RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 DRC1Q96MC2 740 aa13.65□□□□□ -0.22
PDE4A-207ENST00000590407 GDAP1L1Q96MZ0 367 aa13.65□□□□□ -0.22
PDE4A-207ENST00000590407 RUFY1Q96T51 708 aa13.65□□□□□ -0.22
PDE4A-207ENST00000590407 MTMR7Q9Y216 660 aa13.65□□□□□ -0.22
PDE4A-207ENST00000590407 PITPNM2Q9BZ72 1349 aa13.64□□□□□ -0.23
PDE4A-207ENST00000590407 POTEMA6NI47 508 aa13.64□□□□□ -0.23
PDE4A-207ENST00000590407 NOP2P46087 812 aaKnown RBP13.64□□□□□ -0.23
PDE4A-207ENST00000590407 CCDC40Q4G0X9 1142 aa13.64□□□□□ -0.23
PDE4A-207ENST00000590407 SPATS2Q86XZ4 545 aaKnown RBP13.64□□□□□ -0.23
PDE4A-207ENST00000590407 HAS1Q92839 578 aa13.64□□□□□ -0.23
PDE4A-207ENST00000590407 NUDT12Q9BQG2 462 aa13.64□□□□□ -0.23
PDE4A-207ENST00000590407 UBA5Q9GZZ9 404 aa13.64□□□□□ -0.23
PDE4A-207ENST00000590407 GANQ9H2C0 597 aa13.64□□□□□ -0.23
PDE4A-207ENST00000590407 VAT1LQ9HCJ6 419 aa13.64□□□□□ -0.23
PDE4A-207ENST00000590407 PANK4Q9NVE7 773 aa13.64□□□□□ -0.23
PDE4A-207ENST00000590407 TMEM59LQ9UK28 342 aa13.64□□□□□ -0.23
PDE4A-207ENST00000590407 RTCBQ9Y3I0 505 aaKnown RBP13.64□□□□□ -0.23
PDE4A-207ENST00000590407 TRAF5O00463 557 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 EBAG9O00559 213 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 MRPL12P52815 198 aaKnown RBP13.63□□□□□ -0.23
PDE4A-207ENST00000590407 ZNF543Q08ER8 600 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 TTC31Q49AM3 519 aaPredicted RBP13.63□□□□□ -0.23
PDE4A-207ENST00000590407 TDRD12Q587J7 1177 aaKnown RBP13.63□□□□□ -0.23
PDE4A-207ENST00000590407 CERKQ8TCT0 537 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 CUL5Q93034 780 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 MBOAT7Q96N66 472 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 PAGR1Q9BTK6 254 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 LSM14BQ9BX40 385 aaKnown RBP13.63□□□□□ -0.23
PDE4A-207ENST00000590407 TANGO6Q9C0B7 1094 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 KCTD10Q9H3F6 313 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 PLCB1Q9NQ66 1216 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 DDX25Q9UHL0 483 aaKnown RBP13.63□□□□□ -0.23
PDE4A-207ENST00000590407 ATF5Q9Y2D1 282 aaPredicted RBP13.63□□□□□ -0.23
PDE4A-207ENST00000590407 BZW2Q9Y6E2 419 aaKnown RBP13.63□□□□□ -0.23
PDE4A-207ENST00000590407 CYP3A7-CYP3A51PA0A087WV96 503 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 SHTN1A0MZ66 631 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 BHMG1C9JSJ3 638 aaPredicted RBP13.63□□□□□ -0.23
PDE4A-207ENST00000590407 GNPATO15228 680 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 NCK2O43639 380 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 PALMO75781 387 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 CYP3A7P24462 503 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 CXCR5P32302 372 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 SLC7A5Q01650 507 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 NFIXQ14938 502 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 CDC37Q16543 378 aaPredicted RBP13.63□□□□□ -0.23
PDE4A-207ENST00000590407 TTMPQ5BVD1 217 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 GPATCH4Q5T3I0 446 aaKnown RBP13.63□□□□□ -0.23
PDE4A-207ENST00000590407 MOXD1Q6UVY6 613 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 KDM7AQ6ZMT4 941 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 TADA2BQ86TJ2 420 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 COA7Q96BR5 231 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 SUGT1Q9Y2Z0 365 aa13.63□□□□□ -0.23
PDE4A-207ENST00000590407 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.63□□□□□ -0.23
PDE4A-207ENST00000590407 KIF13BQ9NQT8 1826 aa13.62□□□□□ -0.23
PDE4A-207ENST00000590407 GLI1P08151 1106 aa13.62□□□□□ -0.23
PDE4A-207ENST00000590407 GNGT1P63211 74 aa13.62□□□□□ -0.23
PDE4A-207ENST00000590407 TNNC1P63316 161 aa13.62□□□□□ -0.23
PDE4A-207ENST00000590407 LRRC41Q15345 812 aa13.62□□□□□ -0.23
PDE4A-207ENST00000590407 ECM1Q16610 540 aa13.62□□□□□ -0.23
PDE4A-207ENST00000590407 IFI16Q16666 785 aaKnown RBP13.62□□□□□ -0.23
PDE4A-207ENST00000590407 CRY2Q49AN0 593 aa13.62□□□□□ -0.23
PDE4A-207ENST00000590407 GLIS3Q8NEA6 775 aa13.62□□□□□ -0.23
PDE4A-207ENST00000590407 ARHGEF1Q92888 912 aaKnown RBP13.62□□□□□ -0.23
PDE4A-207ENST00000590407 PBKQ96KB5 322 aa13.62□□□□□ -0.23
PDE4A-207ENST00000590407 ZIM3Q96PE6 472 aa13.62□□□□□ -0.23
PDE4A-207ENST00000590407 JMJD4Q9H9V9 463 aa13.62□□□□□ -0.23
PDE4A-207ENST00000590407 FBXL5Q9UKA1 691 aa13.62□□□□□ -0.23
PDE4A-207ENST00000590407 PCDHA12Q9UN75 941 aa13.62□□□□□ -0.23
PDE4A-207ENST00000590407 GREB1LQ9C091 1923 aaPredicted RBP13.62□□□□□ -0.23
PDE4A-207ENST00000590407 BUB1O43683 1085 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 HEXIM1O94992 359 aaKnown RBP13.61□□□□□ -0.23
PDE4A-207ENST00000590407 TTLL1O95922 423 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 KLRC1P26715 233 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 HSPA9P38646 679 aaKnown RBP13.61□□□□□ -0.23
PDE4A-207ENST00000590407 TNNI2P48788 182 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 USP11P51784 963 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 POLR2FP61218 127 aaKnown RBP13.61□□□□□ -0.23
PDE4A-207ENST00000590407 GPSM2P81274 684 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 ASIC2Q16515 512 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 CFAP58Q5T655 872 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 MCTP2Q6DN12 878 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 LRIG3Q6UXM1 1119 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.61□□□□□ -0.23
PDE4A-207ENST00000590407 B4GALNT4Q76KP1 1039 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 FRMD5Q7Z6J6 570 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 USP38Q8NB14 1042 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 BCAS4Q8TDM0 211 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 ARL8AQ96BM9 186 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 CALR3Q96L12 384 aaKnown RBP13.61□□□□□ -0.23
PDE4A-207ENST00000590407 MXD3Q9BW11 206 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 KCNMB3Q9NPA1 279 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 NLRC4Q9NPP4 1024 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 STK24Q9Y6E0 443 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 BTAF1O14981 1849 aa13.61□□□□□ -0.23
PDE4A-207ENST00000590407 CETN3O15182 167 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 PLA2G4BP0C869 781 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 PRKCIP41743 596 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 MATR3P43243 847 aaKnown RBP eCLIP13.6□□□□□ -0.23
PDE4A-207ENST00000590407 CARSP49589 748 aaKnown RBP13.6□□□□□ -0.23
PDE4A-207ENST00000590407 KLHL30Q0D2K2 578 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms