RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 RNPEPQ9H4A4 650 aa17.18■□□□□ 0.34
XRCC1-205ENST00000595789 SUGCTQ9HAC7 445 aa17.18■□□□□ 0.34
XRCC1-205ENST00000595789 LMCD1Q9NZU5 365 aa17.18■□□□□ 0.34
XRCC1-205ENST00000595789 TELO2Q9Y4R8 837 aa17.18■□□□□ 0.34
XRCC1-205ENST00000595789 TCF20Q9UGU0 1960 aaKnown RBP17.18■□□□□ 0.34
XRCC1-205ENST00000595789 C17orf102A2RUQ5 167 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 LINC01553A4QN01 128 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 RSPH10B2B2RC85 870 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 TREHO43280 583 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 STAM2O75886 525 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 RSPH10BP0C881 870 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 SMIM10L2AP0DMW4 78 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 SMIM10L2BP0DMW5 78 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 THPOP40225 353 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 SART3Q15020 963 aaKnown RBP17.17■□□□□ 0.34
XRCC1-205ENST00000595789 PLEKHG4Q58EX7 1191 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 METTL7BQ6UX53 244 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 CATIPQ7Z7H3 387 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 IL27Q8NEV9 243 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 ATP6V0A1Q93050 837 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 GPR20Q99678 358 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 SPZ1Q9BXG8 430 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 LY9Q9HBG7 655 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 RTEL1Q9NZ71 1219 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 EMSYQ7Z589 1322 aa17.17■□□□□ 0.34
XRCC1-205ENST00000595789 MEIS2O14770 477 aa17.16■□□□□ 0.34
XRCC1-205ENST00000595789 COL9A1P20849 921 aa17.16■□□□□ 0.34
XRCC1-205ENST00000595789 SMARCA1P28370 1054 aa17.16■□□□□ 0.34
XRCC1-205ENST00000595789 COL9A3Q14050 684 aaPredicted RBP17.16■□□□□ 0.34
XRCC1-205ENST00000595789 NEDD9Q14511 834 aa17.16■□□□□ 0.34
XRCC1-205ENST00000595789 GNPTABQ3T906 1256 aa17.16■□□□□ 0.34
XRCC1-205ENST00000595789 USP17L6PQ6QN14 398 aa17.16■□□□□ 0.34
XRCC1-205ENST00000595789 CYFIP1Q7L576 1253 aa17.16■□□□□ 0.34
XRCC1-205ENST00000595789 GDPD5Q8WTR4 605 aa17.16■□□□□ 0.34
XRCC1-205ENST00000595789 PIBF1Q8WXW3 757 aa17.16■□□□□ 0.34
XRCC1-205ENST00000595789 HLA-CQ95604 372 aa17.16■□□□□ 0.34
XRCC1-205ENST00000595789 TGS1Q96RS0 853 aaKnown RBP17.16■□□□□ 0.34
XRCC1-205ENST00000595789 USP26Q9BXU7 913 aa17.16■□□□□ 0.34
XRCC1-205ENST00000595789 RBM8AQ9Y5S9 174 aaKnown RBP17.16■□□□□ 0.34
XRCC1-205ENST00000595789 PIK3CDO00329 1044 aa17.15■□□□□ 0.34
XRCC1-205ENST00000595789 FIBPO43427 364 aa17.15■□□□□ 0.34
XRCC1-205ENST00000595789 ADAM17P78536 824 aa17.15■□□□□ 0.34
XRCC1-205ENST00000595789 HTRA4P83105 476 aaPredicted RBP17.15■□□□□ 0.34
XRCC1-205ENST00000595789 FAM117BQ6P1L5 589 aa17.15■□□□□ 0.34
XRCC1-205ENST00000595789 ZNF654Q8IZM8 581 aa17.15■□□□□ 0.34
XRCC1-205ENST00000595789 SENP7Q9BQF6 1050 aa17.15■□□□□ 0.34
XRCC1-205ENST00000595789 MTA3Q9BTC8 594 aa17.15■□□□□ 0.34
XRCC1-205ENST00000595789 MYL10Q9BUA6 226 aa17.15■□□□□ 0.34
XRCC1-205ENST00000595789 SETD4Q9NVD3 440 aa17.15■□□□□ 0.34
XRCC1-205ENST00000595789 MTUS1Q9ULD2 1270 aa17.15■□□□□ 0.34
XRCC1-205ENST00000595789 NOP56O00567 594 aaKnown RBP17.14■□□□□ 0.33
XRCC1-205ENST00000595789 DDAH1O94760 285 aa17.14■□□□□ 0.33
XRCC1-205ENST00000595789 PCNX4Q63HM2 1172 aa17.14■□□□□ 0.33
XRCC1-205ENST00000595789 SP7Q8TDD2 431 aaPredicted RBP17.14■□□□□ 0.33
XRCC1-205ENST00000595789 INSL6Q9Y581 213 aa17.14■□□□□ 0.33
XRCC1-205ENST00000595789 CAND2O75155 1236 aa17.13■□□□□ 0.33
XRCC1-205ENST00000595789 PLEKHA8P1O95397 391 aa17.13■□□□□ 0.33
XRCC1-205ENST00000595789 XRRA1Q6P2D8 792 aa17.13■□□□□ 0.33
XRCC1-205ENST00000595789 TRIM50Q86XT4 487 aa17.13■□□□□ 0.33
XRCC1-205ENST00000595789 SRBD1Q8N5C6 995 aaKnown RBP17.13■□□□□ 0.33
XRCC1-205ENST00000595789 RRP36Q96EU6 259 aaKnown RBP17.13■□□□□ 0.33
XRCC1-205ENST00000595789 C17orf80Q9BSJ5 609 aa17.13■□□□□ 0.33
XRCC1-205ENST00000595789 RAPGEFL1Q9UHV5 662 aa17.13■□□□□ 0.33
XRCC1-205ENST00000595789 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.12■□□□□ 0.33
XRCC1-205ENST00000595789 PRC1O43663 620 aa17.12■□□□□ 0.33
XRCC1-205ENST00000595789 ATP9AO75110 1047 aa17.12■□□□□ 0.33
XRCC1-205ENST00000595789 AMHP03971 560 aa17.12■□□□□ 0.33
XRCC1-205ENST00000595789 KIF5BP33176 963 aa17.12■□□□□ 0.33
XRCC1-205ENST00000595789 FAM26DQ5JW98 314 aa17.12■□□□□ 0.33
XRCC1-205ENST00000595789 MYOCDQ8IZQ8 938 aa17.12■□□□□ 0.33
XRCC1-205ENST00000595789 CTCFLQ8NI51 663 aaPredicted RBP17.12■□□□□ 0.33
XRCC1-205ENST00000595789 SMARCC2Q8TAQ2 1214 aa17.12■□□□□ 0.33
XRCC1-205ENST00000595789 TOP1MTQ969P6 601 aa17.12■□□□□ 0.33
XRCC1-205ENST00000595789 LZTS2Q9BRK4 669 aa17.12■□□□□ 0.33
XRCC1-205ENST00000595789 LSG1Q9H089 658 aaKnown RBP17.12■□□□□ 0.33
XRCC1-205ENST00000595789 COL4A4P53420 1690 aaPredicted RBP17.11■□□□□ 0.33
XRCC1-205ENST00000595789 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.11■□□□□ 0.33
XRCC1-205ENST00000595789 SH2B2O14492 632 aaPredicted RBP17.11■□□□□ 0.33
XRCC1-205ENST00000595789 CTSHP09668 335 aa17.11■□□□□ 0.33
XRCC1-205ENST00000595789 UTP14CQ5TAP6 766 aaKnown RBP17.11■□□□□ 0.33
XRCC1-205ENST00000595789 CMTR1Q8N1G2 835 aaKnown RBP17.11■□□□□ 0.33
XRCC1-205ENST00000595789 LMBR1Q8WVP7 490 aa17.11■□□□□ 0.33
XRCC1-205ENST00000595789 SEPT8Q92599 483 aa17.11■□□□□ 0.33
XRCC1-205ENST00000595789 CUL5Q93034 780 aa17.11■□□□□ 0.33
XRCC1-205ENST00000595789 MICAL3Q7RTP6 2002 aa17.1■□□□□ 0.33
XRCC1-205ENST00000595789 GNAT1P11488 350 aa17.1■□□□□ 0.33
XRCC1-205ENST00000595789 KCNA2P16389 499 aa17.1■□□□□ 0.33
XRCC1-205ENST00000595789 MCM5P33992 734 aa17.1■□□□□ 0.33
XRCC1-205ENST00000595789 LIFRP42702 1097 aa17.1■□□□□ 0.33
XRCC1-205ENST00000595789 GNAQP50148 359 aa17.1■□□□□ 0.33
XRCC1-205ENST00000595789 IRX6P78412 446 aaPredicted RBP17.1■□□□□ 0.33
XRCC1-205ENST00000595789 CASC1Q6TDU7 716 aa17.1■□□□□ 0.33
XRCC1-205ENST00000595789 RPAINQ86UA6 219 aa17.1■□□□□ 0.33
XRCC1-205ENST00000595789 NLRX1Q86UT6 975 aa17.1■□□□□ 0.33
XRCC1-205ENST00000595789 TMTC2Q8N394 836 aa17.1■□□□□ 0.33
XRCC1-205ENST00000595789 GPRASP2Q96D09 838 aa17.1■□□□□ 0.33
XRCC1-205ENST00000595789 TMEM87BQ96K49 555 aa17.1■□□□□ 0.33
XRCC1-205ENST00000595789 PSTPIP2Q9H939 334 aa17.1■□□□□ 0.33
XRCC1-205ENST00000595789 MYO7AQ13402 2215 aa17.09■□□□□ 0.33
XRCC1-205ENST00000595789 GSTTP1A0A1W2PQM5 241 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms