 1.64
CBWD3-212ENST00000616550 LAMA3Q16787 3333 aa25.27■■□□□ 1.64
CBWD3-212ENST00000616550 MEIS1O00470 390 aa25.26■■□□□ 1.63
CBWD3-212ENST00000616550 ADAMTS3O15072 1205 aa25.26■■□□□ 1.63
CBWD3-212ENST00000616550 PFKFB2O60825 505 aa25.26■■□□□ 1.63
CBWD3-212ENST00000616550 CYP3A4P08684 503 aa25.26■■□□□ 1.63
CBWD3-212ENST00000616550 IQCF3P0C7M6 154 aa25.26■■□□□ 1.63
CBWD3-212ENST00000616550 TCF7P36402 384 aaPredicted RBP25.26■■□□□ 1.63
CBWD3-212ENST00000616550 NEK4P51957 841 aa25.26■■□□□ 1.63
CBWD3-212ENST00000616550 SMAD3P84022 425 aaKnown RBP25.26■■□□□ 1.63
CBWD3-212ENST00000616550 NIPA1Q7RTP0 329 aa25.26■■□□□ 1.63
CBWD3-212ENST00000616550 CTAGE1Q96RT6 745 aa25.26■■□□□ 1.63
CBWD3-212ENST00000616550 MTIF3Q9H2K0 278 aaKnown RBP25.26■■□□□ 1.63
CBWD3-212ENST00000616550 JPH1Q9HDC5 661 aaPredicted RBP25.26■■□□□ 1.63
CBWD3-212ENST00000616550 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.25■■□□□ 1.63
CBWD3-212ENST00000616550 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.25■■□□□ 1.63
CBWD3-212ENST00000616550 C17orf102A2RUQ5 167 aa25.25■■□□□ 1.63
CBWD3-212ENST00000616550 PFKMP08237 780 aa25.25■■□□□ 1.63
CBWD3-212ENST00000616550 SMIM10L2AP0DMW4 78 aa25.25■■□□□ 1.63
CBWD3-212ENST00000616550 SMIM10L2BP0DMW5 78 aa25.25■■□□□ 1.63
CBWD3-212ENST00000616550 ARP10275 920 aa25.25■■□□□ 1.63
CBWD3-212ENST00000616550 RFC2P35250 354 aa25.25■■□□□ 1.63
CBWD3-212ENST00000616550 ZNF200P98182 395 aaPredicted RBP25.25■■□□□ 1.63
CBWD3-212ENST00000616550 PTK7Q13308 1070 aa25.25■■□□□ 1.63
CBWD3-212ENST00000616550 PLA2G4DQ86XP0 818 aa25.25■■□□□ 1.63
CBWD3-212ENST00000616550 DEFB123Q8N688 67 aa25.25■■□□□ 1.63
CBWD3-212ENST00000616550 RASGRP4Q8TDF6 673 aa25.25■■□□□ 1.63
CBWD3-212ENST00000616550 AFAP1L1Q8TED9 768 aa25.25■■□□□ 1.63
CBWD3-212ENST00000616550 HERVK_113Q902F9 699 aa25.25■■□□□ 1.63
CBWD3-212ENST00000616550 AGO4Q9HCK5 861 aaKnown RBP25.25■■□□□ 1.63
CBWD3-212ENST00000616550 SLC9A2Q9UBY0 812 aa25.25■■□□□ 1.63
CBWD3-212ENST00000616550 KAT6AQ92794 2004 aa25.25■■□□□ 1.63
CBWD3-212ENST00000616550 NFASCO94856 1347 aa25.24■■□□□ 1.63
CBWD3-212ENST00000616550 GSTTP1A0A1W2PQM5 241 aa25.24■■□□□ 1.63
CBWD3-212ENST00000616550 OTOP2Q7RTS6 562 aa25.24■■□□□ 1.63
CBWD3-212ENST00000616550 DEFB128Q7Z7B8 93 aa25.24■■□□□ 1.63
CBWD3-212ENST00000616550 TRIM50Q86XT4 487 aa25.24■■□□□ 1.63
CBWD3-212ENST00000616550 SCN5AQ14524 2016 aa25.24■■□□□ 1.63
CBWD3-212ENST00000616550 GNAT1P11488 350 aa25.23■■□□□ 1.63
CBWD3-212ENST00000616550 SELPP16109 830 aa25.23■■□□□ 1.63
CBWD3-212ENST00000616550 FAM177A1Q8N128 213 aaPredicted RBP25.23■■□□□ 1.63
CBWD3-212ENST00000616550 CRYGNQ8WXF5 182 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms