RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 NOD1Q9Y239 953 aa21.81■■□□□ 1.08
TPM4-204ENST00000586499 RBAK-RBAKDNI3L0D1 243 aa21.8■■□□□ 1.08
TPM4-204ENST00000586499 SEC24BO95487 1268 aa21.8■■□□□ 1.08
TPM4-204ENST00000586499 LGALS2P05162 132 aa21.8■■□□□ 1.08
TPM4-204ENST00000586499 KCNA2P16389 499 aa21.8■■□□□ 1.08
TPM4-204ENST00000586499 IFNAR1P17181 557 aa21.8■■□□□ 1.08
TPM4-204ENST00000586499 CLK2P49760 499 aaKnown RBP21.8■■□□□ 1.08
TPM4-204ENST00000586499 ZNF200P98182 395 aaPredicted RBP21.8■■□□□ 1.08
TPM4-204ENST00000586499 JAKMIP3Q5VZ66 844 aa21.8■■□□□ 1.08
TPM4-204ENST00000586499 SENP7Q9BQF6 1050 aa21.8■■□□□ 1.08
TPM4-204ENST00000586499 JADE2Q9NQC1 790 aa21.8■■□□□ 1.08
TPM4-204ENST00000586499 FOSP01100 380 aaPredicted RBP21.79■■□□□ 1.08
TPM4-204ENST00000586499 AKAP17AQ02040 695 aaKnown RBP21.79■■□□□ 1.08
TPM4-204ENST00000586499 MTMR1Q13613 665 aa21.79■■□□□ 1.08
TPM4-204ENST00000586499 FAM109BQ6ICB4 259 aaPredicted RBP21.79■■□□□ 1.08
TPM4-204ENST00000586499 ZNF274Q96GC6 653 aaPredicted RBP21.79■■□□□ 1.08
TPM4-204ENST00000586499 MXRA8Q9BRK3 442 aa21.79■■□□□ 1.08
TPM4-204ENST00000586499 RNF26Q9BY78 433 aaPredicted RBP21.79■■□□□ 1.08
TPM4-204ENST00000586499 EHMT1Q9H9B1 1298 aa21.79■■□□□ 1.08
TPM4-204ENST00000586499 H3BRB1 525 aa21.78■■□□□ 1.08
TPM4-204ENST00000586499 FGBP02675 491 aa21.78■■□□□ 1.08
TPM4-204ENST00000586499 UTP14CQ5TAP6 766 aaKnown RBP21.78■■□□□ 1.08
TPM4-204ENST00000586499 PSRC1Q6PGN9 363 aaPredicted RBP21.78■■□□□ 1.08
TPM4-204ENST00000586499 DEFB128Q7Z7B8 93 aa21.78■■□□□ 1.08
TPM4-204ENST00000586499 TRIM50Q86XT4 487 aa21.78■■□□□ 1.08
TPM4-204ENST00000586499 DHX38Q92620 1227 aaKnown RBP21.78■■□□□ 1.08
TPM4-204ENST00000586499 CDHR1Q96JP9 859 aa21.78■■□□□ 1.08
TPM4-204ENST00000586499 FAM161BQ96MY7 647 aa21.78■■□□□ 1.08
TPM4-204ENST00000586499 ZMYND12Q9H0C1 365 aa21.78■■□□□ 1.08
TPM4-204ENST00000586499 TUT1Q9H6E5 874 aaKnown RBP21.78■■□□□ 1.08
TPM4-204ENST00000586499 CXXC1Q9P0U4 656 aaPredicted RBP21.78■■□□□ 1.08
TPM4-204ENST00000586499 IQCF3P0C7M6 154 aa21.77■■□□□ 1.08
TPM4-204ENST00000586499 SMAD3P84022 425 aaKnown RBP21.77■■□□□ 1.08
TPM4-204ENST00000586499 AP3B2Q13367 1082 aa21.77■■□□□ 1.08
TPM4-204ENST00000586499 RASIP1Q5U651 963 aa21.77■■□□□ 1.08
TPM4-204ENST00000586499 OTOP2Q7RTS6 562 aa21.77■■□□□ 1.08
TPM4-204ENST00000586499 RETREG2Q8NC44 543 aa21.77■■□□□ 1.08
TPM4-204ENST00000586499 GLT8D2Q9H1C3 349 aa21.77■■□□□ 1.08
TPM4-204ENST00000586499 C6orf50Q9HD87 102 aa21.77■■□□□ 1.08
TPM4-204ENST00000586499 KCNH7Q9NS40 1196 aa21.77■■□□□ 1.08
TPM4-204ENST00000586499 VPS54Q9P1Q0 977 aa21.77■■□□□ 1.08
TPM4-204ENST00000586499 SCN5AQ14524 2016 aa21.77■■□□□ 1.07
TPM4-204ENST00000586499 ESYT2A0FGR8 921 aa21.76■■□□□ 1.07
TPM4-204ENST00000586499 GRXCR1A8MXD5 290 aa21.76■■□□□ 1.07
TPM4-204ENST00000586499 DTNBO60941 627 aa21.76■■□□□ 1.07
TPM4-204ENST00000586499 ARP10275 920 aa21.76■■□□□ 1.07
TPM4-204ENST00000586499 SREBF1P36956 1147 aa21.76■■□□□ 1.07
TPM4-204ENST00000586499 BFSP2Q13515 415 aa21.76■■□□□ 1.07
TPM4-204ENST00000586499 TEX2Q8IWB9 1127 aa21.76■■□□□ 1.07
TPM4-204ENST00000586499 RPUSD2Q8IZ73 545 aaKnown RBP21.76■■□□□ 1.07
TPM4-204ENST00000586499 GIMAP8Q8ND71 665 aaPredicted RBP21.76■■□□□ 1.07
TPM4-204ENST00000586499 RASGRP4Q8TDF6 673 aa21.76■■□□□ 1.07
TPM4-204ENST00000586499 WNT8BQ93098 351 aa21.76■■□□□ 1.07
TPM4-204ENST00000586499 MTMR10Q9NXD2 777 aa21.76■■□□□ 1.07
TPM4-204ENST00000586499 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.75■■□□□ 1.07
TPM4-204ENST00000586499 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.75■■□□□ 1.07
TPM4-204ENST00000586499 GSTTP1A0A1W2PQM5 241 aa21.75■■□□□ 1.07
TPM4-204ENST00000586499 PITPNM1O00562 1244 aa21.75■■□□□ 1.07
TPM4-204ENST00000586499 MAFGO15525 162 aa21.75■■□□□ 1.07
TPM4-204ENST00000586499 ANAPC15P60006 121 aa21.75■■□□□ 1.07
TPM4-204ENST00000586499 ARHGAP4P98171 946 aa21.75■■□□□ 1.07
TPM4-204ENST00000586499 SSRP1Q08945 709 aaKnown RBP21.75■■□□□ 1.07
TPM4-204ENST00000586499 CEP55Q53EZ4 464 aa21.75■■□□□ 1.07
TPM4-204ENST00000586499 CCDC12Q8WUD4 166 aaPredicted RBP21.75■■□□□ 1.07
TPM4-204ENST00000586499 HERVK_113Q902F9 699 aa21.75■■□□□ 1.07
TPM4-204ENST00000586499 TPCN1Q9ULQ1 816 aa21.75■■□□□ 1.07
TPM4-204ENST00000586499 TRIP12Q14669 1992 aaPredicted RBP21.75■■□□□ 1.07
TPM4-204ENST00000586499 CPLX1O14810 134 aa21.74■■□□□ 1.07
TPM4-204ENST00000586499 SMIM10L2AP0DMW4 78 aa21.74■■□□□ 1.07
TPM4-204ENST00000586499 SMIM10L2BP0DMW5 78 aa21.74■■□□□ 1.07
TPM4-204ENST00000586499 TCF7P36402 384 aaPredicted RBP21.74■■□□□ 1.07
TPM4-204ENST00000586499 REXO1Q8N1G1 1221 aaKnown RBP21.74■■□□□ 1.07
TPM4-204ENST00000586499 UIMC1Q96RL1 719 aa21.74■■□□□ 1.07
TPM4-204ENST00000586499 RNPEPQ9H4A4 650 aa21.74■■□□□ 1.07
TPM4-204ENST00000586499 C17orf102A2RUQ5 167 aa21.73■■□□□ 1.07
TPM4-204ENST00000586499 FAM86B1E9PN63 330 aa21.73■■□□□ 1.07
TPM4-204ENST00000586499 MEIS1O00470 390 aa21.73■■□□□ 1.07
TPM4-204ENST00000586499 FAM86B2P0C5J1 330 aa21.73■■□□□ 1.07
TPM4-204ENST00000586499 CKBP12277 381 aa21.73■■□□□ 1.07
TPM4-204ENST00000586499 GNA11P29992 359 aa21.73■■□□□ 1.07
TPM4-204ENST00000586499 ZNF76P36508 570 aa21.73■■□□□ 1.07
TPM4-204ENST00000586499 AK2P54819 239 aa21.73■■□□□ 1.07
TPM4-204ENST00000586499 SCRN1Q12765 414 aa21.73■■□□□ 1.07
TPM4-204ENST00000586499 PTK7Q13308 1070 aa21.73■■□□□ 1.07
TPM4-204ENST00000586499 GPNMBQ14956 572 aa21.73■■□□□ 1.07
TPM4-204ENST00000586499 CAGE1Q8TC20 777 aa21.73■■□□□ 1.07
TPM4-204ENST00000586499 CRYGNQ8WXF5 182 aa21.73■■□□□ 1.07
TPM4-204ENST00000586499 SEPT1Q8WYJ6 367 aa21.73■■□□□ 1.07
TPM4-204ENST00000586499 AIFM3Q96NN9 605 aa21.73■■□□□ 1.07
TPM4-204ENST00000586499 SETD4Q9NVD3 440 aa21.73■■□□□ 1.07
TPM4-204ENST00000586499 PBX2P40425 430 aa21.72■■□□□ 1.07
TPM4-204ENST00000586499 ITGB3BPQ13352 177 aaPredicted RBP21.72■■□□□ 1.07
TPM4-204ENST00000586499 TRIM71Q2Q1W2 868 aaKnown RBP21.72■■□□□ 1.07
TPM4-204ENST00000586499 ZNF697Q5TEC3 545 aa21.72■■□□□ 1.07
TPM4-204ENST00000586499 TRIM22Q8IYM9 498 aa21.72■■□□□ 1.07
TPM4-204ENST00000586499 CCDC155Q8N6L0 562 aa21.72■■□□□ 1.07
TPM4-204ENST00000586499 AFAP1L1Q8TED9 768 aa21.72■■□□□ 1.07
TPM4-204ENST00000586499 ATP6V0A1Q93050 837 aa21.72■■□□□ 1.07
TPM4-204ENST00000586499 TTYH1Q9H313 450 aaPredicted RBP21.72■■□□□ 1.07
TPM4-204ENST00000586499 SEMA6BQ9H3T3 888 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms