RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 SMC3Q9UQE7 1217 aa15.7■□□□□ 0.1
SNRPA-208ENST00000600456 NR2E3Q9Y5X4 410 aa15.7■□□□□ 0.1
SNRPA-208ENST00000600456 CYP3A7-CYP3A51PA0A087WV96 503 aa15.69■□□□□ 0.1
SNRPA-208ENST00000600456 K7ELQ4 463 aaPredicted RBP15.69■□□□□ 0.1
SNRPA-208ENST00000600456 ARP10275 920 aa15.69■□□□□ 0.1
SNRPA-208ENST00000600456 GCFC2P16383 781 aaKnown RBP15.69■□□□□ 0.1
SNRPA-208ENST00000600456 CYP3A7P24462 503 aa15.69■□□□□ 0.1
SNRPA-208ENST00000600456 RTP1P59025 263 aa15.69■□□□□ 0.1
SNRPA-208ENST00000600456 NR5A1Q13285 461 aa15.69■□□□□ 0.1
SNRPA-208ENST00000600456 PRR16Q569H4 304 aa15.69■□□□□ 0.1
SNRPA-208ENST00000600456 NEK8Q86SG6 692 aa15.69■□□□□ 0.1
SNRPA-208ENST00000600456 VTI1AQ96AJ9 217 aa15.69■□□□□ 0.1
SNRPA-208ENST00000600456 SDF4Q9BRK5 362 aa15.69■□□□□ 0.1
SNRPA-208ENST00000600456 JPH1Q9HDC5 661 aaPredicted RBP15.69■□□□□ 0.1
SNRPA-208ENST00000600456 MROH7Q68CQ1 1323 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 BTBD18B2RXH4 712 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 ARVCFO00192 962 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 EDIL3O43854 480 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 GJB2P29033 226 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 FOSBP53539 338 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 ITGA7Q13683 1181 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 INF2Q27J81 1249 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 Q4G0T1 1027 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 PPP4R3AQ6IN85 833 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 PIK3AP1Q6ZUJ8 805 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 ANKRD33Q7Z3H0 272 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 SLC43A3Q8NBI5 491 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 LENG9Q96B70 501 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 INTS4Q96HW7 963 aaKnown RBP15.68■□□□□ 0.1
SNRPA-208ENST00000600456 MBOAT7Q96N66 472 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 TOX2Q96NM4 488 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 GPR20Q99678 358 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 ZNF577Q9BSK1 485 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 KATNAL1Q9BW62 490 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 FOXP1Q9H334 677 aaPredicted RBP15.68■□□□□ 0.1
SNRPA-208ENST00000600456 TBC1D22BQ9NU19 505 aa15.68■□□□□ 0.1
SNRPA-208ENST00000600456 IPO5O00410 1097 aaKnown RBP15.67■□□□□ 0.1
SNRPA-208ENST00000600456 SORBS3O60504 671 aa15.67■□□□□ 0.1
SNRPA-208ENST00000600456 F2P00734 622 aa15.67■□□□□ 0.1
SNRPA-208ENST00000600456 CDK7P50613 346 aa15.67■□□□□ 0.1
SNRPA-208ENST00000600456 GUCY1B3Q02153 619 aa15.67■□□□□ 0.1
SNRPA-208ENST00000600456 ITGB3BPQ13352 177 aaPredicted RBP15.67■□□□□ 0.1
SNRPA-208ENST00000600456 TRIM60Q495X7 471 aa15.67■□□□□ 0.1
SNRPA-208ENST00000600456 SEPT1Q8WYJ6 367 aa15.67■□□□□ 0.1
SNRPA-208ENST00000600456 BCAS3Q9H6U6 928 aa15.67■□□□□ 0.1
SNRPA-208ENST00000600456 PKD2L1Q9P0L9 805 aa15.67■□□□□ 0.1
SNRPA-208ENST00000600456 SLC9A2Q9UBY0 812 aa15.67■□□□□ 0.1
SNRPA-208ENST00000600456 ATP11BQ9Y2G3 1177 aa15.67■□□□□ 0.1
SNRPA-208ENST00000600456 MKI67P46013 3256 aaKnown RBP15.67■□□□□ 0.1
SNRPA-208ENST00000600456 TDP2O95551 362 aa15.66■□□□□ 0.1
SNRPA-208ENST00000600456 TLE2Q04725 743 aa15.66■□□□□ 0.1
SNRPA-208ENST00000600456 PTPN11Q06124 597 aaPredicted RBP15.66■□□□□ 0.1
SNRPA-208ENST00000600456 LETM2Q2VYF4 491 aa15.66■□□□□ 0.1
SNRPA-208ENST00000600456 EARS2Q5JPH6 523 aaKnown RBP15.66■□□□□ 0.1
SNRPA-208ENST00000600456 NFRKBQ6P4R8 1299 aa15.66■□□□□ 0.1
SNRPA-208ENST00000600456 HSCBQ8IWL3 235 aa15.66■□□□□ 0.1
SNRPA-208ENST00000600456 C7orf61Q8IZ16 206 aa15.66■□□□□ 0.1
SNRPA-208ENST00000600456 KAT2BQ92831 832 aa15.66■□□□□ 0.1
SNRPA-208ENST00000600456 RIT2Q99578 217 aa15.66■□□□□ 0.1
SNRPA-208ENST00000600456 DDX25Q9UHL0 483 aaKnown RBP15.66■□□□□ 0.1
SNRPA-208ENST00000600456 TCEAL9Q9UHQ7 104 aa15.66■□□□□ 0.1
SNRPA-208ENST00000600456 GRIN2DO15399 1336 aa15.66■□□□□ 0.1
SNRPA-208ENST00000600456 MYH7BA7E2Y1 1941 aa15.65■□□□□ 0.1
SNRPA-208ENST00000600456 DCDC2CA8MYV0 355 aa15.65■□□□□ 0.1
SNRPA-208ENST00000600456 HAS3O00219 553 aa15.65■□□□□ 0.1
SNRPA-208ENST00000600456 TLR3O15455 904 aaKnown RBP15.65■□□□□ 0.1
SNRPA-208ENST00000600456 MSH4O15457 936 aa15.65■□□□□ 0.1
SNRPA-208ENST00000600456 DHX15O43143 795 aaKnown RBP15.65■□□□□ 0.1
SNRPA-208ENST00000600456 PQBP1O60828 265 aaKnown RBP15.65■□□□□ 0.1
SNRPA-208ENST00000600456 LGALS2P05162 132 aa15.65■□□□□ 0.1
SNRPA-208ENST00000600456 ZNF286BP0CG31 522 aa15.65■□□□□ 0.1
SNRPA-208ENST00000600456 PDCP20941 246 aa15.65■□□□□ 0.1
SNRPA-208ENST00000600456 PSMC6P62333 389 aa15.65■□□□□ 0.1
SNRPA-208ENST00000600456 SP4Q02446 784 aa15.65■□□□□ 0.1
SNRPA-208ENST00000600456 GNL2Q13823 731 aaKnown RBP15.65■□□□□ 0.1
SNRPA-208ENST00000600456 SESTD1Q86VW0 696 aa15.65■□□□□ 0.1
SNRPA-208ENST00000600456 SLC5A5Q92911 643 aa15.65■□□□□ 0.1
SNRPA-208ENST00000600456 C16orf70Q9BSU1 422 aa15.65■□□□□ 0.1
SNRPA-208ENST00000600456 ZNF215Q9UL58 517 aaPredicted RBP15.65■□□□□ 0.1
SNRPA-208ENST00000600456 TNRC18O15417 2968 aaPredicted RBP15.65■□□□□ 0.1
SNRPA-208ENST00000600456 GSTTP1A0A1W2PQM5 241 aa15.64■□□□□ 0.09
SNRPA-208ENST00000600456 FAM205CA6NFA0 338 aa15.64■□□□□ 0.09
SNRPA-208ENST00000600456 H3BRB1 525 aa15.64■□□□□ 0.09
SNRPA-208ENST00000600456 TBX3O15119 743 aa15.64■□□□□ 0.09
SNRPA-208ENST00000600456 CCNT1O60563 726 aaKnown RBP15.64■□□□□ 0.09
SNRPA-208ENST00000600456 U2AF2P26368 475 aaKnown RBP eCLIP15.64■□□□□ 0.09
SNRPA-208ENST00000600456 TCF7P36402 384 aaPredicted RBP15.64■□□□□ 0.09
SNRPA-208ENST00000600456 PSEN2P49810 448 aa15.64■□□□□ 0.09
SNRPA-208ENST00000600456 ACTR2P61160 394 aa15.64■□□□□ 0.09
SNRPA-208ENST00000600456 KRT76Q01546 638 aa15.64■□□□□ 0.09
SNRPA-208ENST00000600456 MFSD10Q14728 455 aa15.64■□□□□ 0.09
SNRPA-208ENST00000600456 NBPF20Q3BBV1 942 aa15.64■□□□□ 0.09
SNRPA-208ENST00000600456 ZNF746Q6NUN9 644 aaPredicted RBP15.64■□□□□ 0.09
SNRPA-208ENST00000600456 NOSTRINQ8IVI9 506 aa15.64■□□□□ 0.09
SNRPA-208ENST00000600456 FAM126BQ8IXS8 530 aa15.64■□□□□ 0.09
SNRPA-208ENST00000600456 TUT1Q9H6E5 874 aaKnown RBP15.64■□□□□ 0.09
SNRPA-208ENST00000600456 EMSYQ7Z589 1322 aa15.64■□□□□ 0.09
SNRPA-208ENST00000600456 H3BQV1 296 aa15.63■□□□□ 0.09
SNRPA-208ENST00000600456 GAS7O60861 476 aa15.63■□□□□ 0.09
SNRPA-208ENST00000600456 CLTBP09497 229 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms