RNA–Protein interactions for RNA: ENST00000589923.1

GRN-216, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 437 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-216ENST00000589923 NSUN3Q9H649 340 aaKnown RBP12.67□□□□□ -0.38
GRN-216ENST00000589923 RC3H2Q9HBD1 1191 aaKnown RBP12.67□□□□□ -0.38
GRN-216ENST00000589923 KMT2EQ8IZD2 1858 aa12.67□□□□□ -0.38
GRN-216ENST00000589923 KDM4AO75164 1064 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 TBX10O75333 385 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 UPP2O95045 317 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 CFBP00751 764 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 SMIM10L2AP0DMW4 78 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 SMIM10L2BP0DMW5 78 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 PCP11498 1178 aaKnown RBP12.66□□□□□ -0.38
GRN-216ENST00000589923 HYAL1Q12794 435 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 PGM5Q15124 567 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 PTPROQ16827 1216 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 STOX1Q6ZVD7 989 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 MCF2L2Q86YR7 1114 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 STAG2Q8N3U4 1231 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 SPATA33Q96N06 139 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 SAMD11Q96NU1 681 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 YME1L1Q96TA2 773 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 CLDND1Q9NY35 253 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 PRKAG3Q9UGI9 489 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 CTNNA3Q9UI47 895 aa12.66□□□□□ -0.38
GRN-216ENST00000589923 C17orf102A2RUQ5 167 aa12.65□□□□□ -0.38
GRN-216ENST00000589923 C5orf67F2Z3F1 127 aa12.65□□□□□ -0.38
GRN-216ENST00000589923 GRM6O15303 877 aa12.65□□□□□ -0.38
GRN-216ENST00000589923 LGALS2P05162 132 aa12.65□□□□□ -0.38
GRN-216ENST00000589923 MYCLP12524 364 aaPredicted RBP12.65□□□□□ -0.38
GRN-216ENST00000589923 HOXA13P31271 388 aaPredicted RBP12.65□□□□□ -0.38
GRN-216ENST00000589923 GTF2F1P35269 517 aaKnown RBP eCLIP12.65□□□□□ -0.38
GRN-216ENST00000589923 ADAM17P78536 824 aa12.65□□□□□ -0.38
GRN-216ENST00000589923 SMAD2Q15796 467 aaKnown RBP12.65□□□□□ -0.38
GRN-216ENST00000589923 CLUL1Q15846 466 aa12.65□□□□□ -0.38
GRN-216ENST00000589923 CSPP1Q1MSJ5 1256 aa12.65□□□□□ -0.38
GRN-216ENST00000589923 ASPRV1Q53RT3 343 aa12.65□□□□□ -0.38
GRN-216ENST00000589923 VSIG10LQ86VR7 867 aa12.65□□□□□ -0.38
GRN-216ENST00000589923 TRIM50Q86XT4 487 aa12.65□□□□□ -0.38
GRN-216ENST00000589923 ESR2Q92731 530 aa12.65□□□□□ -0.38
GRN-216ENST00000589923 ATP6V0A1Q93050 837 aa12.65□□□□□ -0.38
GRN-216ENST00000589923 MTMR8Q96EF0 704 aa12.65□□□□□ -0.38
GRN-216ENST00000589923 IFIH1Q9BYX4 1025 aaKnown RBP12.65□□□□□ -0.38
GRN-216ENST00000589923 RNPEPQ9H4A4 650 aa12.65□□□□□ -0.38
GRN-216ENST00000589923 MUTYHQ9UIF7 546 aa12.65□□□□□ -0.38
GRN-216ENST00000589923 MRPL11Q9Y3B7 192 aaKnown RBP12.65□□□□□ -0.38
GRN-216ENST00000589923 B4E1Z4 1266 aa12.64□□□□□ -0.39
GRN-216ENST00000589923 H3BRB1 525 aa12.64□□□□□ -0.39
GRN-216ENST00000589923 LINC01565O15544 149 aa12.64□□□□□ -0.39
GRN-216ENST00000589923 MBTPS2O43462 519 aa12.64□□□□□ -0.39
GRN-216ENST00000589923 SEMA3FQ13275 785 aa12.64□□□□□ -0.39
GRN-216ENST00000589923 CAMK1Q14012 370 aa12.64□□□□□ -0.39
GRN-216ENST00000589923 HERC4Q5GLZ8 1057 aaPredicted RBP12.64□□□□□ -0.39
GRN-216ENST00000589923 EP400NLQ6ZTU2 488 aa12.64□□□□□ -0.39
GRN-216ENST00000589923 PRSS33Q8NF86 280 aa12.64□□□□□ -0.39
GRN-216ENST00000589923 SEPT8Q92599 483 aa12.64□□□□□ -0.39
GRN-216ENST00000589923 ZSCAN10Q96SZ4 725 aaPredicted RBP12.64□□□□□ -0.39
GRN-216ENST00000589923 KCNH6Q9H252 994 aa12.64□□□□□ -0.39
GRN-216ENST00000589923 TUT1Q9H6E5 874 aaKnown RBP12.64□□□□□ -0.39
GRN-216ENST00000589923 KAT14Q9H8E8 782 aa12.64□□□□□ -0.39
GRN-216ENST00000589923 VAT1LQ9HCJ6 419 aa12.64□□□□□ -0.39
GRN-216ENST00000589923 ALG13Q9NP73 1137 aaKnown RBP12.64□□□□□ -0.39
GRN-216ENST00000589923 BAZ2BQ9UIF8 2168 aaKnown RBP12.64□□□□□ -0.39
GRN-216ENST00000589923 TTC3P53804 2025 aa12.63□□□□□ -0.39
GRN-216ENST00000589923 CTNNB1P35222 781 aa12.63□□□□□ -0.39
GRN-216ENST00000589923 ANKRD45Q5TZF3 282 aa12.63□□□□□ -0.39
GRN-216ENST00000589923 AMNQ9BXJ7 453 aa12.63□□□□□ -0.39
GRN-216ENST00000589923 RNF41Q9H4P4 317 aaPredicted RBP12.63□□□□□ -0.39
GRN-216ENST00000589923 SETD4Q9NVD3 440 aa12.63□□□□□ -0.39
GRN-216ENST00000589923 ZSWIM5Q9P217 1185 aa12.63□□□□□ -0.39
GRN-216ENST00000589923 ZDBF2Q9HCK1 2354 aa12.63□□□□□ -0.39
GRN-216ENST00000589923 FRMPD4Q14CM0 1322 aa12.62□□□□□ -0.39
GRN-216ENST00000589923 ADGRA3Q8IWK6 1321 aa12.62□□□□□ -0.39
GRN-216ENST00000589923 WDR87Q6ZQQ6 2873 aa12.62□□□□□ -0.39
GRN-216ENST00000589923 PLXNA4Q9HCM2 1894 aa12.62□□□□□ -0.39
GRN-216ENST00000589923 CAND2O75155 1236 aa12.62□□□□□ -0.39
GRN-216ENST00000589923 CHRNA1P02708 482 aa12.62□□□□□ -0.39
GRN-216ENST00000589923 PARP1P09874 1014 aaKnown RBP12.62□□□□□ -0.39
GRN-216ENST00000589923 MRPS9P82933 396 aaKnown RBP12.62□□□□□ -0.39
GRN-216ENST00000589923 FAM26DQ5JW98 314 aa12.62□□□□□ -0.39
GRN-216ENST00000589923 IER5LQ5T953 404 aa12.62□□□□□ -0.39
GRN-216ENST00000589923 RNF135Q8IUD6 432 aa12.62□□□□□ -0.39
GRN-216ENST00000589923 LMBR1Q8WVP7 490 aa12.62□□□□□ -0.39
GRN-216ENST00000589923 LINC01599Q8WXQ3 324 aa12.62□□□□□ -0.39
GRN-216ENST00000589923 CLP1Q92989 425 aaKnown RBP12.62□□□□□ -0.39
GRN-216ENST00000589923 SNX27Q96L92 541 aa12.62□□□□□ -0.39
GRN-216ENST00000589923 MAD2L2Q9UI95 211 aa12.62□□□□□ -0.39
GRN-216ENST00000589923 ZNF213O14771 459 aa12.61□□□□□ -0.39
GRN-216ENST00000589923 ZBTB5O15062 677 aa12.61□□□□□ -0.39
GRN-216ENST00000589923 DHX16O60231 1041 aaKnown RBP12.61□□□□□ -0.39
GRN-216ENST00000589923 CSPG5O95196 566 aa12.61□□□□□ -0.39
GRN-216ENST00000589923 TGFB3P10600 412 aa12.61□□□□□ -0.39
GRN-216ENST00000589923 DNAJB1P25685 340 aa12.61□□□□□ -0.39
GRN-216ENST00000589923 BMPR1AP36894 532 aa12.61□□□□□ -0.39
GRN-216ENST00000589923 MGAT3Q09327 533 aa12.61□□□□□ -0.39
GRN-216ENST00000589923 SMAD4Q13485 552 aaKnown RBP12.61□□□□□ -0.39
GRN-216ENST00000589923 SEC23AQ15436 765 aa12.61□□□□□ -0.39
GRN-216ENST00000589923 KCNV1Q6PIU1 500 aa12.61□□□□□ -0.39
GRN-216ENST00000589923 RUFY4Q6ZNE9 571 aa12.61□□□□□ -0.39
GRN-216ENST00000589923 IQCA1Q86XH1 822 aa12.61□□□□□ -0.39
GRN-216ENST00000589923 TICAM2Q86XR7 235 aa12.61□□□□□ -0.39
GRN-216ENST00000589923 FIBCD1Q8N539 461 aa12.61□□□□□ -0.39
GRN-216ENST00000589923 ZNF689Q96CS4 500 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms