RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 POTEMA6NI47 508 aa20.9■□□□□ 0.94
SSBP4-212ENST00000601919 NR1I2O75469 434 aa20.9■□□□□ 0.94
SSBP4-212ENST00000601919 RGS20O76081 388 aa20.9■□□□□ 0.94
SSBP4-212ENST00000601919 ZNF202O95125 648 aa20.9■□□□□ 0.94
SSBP4-212ENST00000601919 HOXD10P28358 340 aa20.9■□□□□ 0.94
SSBP4-212ENST00000601919 KRT76Q01546 638 aa20.9■□□□□ 0.94
SSBP4-212ENST00000601919 OTOP1Q7RTM1 612 aa20.9■□□□□ 0.94
SSBP4-212ENST00000601919 GJA10Q969M2 543 aa20.9■□□□□ 0.94
SSBP4-212ENST00000601919 CDK5RAP3Q96JB5 506 aa20.9■□□□□ 0.94
SSBP4-212ENST00000601919 TIGD1Q96MW7 591 aa20.9■□□□□ 0.94
SSBP4-212ENST00000601919 TINF2Q9BSI4 451 aa20.9■□□□□ 0.94
SSBP4-212ENST00000601919 GJD2Q9UKL4 321 aa20.9■□□□□ 0.94
SSBP4-212ENST00000601919 GPR25O00155 361 aa20.89■□□□□ 0.93
SSBP4-212ENST00000601919 POLR2DO15514 142 aaKnown RBP20.89■□□□□ 0.93
SSBP4-212ENST00000601919 ECM2O94769 699 aaPredicted RBP20.89■□□□□ 0.93
SSBP4-212ENST00000601919 GNRH1P01148 92 aa20.89■□□□□ 0.93
SSBP4-212ENST00000601919 IRF5Q13568 498 aa20.89■□□□□ 0.93
SSBP4-212ENST00000601919 SNW1Q13573 536 aaKnown RBP20.89■□□□□ 0.93
SSBP4-212ENST00000601919 NEDD9Q14511 834 aa20.89■□□□□ 0.93
SSBP4-212ENST00000601919 CCDC183Q5T5S1 534 aa20.89■□□□□ 0.93
SSBP4-212ENST00000601919 OLFML2BQ68BL8 750 aa20.89■□□□□ 0.93
SSBP4-212ENST00000601919 NCAPH2Q6IBW4 605 aa20.89■□□□□ 0.93
SSBP4-212ENST00000601919 CAVIN1Q6NZI2 390 aaKnown RBP20.89■□□□□ 0.93
SSBP4-212ENST00000601919 IQUBQ8NA54 791 aa20.89■□□□□ 0.93
SSBP4-212ENST00000601919 NPLOC4Q8TAT6 608 aa20.89■□□□□ 0.93
SSBP4-212ENST00000601919 SNX29Q8TEQ0 813 aa20.89■□□□□ 0.93
SSBP4-212ENST00000601919 UIMC1Q96RL1 719 aa20.89■□□□□ 0.93
SSBP4-212ENST00000601919 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.89■□□□□ 0.93
SSBP4-212ENST00000601919 PKD2L1Q9P0L9 805 aa20.89■□□□□ 0.93
SSBP4-212ENST00000601919 HOOK1Q9UJC3 728 aaKnown RBP20.89■□□□□ 0.93
SSBP4-212ENST00000601919 XRCC5P13010 732 aaKnown RBP20.88■□□□□ 0.93
SSBP4-212ENST00000601919 KCNA2P16389 499 aa20.88■□□□□ 0.93
SSBP4-212ENST00000601919 SFNP31947 248 aa20.88■□□□□ 0.93
SSBP4-212ENST00000601919 SPIRE1Q08AE8 756 aa20.88■□□□□ 0.93
SSBP4-212ENST00000601919 SEMA3FQ13275 785 aa20.88■□□□□ 0.93
SSBP4-212ENST00000601919 ITGB3BPQ13352 177 aaPredicted RBP20.88■□□□□ 0.93
SSBP4-212ENST00000601919 TTLL4Q14679 1199 aa20.88■□□□□ 0.93
SSBP4-212ENST00000601919 RRAGBQ5VZM2 374 aa20.88■□□□□ 0.93
SSBP4-212ENST00000601919 KANK3Q6NY19 840 aa20.88■□□□□ 0.93
SSBP4-212ENST00000601919 USP49Q70CQ1 688 aa20.88■□□□□ 0.93
SSBP4-212ENST00000601919 RDM1Q8NG50 284 aa20.88■□□□□ 0.93
SSBP4-212ENST00000601919 SCFD2Q8WU76 684 aa20.88■□□□□ 0.93
SSBP4-212ENST00000601919 ERO1AQ96HE7 468 aa20.88■□□□□ 0.93
SSBP4-212ENST00000601919 TRIM47Q96LD4 638 aa20.88■□□□□ 0.93
SSBP4-212ENST00000601919 NT5C3AQ9H0P0 336 aa20.88■□□□□ 0.93
SSBP4-212ENST00000601919 NUP62CLQ9H1M0 184 aa20.88■□□□□ 0.93
SSBP4-212ENST00000601919 ABHD16BQ9H3Z7 469 aa20.88■□□□□ 0.93
SSBP4-212ENST00000601919 CASP8AP2Q9UKL3 1982 aa20.88■□□□□ 0.93
SSBP4-212ENST00000601919 PP2D1A8MPX8 630 aa20.87■□□□□ 0.93
SSBP4-212ENST00000601919 CTAGE5O15320 804 aa20.87■□□□□ 0.93
SSBP4-212ENST00000601919 DHX15O43143 795 aaKnown RBP20.87■□□□□ 0.93
SSBP4-212ENST00000601919 CYP2B6P20813 491 aa20.87■□□□□ 0.93
SSBP4-212ENST00000601919 CCT6AP40227 531 aaKnown RBP20.87■□□□□ 0.93
SSBP4-212ENST00000601919 JAK3P52333 1124 aa20.87■□□□□ 0.93
SSBP4-212ENST00000601919 ZNF746Q6NUN9 644 aaPredicted RBP20.87■□□□□ 0.93
SSBP4-212ENST00000601919 EEPD1Q7L9B9 569 aa20.87■□□□□ 0.93
SSBP4-212ENST00000601919 FBXO16Q8IX29 292 aaPredicted RBP20.87■□□□□ 0.93
SSBP4-212ENST00000601919 TRMT44Q8IYL2 757 aaKnown RBP20.87■□□□□ 0.93
SSBP4-212ENST00000601919 CEP57L1Q8IYX8 460 aa20.87■□□□□ 0.93
SSBP4-212ENST00000601919 KCTD17Q8N5Z5 321 aa20.87■□□□□ 0.93
SSBP4-212ENST00000601919 PDILTQ8N807 584 aa20.87■□□□□ 0.93
SSBP4-212ENST00000601919 NEK9Q8TD19 979 aa20.87■□□□□ 0.93
SSBP4-212ENST00000601919 CUEDC2Q9H467 287 aa20.87■□□□□ 0.93
SSBP4-212ENST00000601919 JPH1Q9HDC5 661 aaPredicted RBP20.87■□□□□ 0.93
SSBP4-212ENST00000601919 DISC1Q9NRI5 854 aa20.87■□□□□ 0.93
SSBP4-212ENST00000601919 DDX39AO00148 427 aaKnown RBP20.86■□□□□ 0.93
SSBP4-212ENST00000601919 CHMP2AO43633 222 aa20.86■□□□□ 0.93
SSBP4-212ENST00000601919 FKTNO75072 461 aa20.86■□□□□ 0.93
SSBP4-212ENST00000601919 ATP9AO75110 1047 aa20.86■□□□□ 0.93
SSBP4-212ENST00000601919 LETM1O95202 739 aaPredicted RBP20.86■□□□□ 0.93
SSBP4-212ENST00000601919 CTGFP29279 349 aa20.86■□□□□ 0.93
SSBP4-212ENST00000601919 CDC25AP30304 524 aa20.86■□□□□ 0.93
SSBP4-212ENST00000601919 STAT6P42226 847 aa20.86■□□□□ 0.93
SSBP4-212ENST00000601919 EPHA7Q15375 998 aa20.86■□□□□ 0.93
SSBP4-212ENST00000601919 ZRSR1Q15695 479 aaKnown RBP20.86■□□□□ 0.93
SSBP4-212ENST00000601919 B3GNT9Q6UX72 402 aa20.86■□□□□ 0.93
SSBP4-212ENST00000601919 MIER3Q7Z3K6 550 aa20.86■□□□□ 0.93
SSBP4-212ENST00000601919 SMAP1Q8IYB5 467 aaPredicted RBP20.86■□□□□ 0.93
SSBP4-212ENST00000601919 CNNM3Q8NE01 707 aa20.86■□□□□ 0.93
SSBP4-212ENST00000601919 POLR3CQ9BUI4 534 aaPredicted RBP20.86■□□□□ 0.93
SSBP4-212ENST00000601919 PANK2Q9BZ23 570 aa20.86■□□□□ 0.93
SSBP4-212ENST00000601919 ARHGAP39Q9C0H5 1083 aa20.86■□□□□ 0.93
SSBP4-212ENST00000601919 UNC45AQ9H3U1 944 aa20.86■□□□□ 0.93
SSBP4-212ENST00000601919 CLSTN2Q9H4D0 955 aa20.86■□□□□ 0.93
SSBP4-212ENST00000601919 SLC9A2Q9UBY0 812 aa20.86■□□□□ 0.93
SSBP4-212ENST00000601919 WDR64B1ANS9 1081 aa20.85■□□□□ 0.93
SSBP4-212ENST00000601919 SLFN14P0C7P3 912 aa20.85■□□□□ 0.93
SSBP4-212ENST00000601919 MUTP22033 750 aa20.85■□□□□ 0.93
SSBP4-212ENST00000601919 RPA1P27694 616 aa20.85■□□□□ 0.93
SSBP4-212ENST00000601919 KARSQ15046 597 aaKnown RBP20.85■□□□□ 0.93
SSBP4-212ENST00000601919 ELOA2Q8IYF1 753 aaPredicted RBP20.85■□□□□ 0.93
SSBP4-212ENST00000601919 DHX58Q96C10 678 aa20.85■□□□□ 0.93
SSBP4-212ENST00000601919 MMTAG2Q9BU76 263 aaKnown RBP20.85■□□□□ 0.93
SSBP4-212ENST00000601919 TNMDQ9H2S6 317 aa20.85■□□□□ 0.93
SSBP4-212ENST00000601919 MAGEF1Q9HAY2 307 aa20.85■□□□□ 0.93
SSBP4-212ENST00000601919 TUFT1Q9NNX1 390 aa20.85■□□□□ 0.93
SSBP4-212ENST00000601919 STK17AQ9UEE5 414 aa20.85■□□□□ 0.93
SSBP4-212ENST00000601919 DDX41Q9UJV9 622 aaKnown RBP20.85■□□□□ 0.93
SSBP4-212ENST00000601919 SAMM50Q9Y512 469 aa20.85■□□□□ 0.93
SSBP4-212ENST00000601919 ZSWIM8A7E2V4 1837 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms