RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 PTGS1P23219 599 aa18.17■□□□□ 0.5
CSNK1D-223ENST00000584472 SREBF1P36956 1147 aa18.17■□□□□ 0.5
CSNK1D-223ENST00000584472 ARHGAP1Q07960 439 aa18.17■□□□□ 0.5
CSNK1D-223ENST00000584472 RESTQ13127 1097 aa18.17■□□□□ 0.5
CSNK1D-223ENST00000584472 LY6KQ17RY6 165 aa18.17■□□□□ 0.5
CSNK1D-223ENST00000584472 PIK3AP1Q6ZUJ8 805 aa18.17■□□□□ 0.5
CSNK1D-223ENST00000584472 ANKRD33Q7Z3H0 272 aa18.17■□□□□ 0.5
CSNK1D-223ENST00000584472 FERMT3Q86UX7 667 aa18.17■□□□□ 0.5
CSNK1D-223ENST00000584472 NOSTRINQ8IVI9 506 aa18.17■□□□□ 0.5
CSNK1D-223ENST00000584472 GLT1D1Q96MS3 346 aa18.17■□□□□ 0.5
CSNK1D-223ENST00000584472 POLR3EQ9NVU0 708 aa18.17■□□□□ 0.5
CSNK1D-223ENST00000584472 CIZ1Q9ULV3 898 aaPredicted RBP18.17■□□□□ 0.5
CSNK1D-223ENST00000584472 ZDHHC9Q9Y397 364 aa18.17■□□□□ 0.5
CSNK1D-223ENST00000584472 LAMA2P24043 3122 aaKnown RBP18.17■□□□□ 0.5
CSNK1D-223ENST00000584472 FAM205CA6NFA0 338 aa18.16■□□□□ 0.5
CSNK1D-223ENST00000584472 SPATA31C2B4DYI2 1134 aa18.16■□□□□ 0.5
CSNK1D-223ENST00000584472 KPNA6O60684 536 aa18.16■□□□□ 0.5
CSNK1D-223ENST00000584472 NUCB2P80303 420 aa18.16■□□□□ 0.5
CSNK1D-223ENST00000584472 LAMC2Q13753 1193 aa18.16■□□□□ 0.5
CSNK1D-223ENST00000584472 NONOQ15233 471 aaKnown RBP eCLIP18.16■□□□□ 0.52e-6■■■□□ 17.9
CSNK1D-223ENST00000584472 NLRX1Q86UT6 975 aa18.16■□□□□ 0.5
CSNK1D-223ENST00000584472 COPS5Q92905 334 aa18.16■□□□□ 0.5
CSNK1D-223ENST00000584472 GPRASP2Q96D09 838 aa18.16■□□□□ 0.5
CSNK1D-223ENST00000584472 CDHR1Q96JP9 859 aa18.16■□□□□ 0.5
CSNK1D-223ENST00000584472 STARD7Q9NQZ5 370 aa18.16■□□□□ 0.5
CSNK1D-223ENST00000584472 ATP11BQ9Y2G3 1177 aa18.16■□□□□ 0.5
CSNK1D-223ENST00000584472 F13A1P00488 732 aa18.15■□□□□ 0.5
CSNK1D-223ENST00000584472 UBA1P22314 1058 aaKnown RBP18.15■□□□□ 0.5
CSNK1D-223ENST00000584472 TRIM60Q495X7 471 aa18.15■□□□□ 0.5
CSNK1D-223ENST00000584472 TBCKQ8TEA7 893 aa18.15■□□□□ 0.5
CSNK1D-223ENST00000584472 CRYGNQ8WXF5 182 aa18.15■□□□□ 0.5
CSNK1D-223ENST00000584472 SENP7Q9BQF6 1050 aa18.15■□□□□ 0.5
CSNK1D-223ENST00000584472 SEZ6LQ9BYH1 1024 aa18.15■□□□□ 0.5
CSNK1D-223ENST00000584472 ZSCAN16Q9H4T2 348 aaPredicted RBP18.15■□□□□ 0.5
CSNK1D-223ENST00000584472 PDLIM7Q9NR12 457 aa18.15■□□□□ 0.5
CSNK1D-223ENST00000584472 RTEL1Q9NZ71 1219 aa18.15■□□□□ 0.5
CSNK1D-223ENST00000584472 UBIAD1Q9Y5Z9 338 aa18.15■□□□□ 0.5
CSNK1D-223ENST00000584472 MROH7Q68CQ1 1323 aa18.15■□□□□ 0.5
CSNK1D-223ENST00000584472 MAFGO15525 162 aa18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 EDIL3O43854 480 aa18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 ITGB5P18084 799 aa18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 ARHGAP4P98171 946 aa18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 SP2Q02086 613 aa18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 SEMA3FQ13275 785 aa18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 INF2Q27J81 1249 aa18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 CELF3Q5SZQ8 465 aaKnown RBP18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 FOXD4L5Q5VV16 416 aaPredicted RBP18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 MYSM1Q5VVJ2 828 aa18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 CXCL17Q6UXB2 119 aa18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 BRAPQ7Z569 592 aa18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 DHX37Q8IY37 1157 aaKnown RBP18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 PPTC7Q8NI37 304 aa18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 AFG1LQ8WV93 481 aa18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 FOXD4L4Q8WXT5 416 aaPredicted RBP18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 ZFP91Q96JP5 570 aaPredicted RBP18.14■□□□□ 0.49
CSNK1D-223ENST00000584472 A0A0U1RQG5 324 aaPredicted RBP18.13■□□□□ 0.49
CSNK1D-223ENST00000584472 SOX1O00570 391 aaPredicted RBP18.13■□□□□ 0.49
CSNK1D-223ENST00000584472 KIAA0355O15063 1070 aa18.13■□□□□ 0.49
CSNK1D-223ENST00000584472 GGPS1O95749 300 aa18.13■□□□□ 0.49
CSNK1D-223ENST00000584472 MMP3P08254 477 aa18.13■□□□□ 0.49
CSNK1D-223ENST00000584472 CYP3A4P08684 503 aa18.13■□□□□ 0.49
CSNK1D-223ENST00000584472 HOXD8P13378 290 aaPredicted RBP18.13■□□□□ 0.49
CSNK1D-223ENST00000584472 PURAQ00577 322 aaKnown RBP18.13■□□□□ 0.49
CSNK1D-223ENST00000584472 TLE2Q04725 743 aa18.13■□□□□ 0.49
CSNK1D-223ENST00000584472 MTMR1Q13613 665 aa18.13■□□□□ 0.49
CSNK1D-223ENST00000584472 NEDD9Q14511 834 aa18.13■□□□□ 0.49
CSNK1D-223ENST00000584472 CEP55Q53EZ4 464 aa18.13■□□□□ 0.49
CSNK1D-223ENST00000584472 NIPA1Q7RTP0 329 aa18.13■□□□□ 0.49
CSNK1D-223ENST00000584472 GIMAP8Q8ND71 665 aaPredicted RBP18.13■□□□□ 0.49
CSNK1D-223ENST00000584472 JADE2Q9NQC1 790 aa18.13■□□□□ 0.49
CSNK1D-223ENST00000584472 CHMP5Q9NZZ3 219 aa18.13■□□□□ 0.49
CSNK1D-223ENST00000584472 SCN10AQ9Y5Y9 1956 aa18.12■□□□□ 0.49
CSNK1D-223ENST00000584472 CLTBP09497 229 aa18.12■□□□□ 0.49
CSNK1D-223ENST00000584472 USP11P51784 963 aa18.12■□□□□ 0.49
CSNK1D-223ENST00000584472 MDM2Q00987 491 aaPredicted RBP18.12■□□□□ 0.49
CSNK1D-223ENST00000584472 DGKDQ16760 1214 aa18.12■□□□□ 0.49
CSNK1D-223ENST00000584472 METTL7BQ6UX53 244 aa18.12■□□□□ 0.49
CSNK1D-223ENST00000584472 NEK8Q86SG6 692 aa18.12■□□□□ 0.49
CSNK1D-223ENST00000584472 VTI1AQ96AJ9 217 aa18.12■□□□□ 0.49
CSNK1D-223ENST00000584472 MXRA8Q9BRK3 442 aa18.12■□□□□ 0.49
CSNK1D-223ENST00000584472 MTG1Q9BT17 334 aaPredicted RBP18.12■□□□□ 0.49
CSNK1D-223ENST00000584472 MEIS1O00470 390 aa18.11■□□□□ 0.49
CSNK1D-223ENST00000584472 MYL3P08590 195 aa18.11■□□□□ 0.49
CSNK1D-223ENST00000584472 TRAPPC10P48553 1259 aa18.11■□□□□ 0.49
CSNK1D-223ENST00000584472 CDK7P50613 346 aa18.11■□□□□ 0.49
CSNK1D-223ENST00000584472 TOB1P50616 345 aaPredicted RBP18.11■□□□□ 0.49
CSNK1D-223ENST00000584472 RILPL1Q5EBL4 403 aa18.11■□□□□ 0.49
CSNK1D-223ENST00000584472 FAM173BQ6P4H8 233 aa18.11■□□□□ 0.49
CSNK1D-223ENST00000584472 SLC43A3Q8NBI5 491 aa18.11■□□□□ 0.49
CSNK1D-223ENST00000584472 SPATA33Q96N06 139 aa18.11■□□□□ 0.49
CSNK1D-223ENST00000584472 MLXIPQ9HAP2 919 aa18.11■□□□□ 0.49
CSNK1D-223ENST00000584472 NOL7Q9UMY1 257 aaKnown RBP18.11■□□□□ 0.49
CSNK1D-223ENST00000584472 TCHHQ07283 1943 aa18.1■□□□□ 0.49
CSNK1D-223ENST00000584472 DCDC2CA8MYV0 355 aa18.1■□□□□ 0.49
CSNK1D-223ENST00000584472 ARVCFO00192 962 aa18.1■□□□□ 0.49
CSNK1D-223ENST00000584472 WNT7AO00755 349 aa18.1■□□□□ 0.49
CSNK1D-223ENST00000584472 PPFIA4O75335 1185 aa18.1■□□□□ 0.49
CSNK1D-223ENST00000584472 KCNA2P16389 499 aa18.1■□□□□ 0.49
CSNK1D-223ENST00000584472 CIITAP33076 1130 aa18.1■□□□□ 0.49
CSNK1D-223ENST00000584472 ITGA7Q13683 1181 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms