RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 PDZD8Q8NEN9 1154 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 MAGOHBQ96A72 148 aaKnown RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 KANSL2Q9H9L4 492 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 ABCA9Q8IUA7 1624 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 BTBD18B2RXH4 712 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 HEXIM1O94992 359 aaKnown RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 KRT1P04264 644 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 ZBED6P86452 979 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 KAZNQ674X7 775 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 ATG16L1Q676U5 607 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 RDH13Q8NBN7 331 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 ENOX1Q8TC92 643 aaKnown RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 DCAF4Q8WV16 495 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 NRBF2Q96F24 287 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 NHEJ1Q9H9Q4 299 aaPredicted RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 PTPN22Q9Y2R2 807 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 PCDHA13Q9Y5I0 950 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 MAD1L1Q9Y6D9 718 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 PSAPP07602 524 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 CLTAP09496 248 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 GCKP35557 465 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 DNAJC24Q6P3W2 148 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 ZNF449Q6P9G9 518 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 PCGF5Q86SE9 256 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 KCTD6Q8NC69 237 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 IL17REQ8NFR9 667 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 SLC7A3Q8WY07 619 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 PARVGQ9HBI0 331 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 SLC38A10Q9HBR0 1119 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 SLAIN2Q9P270 581 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 MED14O60244 1454 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 PNMA6FA0A0J9YX94 578 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 ADD1P35611 737 aaKnown RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 IFRD2Q12894 506 aaPredicted RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 SYDE2Q5VT97 1194 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 EMBQ6PCB8 327 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 DCPSQ96C86 337 aaKnown RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 TTC25Q96NG3 672 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 SCINQ9Y6U3 715 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 ATP5HO75947 161 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 CRKLP46109 303 aaKnown RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 SESN3P58005 492 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 RAPH1Q70E73 1250 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 MICAL1Q8TDZ2 1067 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 DHX38Q92620 1227 aaKnown RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 GDAP1L1Q96MZ0 367 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 CENPKQ9BS16 269 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 IQANK1A0A1B0GTG1 560 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 MAP3K7O43318 606 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 ACTN1P12814 892 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 LIFRP42702 1097 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 INPP1P49441 399 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 ESRRGP62508 458 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 KIF23Q02241 960 aaPredicted RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 ZNF579Q8NAF0 562 aaKnown RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 ZBTB9Q96C00 473 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 ORAI2Q96SN7 254 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 DONSONQ9NYP3 566 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 JAK3P52333 1124 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 DR1Q01658 176 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 MESDQ14696 234 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 TCP11X2Q5H9J9 407 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 SLFN12LQ6IEE8 588 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 TTLL7Q6ZT98 887 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 GIMAP8Q8ND71 665 aaPredicted RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 ANO3Q9BYT9 981 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 SUDS3Q9H7L9 328 aaPredicted RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 ADORA1P30542 326 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 PDE1BQ01064 536 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 RHOT2Q8IXI1 618 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 CMTR1Q8N1G2 835 aaKnown RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 GJA10Q969M2 543 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 FMO2Q99518 471 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 BEGAINQ9BUH8 593 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 FAM96AQ9H5X1 160 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 RCOR1Q9UKL0 485 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 PACSIN2Q9UNF0 486 aaPredicted RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 ALKQ9UM73 1620 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 PXDNLA1KZ92 1463 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 USP32Q8NFA0 1604 aa4.93□□□□□ -1.62
CHD9-221ENST00000615216 GSTA4O15217 222 aa4.93□□□□□ -1.62
CHD9-221ENST00000615216 DCTN3O75935 186 aa4.93□□□□□ -1.62
CHD9-221ENST00000615216 RFX1P22670 979 aa4.93□□□□□ -1.62
CHD9-221ENST00000615216 NFKBIAP25963 317 aa4.93□□□□□ -1.62
CHD9-221ENST00000615216 PDE1CQ14123 709 aaPredicted RBP4.93□□□□□ -1.62
CHD9-221ENST00000615216 DIXDC1Q155Q3 683 aa4.93□□□□□ -1.62
CHD9-221ENST00000615216 ARL13BQ3SXY8 428 aa4.93□□□□□ -1.62
CHD9-221ENST00000615216 FAM160B2Q86V87 743 aa4.93□□□□□ -1.62
CHD9-221ENST00000615216 PI4K2BQ8TCG2 481 aa4.93□□□□□ -1.62
CHD9-221ENST00000615216 SPDL1Q96EA4 605 aa4.93□□□□□ -1.62
CHD9-221ENST00000615216 RRP15Q9Y3B9 282 aaKnown RBP4.93□□□□□ -1.62
CHD9-221ENST00000615216 ARL4AP40617 200 aa4.93□□□□□ -1.62
CHD9-221ENST00000615216 ARHGEF6Q15052 776 aa4.93□□□□□ -1.62
CHD9-221ENST00000615216 TMED2Q15363 201 aa4.93□□□□□ -1.62
CHD9-221ENST00000615216 ZMYND12Q9H0C1 365 aa4.93□□□□□ -1.62
CHD9-221ENST00000615216 GREM2Q9H772 168 aa4.93□□□□□ -1.62
CHD9-221ENST00000615216 MRPL40Q9NQ50 206 aaKnown RBP4.93□□□□□ -1.62
CHD9-221ENST00000615216 DBNLQ9UJU6 430 aaKnown RBP4.93□□□□□ -1.62
CHD9-221ENST00000615216 FAF1Q9UNN5 650 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms