RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 RALGAPA2Q2PPJ7 1873 aa20.18■□□□□ 0.82
RETREG3-210ENST00000590541 MBTPS2O43462 519 aa20.17■□□□□ 0.82
RETREG3-210ENST00000590541 CTSHP09668 335 aa20.17■□□□□ 0.82
RETREG3-210ENST00000590541 MYCLP12524 364 aaPredicted RBP20.17■□□□□ 0.82
RETREG3-210ENST00000590541 UBA1P22314 1058 aaKnown RBP20.17■□□□□ 0.82
RETREG3-210ENST00000590541 HYAL1Q12794 435 aa20.17■□□□□ 0.82
RETREG3-210ENST00000590541 NMIQ13287 307 aaPredicted RBP20.17■□□□□ 0.82
RETREG3-210ENST00000590541 ASPRV1Q53RT3 343 aa20.17■□□□□ 0.82
RETREG3-210ENST00000590541 HERC4Q5GLZ8 1057 aaPredicted RBP20.17■□□□□ 0.82
RETREG3-210ENST00000590541 KCNV1Q6PIU1 500 aa20.17■□□□□ 0.82
RETREG3-210ENST00000590541 CHD1LQ86WJ1 897 aa20.17■□□□□ 0.82
RETREG3-210ENST00000590541 MFSD14AQ96MC6 490 aa20.17■□□□□ 0.82
RETREG3-210ENST00000590541 PHOX2BQ99453 314 aa20.17■□□□□ 0.82
RETREG3-210ENST00000590541 IFIH1Q9BYX4 1025 aaKnown RBP20.17■□□□□ 0.82
RETREG3-210ENST00000590541 LNPKQ9C0E8 428 aa20.17■□□□□ 0.82
RETREG3-210ENST00000590541 RNPEPQ9H4A4 650 aa20.17■□□□□ 0.82
RETREG3-210ENST00000590541 RNF41Q9H4P4 317 aaPredicted RBP20.17■□□□□ 0.82
RETREG3-210ENST00000590541 VAT1LQ9HCJ6 419 aa20.17■□□□□ 0.82
RETREG3-210ENST00000590541 C5orf67F2Z3F1 127 aa20.16■□□□□ 0.82
RETREG3-210ENST00000590541 H3BRB1 525 aa20.16■□□□□ 0.82
RETREG3-210ENST00000590541 NCK2O43639 380 aa20.16■□□□□ 0.82
RETREG3-210ENST00000590541 CAND2O75155 1236 aa20.16■□□□□ 0.82
RETREG3-210ENST00000590541 SMIM10L2AP0DMW4 78 aa20.16■□□□□ 0.82
RETREG3-210ENST00000590541 SMIM10L2BP0DMW5 78 aa20.16■□□□□ 0.82
RETREG3-210ENST00000590541 CLUL1Q15846 466 aa20.16■□□□□ 0.82
RETREG3-210ENST00000590541 STOX1Q6ZVD7 989 aa20.16■□□□□ 0.82
RETREG3-210ENST00000590541 VSIG10LQ86VR7 867 aa20.16■□□□□ 0.82
RETREG3-210ENST00000590541 IL31RAQ8NI17 732 aa20.16■□□□□ 0.82
RETREG3-210ENST00000590541 GPKOWQ92917 476 aaPredicted RBP eCLIP20.16■□□□□ 0.82
RETREG3-210ENST00000590541 SNX27Q96L92 541 aa20.16■□□□□ 0.82
RETREG3-210ENST00000590541 OSBPL3Q9H4L5 887 aa20.16■□□□□ 0.82
RETREG3-210ENST00000590541 TUT1Q9H6E5 874 aaKnown RBP20.16■□□□□ 0.82
RETREG3-210ENST00000590541 KAT14Q9H8E8 782 aa20.16■□□□□ 0.82
RETREG3-210ENST00000590541 CCDC171Q6TFL3 1326 aa20.16■□□□□ 0.82
RETREG3-210ENST00000590541 GRM6O15303 877 aa20.15■□□□□ 0.82
RETREG3-210ENST00000590541 DHX16O60231 1041 aaKnown RBP20.15■□□□□ 0.82
RETREG3-210ENST00000590541 LGALS2P05162 132 aa20.15■□□□□ 0.82
RETREG3-210ENST00000590541 CTNNB1P35222 781 aa20.15■□□□□ 0.82
RETREG3-210ENST00000590541 NUCB1Q02818 461 aa20.15■□□□□ 0.82
RETREG3-210ENST00000590541 PGM5Q15124 567 aa20.15■□□□□ 0.82
RETREG3-210ENST00000590541 RNF135Q8IUD6 432 aa20.15■□□□□ 0.82
RETREG3-210ENST00000590541 FIBCD1Q8N539 461 aa20.15■□□□□ 0.82
RETREG3-210ENST00000590541 APBB2Q92870 758 aa20.15■□□□□ 0.82
RETREG3-210ENST00000590541 IL17RAQ96F46 866 aa20.15■□□□□ 0.82
RETREG3-210ENST00000590541 ZFP91Q96JP5 570 aaPredicted RBP20.15■□□□□ 0.82
RETREG3-210ENST00000590541 LMAN2LQ9H0V9 348 aa20.15■□□□□ 0.82
RETREG3-210ENST00000590541 BCAS3Q9H6U6 928 aa20.15■□□□□ 0.82
RETREG3-210ENST00000590541 SUPT16HQ9Y5B9 1047 aaKnown RBP20.15■□□□□ 0.82
RETREG3-210ENST00000590541 MYH6P13533 1939 aa20.15■□□□□ 0.82
RETREG3-210ENST00000590541 MYO7AQ13402 2215 aa20.15■□□□□ 0.82
RETREG3-210ENST00000590541 C5orf42Q9H799 3197 aa20.15■□□□□ 0.82
RETREG3-210ENST00000590541 PPP1R11O60927 126 aaPredicted RBP20.14■□□□□ 0.81
RETREG3-210ENST00000590541 KDM4AO75164 1064 aa20.14■□□□□ 0.81
RETREG3-210ENST00000590541 RB1P06400 928 aa20.14■□□□□ 0.81
RETREG3-210ENST00000590541 TGFB3P10600 412 aa20.14■□□□□ 0.81
RETREG3-210ENST00000590541 BMPR1AP36894 532 aa20.14■□□□□ 0.81
RETREG3-210ENST00000590541 IQCA1Q86XH1 822 aa20.14■□□□□ 0.81
RETREG3-210ENST00000590541 PRSS33Q8NF86 280 aa20.14■□□□□ 0.81
RETREG3-210ENST00000590541 POP1Q99575 1024 aaKnown RBP20.14■□□□□ 0.81
RETREG3-210ENST00000590541 AMNQ9BXJ7 453 aa20.14■□□□□ 0.81
RETREG3-210ENST00000590541 MLXIPQ9HAP2 919 aa20.14■□□□□ 0.81
RETREG3-210ENST00000590541 TBX10O75333 385 aa20.13■□□□□ 0.81
RETREG3-210ENST00000590541 IGHDP01880 384 aa20.13■□□□□ 0.81
RETREG3-210ENST00000590541 PARP1P09874 1014 aaKnown RBP20.13■□□□□ 0.81
RETREG3-210ENST00000590541 HOXA13P31271 388 aaPredicted RBP20.13■□□□□ 0.81
RETREG3-210ENST00000590541 GTF2F1P35269 517 aaKnown RBP eCLIP20.13■□□□□ 0.81
RETREG3-210ENST00000590541 CCDC178Q5BJE1 867 aa20.13■□□□□ 0.81
RETREG3-210ENST00000590541 B4GALNT3Q6L9W6 998 aa20.13■□□□□ 0.81
RETREG3-210ENST00000590541 ENAHQ8N8S7 591 aaPredicted RBP20.13■□□□□ 0.81
RETREG3-210ENST00000590541 ZSCAN10Q96SZ4 725 aaPredicted RBP20.13■□□□□ 0.81
RETREG3-210ENST00000590541 C11orf84Q9BUA3 381 aaPredicted RBP20.13■□□□□ 0.81
RETREG3-210ENST00000590541 RC3H2Q9HBD1 1191 aaKnown RBP20.13■□□□□ 0.81
RETREG3-210ENST00000590541 SETD4Q9NVD3 440 aa20.13■□□□□ 0.81
RETREG3-210ENST00000590541 MAP3K20Q9NYL2 800 aaKnown RBP20.13■□□□□ 0.81
RETREG3-210ENST00000590541 TRIM6-TRIM34B2RNG4 842 aa20.12■□□□□ 0.81
RETREG3-210ENST00000590541 MFAP1P55081 439 aaKnown RBP20.12■□□□□ 0.81
RETREG3-210ENST00000590541 SMAD4Q13485 552 aaKnown RBP20.12■□□□□ 0.81
RETREG3-210ENST00000590541 FAM26DQ5JW98 314 aa20.12■□□□□ 0.81
RETREG3-210ENST00000590541 STAG2Q8N3U4 1231 aa20.12■□□□□ 0.81
RETREG3-210ENST00000590541 EDAQ92838 391 aa20.12■□□□□ 0.81
RETREG3-210ENST00000590541 TECTAO75443 2155 aa20.12■□□□□ 0.81
RETREG3-210ENST00000590541 ADGRA3Q8IWK6 1321 aa20.11■□□□□ 0.81
RETREG3-210ENST00000590541 B4E1Z4 1266 aa20.11■□□□□ 0.81
RETREG3-210ENST00000590541 ZNF213O14771 459 aa20.11■□□□□ 0.81
RETREG3-210ENST00000590541 LINC01565O15544 149 aa20.11■□□□□ 0.81
RETREG3-210ENST00000590541 NT5C2P49902 561 aa20.11■□□□□ 0.81
RETREG3-210ENST00000590541 ADAM17P78536 824 aa20.11■□□□□ 0.81
RETREG3-210ENST00000590541 IER5LQ5T953 404 aa20.11■□□□□ 0.81
RETREG3-210ENST00000590541 BMP8AQ7Z5Y6 402 aa20.11■□□□□ 0.81
RETREG3-210ENST00000590541 PLEKHM2Q8IWE5 1019 aa20.11■□□□□ 0.81
RETREG3-210ENST00000590541 CLP1Q92989 425 aaKnown RBP20.11■□□□□ 0.81
RETREG3-210ENST00000590541 MTMR8Q96EF0 704 aa20.11■□□□□ 0.81
RETREG3-210ENST00000590541 IGFLR1Q9H665 355 aa20.11■□□□□ 0.81
RETREG3-210ENST00000590541 RWDD3Q9Y3V2 267 aa20.11■□□□□ 0.81
RETREG3-210ENST00000590541 TRIOO75962 3097 aa20.11■□□□□ 0.81
RETREG3-210ENST00000590541 STXBP3O00186 592 aa20.1■□□□□ 0.81
RETREG3-210ENST00000590541 CCND2P30279 289 aa20.1■□□□□ 0.81
RETREG3-210ENST00000590541 CAMK1Q14012 370 aa20.1■□□□□ 0.81
RETREG3-210ENST00000590541 SAMD3Q8N6K7 520 aa20.1■□□□□ 0.81
RETREG3-210ENST00000590541 RILPL2Q969X0 211 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms