RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 PRAMEF19Q5SWL8 479 aa12.05□□□□□ -0.48
SMAD4-214ENST00000592186 LRCH2Q5VUJ6 765 aa12.05□□□□□ -0.48
SMAD4-214ENST00000592186 DHX37Q8IY37 1157 aaKnown RBP12.05□□□□□ -0.48
SMAD4-214ENST00000592186 HAS1Q92839 578 aa12.05□□□□□ -0.48
SMAD4-214ENST00000592186 ZFP91Q96JP5 570 aaPredicted RBP12.05□□□□□ -0.48
SMAD4-214ENST00000592186 SPATA32Q96LK8 384 aa12.05□□□□□ -0.48
SMAD4-214ENST00000592186 TTC12Q9H892 705 aaPredicted RBP12.05□□□□□ -0.48
SMAD4-214ENST00000592186 MLXIPQ9HAP2 919 aa12.05□□□□□ -0.48
SMAD4-214ENST00000592186 HMX1Q9NP08 348 aaPredicted RBP12.05□□□□□ -0.48
SMAD4-214ENST00000592186 PDGFCQ9NRA1 345 aa12.05□□□□□ -0.48
SMAD4-214ENST00000592186 DDX49Q9Y6V7 483 aaKnown RBP12.05□□□□□ -0.48
SMAD4-214ENST00000592186 WNT7AO00755 349 aa12.04□□□□□ -0.48
SMAD4-214ENST00000592186 ATP9AO75110 1047 aa12.04□□□□□ -0.48
SMAD4-214ENST00000592186 DUSP11O75319 330 aaKnown RBP12.04□□□□□ -0.48
SMAD4-214ENST00000592186 PSMD10O75832 226 aa12.04□□□□□ -0.48
SMAD4-214ENST00000592186 GH1P01241 217 aa12.04□□□□□ -0.48
SMAD4-214ENST00000592186 INHAP05111 366 aa12.04□□□□□ -0.48
SMAD4-214ENST00000592186 KCNA2P16389 499 aa12.04□□□□□ -0.48
SMAD4-214ENST00000592186 CNGA1P29973 690 aa12.04□□□□□ -0.48
SMAD4-214ENST00000592186 SFNP31947 248 aa12.04□□□□□ -0.48
SMAD4-214ENST00000592186 ADCYAP1R1P41586 468 aa12.04□□□□□ -0.48
SMAD4-214ENST00000592186 FXR2P51116 673 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMAD4-214ENST00000592186 KRT76Q01546 638 aa12.04□□□□□ -0.48
SMAD4-214ENST00000592186 BRDTQ58F21 947 aaPredicted RBP12.04□□□□□ -0.48
SMAD4-214ENST00000592186 CELF3Q5SZQ8 465 aaKnown RBP12.04□□□□□ -0.48
SMAD4-214ENST00000592186 METTL7BQ6UX53 244 aa12.04□□□□□ -0.48
SMAD4-214ENST00000592186 KRI1Q8N9T8 703 aaKnown RBP12.04□□□□□ -0.48
SMAD4-214ENST00000592186 RDM1Q8NG50 284 aa12.04□□□□□ -0.48
SMAD4-214ENST00000592186 EMID1Q96A84 441 aaPredicted RBP12.04□□□□□ -0.48
SMAD4-214ENST00000592186 AK8Q96MA6 479 aa12.04□□□□□ -0.48
SMAD4-214ENST00000592186 TEKT3Q9BXF9 490 aa12.04□□□□□ -0.48
SMAD4-214ENST00000592186 TMEM60Q9H2L4 133 aa12.04□□□□□ -0.48
SMAD4-214ENST00000592186 SRPRBQ9Y5M8 271 aaKnown RBP12.04□□□□□ -0.48
SMAD4-214ENST00000592186 DHX15O43143 795 aaKnown RBP12.03□□□□□ -0.48
SMAD4-214ENST00000592186 CAPN2P17655 700 aa12.03□□□□□ -0.48
SMAD4-214ENST00000592186 UBA1P22314 1058 aaKnown RBP12.03□□□□□ -0.48
SMAD4-214ENST00000592186 LONP1P36776 959 aaKnown RBP12.03□□□□□ -0.48
SMAD4-214ENST00000592186 ME1P48163 572 aa12.03□□□□□ -0.48
SMAD4-214ENST00000592186 SP2Q02086 613 aa12.03□□□□□ -0.48
SMAD4-214ENST00000592186 SEMA3FQ13275 785 aa12.03□□□□□ -0.48
SMAD4-214ENST00000592186 ITGB3BPQ13352 177 aaPredicted RBP12.03□□□□□ -0.48
SMAD4-214ENST00000592186 PPP2R5CQ13362 524 aa12.03□□□□□ -0.48
SMAD4-214ENST00000592186 LY6KQ17RY6 165 aa12.03□□□□□ -0.48
SMAD4-214ENST00000592186 ZNF746Q6NUN9 644 aaPredicted RBP12.03□□□□□ -0.48
SMAD4-214ENST00000592186 SMAP1Q8IYB5 467 aaPredicted RBP12.03□□□□□ -0.48
SMAD4-214ENST00000592186 ZNF579Q8NAF0 562 aaKnown RBP12.03□□□□□ -0.48
SMAD4-214ENST00000592186 LEO1Q8WVC0 666 aaPredicted RBP12.03□□□□□ -0.48
SMAD4-214ENST00000592186 AP5M1Q9H0R1 490 aa12.03□□□□□ -0.48
SMAD4-214ENST00000592186 SPC25Q9HBM1 224 aa12.03□□□□□ -0.48
SMAD4-214ENST00000592186 JPH1Q9HDC5 661 aaPredicted RBP12.03□□□□□ -0.48
SMAD4-214ENST00000592186 SLC9A2Q9UBY0 812 aa12.03□□□□□ -0.48
SMAD4-214ENST00000592186 ELP1O95163 1332 aa12.03□□□□□ -0.48
SMAD4-214ENST00000592186 CASP8AP2Q9UKL3 1982 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 GOLGA6L4A6NEF3 574 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 GOLGA6L22H0YM25 854 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 NOP56O00567 594 aaKnown RBP12.02□□□□□ -0.49
SMAD4-214ENST00000592186 SLC26A4O43511 780 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 KPNA6O60684 536 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 CUTAO60888 179 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 PPFIA4O75335 1185 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 GGPS1O95749 300 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 RARBP10826 455 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 SMPD1P17405 629 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 MARCKSP29966 332 aaPredicted RBP12.02□□□□□ -0.49
SMAD4-214ENST00000592186 TECP42680 631 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 JAK3P52333 1124 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 CYFIP1Q7L576 1253 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 TRPV1Q8NER1 839 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 ERMNQ8TAM6 284 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 SEPT1Q8WYJ6 367 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 FTOQ9C0B1 505 aaKnown RBP eCLIP12.02□□□□□ -0.49
SMAD4-214ENST00000592186 LRWD1Q9UFC0 647 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 FBXO2Q9UK22 296 aaPredicted RBP12.02□□□□□ -0.49
SMAD4-214ENST00000592186 GNEQ9Y223 722 aaKnown RBP12.02□□□□□ -0.49
SMAD4-214ENST00000592186 PCDHA10Q9Y5I2 948 aa12.02□□□□□ -0.49
SMAD4-214ENST00000592186 PLXNA1Q9UIW2 1896 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 VWA3AA6NCI4 1184 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 WDR64B1ANS9 1081 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 DYNC1LI2O43237 492 aaPredicted RBP12.01□□□□□ -0.49
SMAD4-214ENST00000592186 DKC1O60832 514 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMAD4-214ENST00000592186 FARP2O94887 1054 aaPredicted RBP12.01□□□□□ -0.49
SMAD4-214ENST00000592186 ARIH2O95376 493 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 PSAPP07602 524 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 CPT1AP50416 773 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 NKX3-2P78367 333 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 ARHGAP1Q07960 439 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 TRIM32Q13049 653 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 ADALQ6DHV7 355 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 B3GNT9Q6UX72 402 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 KCTD17Q8N5Z5 321 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 IGSF22Q8N9C0 903 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 PPTC7Q8NI37 304 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 NEK9Q8TD19 979 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 SH3TC2Q8TF17 1288 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 ARMC5Q96C12 935 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 SPATA33Q96N06 139 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 PKD2L1Q9P0L9 805 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 DDX20Q9UHI6 824 aaKnown RBP12.01□□□□□ -0.49
SMAD4-214ENST00000592186 VAV3Q9UKW4 847 aa12.01□□□□□ -0.49
SMAD4-214ENST00000592186 SAMM50Q9Y512 469 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms