RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 HNRNPCL2B2RXH8 293 aa14.13□□□□□ -0.15
USP6NL-205ENST00000609104 HNRNPCL1O60812 293 aaKnown RBP14.13□□□□□ -0.15
USP6NL-205ENST00000609104 NR1D1P20393 614 aa14.13□□□□□ -0.15
USP6NL-205ENST00000609104 HABP4Q5JVS0 413 aaKnown RBP14.13□□□□□ -0.15
USP6NL-205ENST00000609104 TYW5A2RUC4 315 aaKnown RBP14.12□□□□□ -0.15
USP6NL-205ENST00000609104 TMEM232C9JQI7 657 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 HSPH1Q92598 858 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 SYF2O95926 243 aaKnown RBP14.12□□□□□ -0.15
USP6NL-205ENST00000609104 ICA1Q05084 483 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 SPOPLQ6IQ16 392 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 PTPRKQ15262 1439 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 COL17A1Q9UMD9 1497 aaPredicted RBP14.12□□□□□ -0.15
USP6NL-205ENST00000609104 KIF1BO60333 1816 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 LAD1O00515 517 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 GRAMD1BQ3KR37 738 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 GSDMAQ96QA5 445 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 STK17AQ9UEE5 414 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 CAPN11Q9UMQ6 739 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 SLC4A7Q9Y6M7 1214 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 FMNL1O95466 1100 aaPredicted RBP14.12□□□□□ -0.15
USP6NL-205ENST00000609104 BIVM-ERCC5R4GMW8 1640 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 ARHGDIAP52565 204 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 ALS2CLQ60I27 953 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 FBXO18Q8NFZ0 1043 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 ZNF496Q96IT1 587 aaPredicted RBP14.12□□□□□ -0.15
USP6NL-205ENST00000609104 ACSL3O95573 720 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 HSPA8P11142 646 aaKnown RBP14.12□□□□□ -0.15
USP6NL-205ENST00000609104 ADORA1P30542 326 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 ADCK5Q3MIX3 580 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 ACCSQ96QU6 501 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 USP44Q9H0E7 712 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 TTI1O43156 1089 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 OCRLQ01968 901 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 HIBCHQ6NVY1 386 aaPredicted RBP14.12□□□□□ -0.15
USP6NL-205ENST00000609104 MRPL47Q9HD33 250 aaKnown RBP14.12□□□□□ -0.15
USP6NL-205ENST00000609104 SAMSN1Q9NSI8 373 aaKnown RBP14.12□□□□□ -0.15
USP6NL-205ENST00000609104 CUEDC2Q9H467 287 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 ABCB5Q2M3G0 1257 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 PYROXD1Q8WU10 500 aa14.12□□□□□ -0.15
USP6NL-205ENST00000609104 NXF1Q9UBU9 619 aaKnown RBP14.12□□□□□ -0.15
USP6NL-205ENST00000609104 A0A087WUV0 522 aaPredicted RBP14.11□□□□□ -0.15
USP6NL-205ENST00000609104 INO80B-WBP1J3KQ70 363 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 ZNF710Q8N1W2 664 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 ALKBH8Q96BT7 664 aaKnown RBP14.11□□□□□ -0.15
USP6NL-205ENST00000609104 INO80BQ9C086 356 aaPredicted RBP14.11□□□□□ -0.15
USP6NL-205ENST00000609104 DNAJC24Q6P3W2 148 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 RETREG2Q8NC44 543 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 SPATA17Q96L03 361 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.11□□□□□ -0.15
USP6NL-205ENST00000609104 SMYD3Q9H7B4 428 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 PACSIN2Q9UNF0 486 aaPredicted RBP14.11□□□□□ -0.15
USP6NL-205ENST00000609104 MRPS25P82663 173 aaKnown RBP14.11□□□□□ -0.15
USP6NL-205ENST00000609104 NUDCD3Q8IVD9 361 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 ACTR5Q9H9F9 607 aaPredicted RBP14.11□□□□□ -0.15
USP6NL-205ENST00000609104 SOX5P35711 763 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 TFAMQ00059 246 aaKnown RBP14.11□□□□□ -0.15
USP6NL-205ENST00000609104 TRIML2Q8N7C3 387 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 AK8Q96MA6 479 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 MED7O43513 233 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 TADA3O75528 432 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 C6orf118Q5T5N4 469 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 ANGPTL8Q6UXH0 198 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 TDRD7Q8NHU6 1098 aaKnown RBP14.11□□□□□ -0.15
USP6NL-205ENST00000609104 SLC12A6Q9UHW9 1150 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 CASP8Q14790 479 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 SLC39A14Q15043 492 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 TRIM67Q6ZTA4 783 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 CRLF3Q8IUI8 442 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 ELAC2Q9BQ52 826 aaKnown RBP14.11□□□□□ -0.15
USP6NL-205ENST00000609104 DR1Q01658 176 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 ZBTB33Q86T24 672 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 ST13P4Q8IZP2 240 aaPredicted RBP14.11□□□□□ -0.15
USP6NL-205ENST00000609104 CCHCR1Q8TD31 782 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 LSG1Q9H089 658 aaKnown RBP14.11□□□□□ -0.15
USP6NL-205ENST00000609104 PLXNC1O60486 1568 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 CLCN6P51797 869 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 NUDCD1Q96RS6 583 aa14.11□□□□□ -0.15
USP6NL-205ENST00000609104 KCNA6P17658 529 aa14.1□□□□□ -0.15
USP6NL-205ENST00000609104 TTLL7Q6ZT98 887 aa14.1□□□□□ -0.15
USP6NL-205ENST00000609104 ZC3H18Q86VM9 953 aaKnown RBP14.1□□□□□ -0.15
USP6NL-205ENST00000609104 ZNF518AQ6AHZ1 1483 aa14.1□□□□□ -0.15
USP6NL-205ENST00000609104 RASGRF2O14827 1237 aa14.1□□□□□ -0.15
USP6NL-205ENST00000609104 METTL23Q86XA0 190 aa14.1□□□□□ -0.15
USP6NL-205ENST00000609104 PMLP29590 882 aa14.1□□□□□ -0.15
USP6NL-205ENST00000609104 EIF4A3P38919 411 aaKnown RBP14.1□□□□□ -0.15
USP6NL-205ENST00000609104 YWHAHQ04917 246 aaPredicted RBP14.1□□□□□ -0.15
USP6NL-205ENST00000609104 Q3C1V9 767 aa14.1□□□□□ -0.15
USP6NL-205ENST00000609104 CDCA7Q9BWT1 371 aaPredicted RBP14.1□□□□□ -0.15
USP6NL-205ENST00000609104 KITP10721 976 aa14.1□□□□□ -0.15
USP6NL-205ENST00000609104 KRT10P13645 584 aa14.1□□□□□ -0.15
USP6NL-205ENST00000609104 EXT2Q93063 718 aa14.1□□□□□ -0.15
USP6NL-205ENST00000609104 ATP2B4P23634 1241 aa14.1□□□□□ -0.15
USP6NL-205ENST00000609104 ARL4AP40617 200 aa14.1□□□□□ -0.15
USP6NL-205ENST00000609104 TFDP1Q14186 410 aa14.1□□□□□ -0.15
USP6NL-205ENST00000609104 GLE1Q53GS7 698 aaKnown RBP14.1□□□□□ -0.15
USP6NL-205ENST00000609104 PER1O15534 1290 aaPredicted RBP14.1□□□□□ -0.15
USP6NL-205ENST00000609104 KCNQ3O43525 872 aa14.1□□□□□ -0.15
USP6NL-205ENST00000609104 GAP43P17677 238 aa14.1□□□□□ -0.15
USP6NL-205ENST00000609104 FKBP3Q00688 224 aaKnown RBP14.1□□□□□ -0.15
USP6NL-205ENST00000609104 PPP4R4Q6NUP7 873 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 440.3 ms