RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 CD44P16070 742 aaKnown RBP15.93■□□□□ 0.14
VPS36-207ENST00000611132 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
VPS36-207ENST00000611132 PHLDB3Q6NSJ2 640 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 PACSIN2Q9UNF0 486 aaPredicted RBP15.93■□□□□ 0.14
VPS36-207ENST00000611132 SNAP23O00161 211 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 GFPT2O94808 682 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 MYO1EQ12965 1108 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 NUGGCQ68CJ6 796 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 ARHGEF18Q6ZSZ5 1173 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 DGKHQ86XP1 1220 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 ISCA1Q9BUE6 129 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 RBM12Q9NTZ6 932 aaKnown RBP15.93■□□□□ 0.14
VPS36-207ENST00000611132 SALL1Q9NSC2 1324 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 NBPF26B4DH59 902 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 TXNRD1Q16881 649 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 NBPF10Q6P3W6 841 aaKnown RBP15.92■□□□□ 0.14
VPS36-207ENST00000611132 PACS2Q86VP3 889 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 SLFN12Q8IYM2 578 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 NBPF15Q8N660 670 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 SLC24A3Q9HC58 644 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 FBXL5Q9UKA1 691 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 ZBTB21Q9ULJ3 1066 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 SART1O43290 800 aaKnown RBP15.92■□□□□ 0.14
VPS36-207ENST00000611132 ATF2P15336 505 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 SEC24CP53992 1094 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 WDR44Q5JSH3 913 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 PAPD7Q5XG87 772 aaKnown RBP15.92■□□□□ 0.14
VPS36-207ENST00000611132 FOXR1Q6PIV2 292 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 TCHHQ07283 1943 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 LRRC8CQ8TDW0 803 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 MS4A14Q96JA4 679 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 SPZ1Q9BXG8 430 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 SUFUQ9UMX1 484 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 USTQ9Y2C2 406 aa15.92■□□□□ 0.14
VPS36-207ENST00000611132 CEP170BQ9Y4F5 1589 aaPredicted RBP15.92■□□□□ 0.14
VPS36-207ENST00000611132 PRR16Q569H4 304 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 CDKAL1Q5VV42 579 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 PDXDC1Q6P996 788 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 PHLDB2Q86SQ0 1253 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 SYNE4Q8N205 404 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 GUF1Q8N442 669 aaKnown RBP15.91■□□□□ 0.14
VPS36-207ENST00000611132 SREK1Q8WXA9 508 aaKnown RBP15.91■□□□□ 0.14
VPS36-207ENST00000611132 TXLNGQ9NUQ3 528 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 BTG4Q9NY30 223 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 SMARCAL1Q9NZC9 954 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 CARSP49589 748 aaKnown RBP15.91■□□□□ 0.14
VPS36-207ENST00000611132 TPH2Q8IWU9 490 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 FBXL16Q8N461 479 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 GCNT4Q9P109 453 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 KIDINS220Q9ULH0 1771 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 FAM107AO95990 144 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 MAEAQ7L5Y9 396 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 STAG2Q8N3U4 1231 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 SNX24Q9Y343 169 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 PLEKHG2Q9H7P9 1386 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 EVI5O60447 810 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 RHOBTB3O94955 611 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 FCER1AP12319 257 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 IL6STP40189 918 aaPredicted RBP15.91■□□□□ 0.14
VPS36-207ENST00000611132 ANKRD35Q8N283 1001 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.91■□□□□ 0.144e-7■□□□□ 9
VPS36-207ENST00000611132 CCSER1Q9C0I3 900 aa15.91■□□□□ 0.14
VPS36-207ENST00000611132 PDS5AQ29RF7 1337 aaKnown RBP15.91■□□□□ 0.14
VPS36-207ENST00000611132 PABPC4Q13310 644 aaKnown RBP eCLIP15.9■□□□□ 0.14
VPS36-207ENST00000611132 BBOF1Q8ND07 529 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 SAAL1Q96ER3 474 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 RNPC3Q96LT9 517 aaKnown RBP15.9■□□□□ 0.14
VPS36-207ENST00000611132 PIGSQ96S52 555 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 LRRC47Q8N1G4 583 aaKnown RBP15.9■□□□□ 0.14
VPS36-207ENST00000611132 TRIM9Q9C026 710 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 ZC3H12CQ9C0D7 883 aaKnown RBP15.9■□□□□ 0.14
VPS36-207ENST00000611132 HAUS2Q9NVX0 235 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 AGTPBP1Q9UPW5 1226 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.9■□□□□ 0.14
VPS36-207ENST00000611132 SSU72P8A0A1W2PR75 194 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 UFL1O94874 794 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 ECEL1O95672 775 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 GCFC2P16383 781 aaKnown RBP15.9■□□□□ 0.14
VPS36-207ENST00000611132 TOB1P50616 345 aaPredicted RBP15.9■□□□□ 0.14
VPS36-207ENST00000611132 PTGISQ16647 500 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 PPP4R3CPQ6ZMV5 832 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 FAM178BQ8IXR5 827 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 MROH1Q8NDA8 1641 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 CFAP73A6NFT4 308 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 TULP2O00295 520 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 ADCY1Q08828 1119 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 FAM186BQ8IYM0 893 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 SLITRK6Q9H5Y7 841 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 PNPLA7Q6ZV29 1317 aa15.9■□□□□ 0.14
VPS36-207ENST00000611132 LRIG3Q6UXM1 1119 aa15.89■□□□□ 0.13
VPS36-207ENST00000611132 FNBP1Q96RU3 617 aa15.89■□□□□ 0.13
VPS36-207ENST00000611132 DNAJC7Q99615 494 aa15.89■□□□□ 0.13
VPS36-207ENST00000611132 UBE2Q2LH0YL09 131 aa15.89■□□□□ 0.13
VPS36-207ENST00000611132 USP17L8P0C7I0 530 aa15.89■□□□□ 0.13
VPS36-207ENST00000611132 SMTNP53814 917 aa15.89■□□□□ 0.13
VPS36-207ENST00000611132 COL9A3Q14050 684 aaPredicted RBP15.89■□□□□ 0.13
VPS36-207ENST00000611132 MEX3CQ5U5Q3 659 aaKnown RBP15.89■□□□□ 0.13
VPS36-207ENST00000611132 PPP1R21Q6ZMI0 780 aa15.89■□□□□ 0.13
VPS36-207ENST00000611132 TRIM4Q9C037 500 aa15.89■□□□□ 0.13
VPS36-207ENST00000611132 PKD2L1Q9P0L9 805 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms