RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 RFC2P35250 354 aa11.34□□□□□ -0.59
SKA2-208ENST00000583927 PSEN2P49810 448 aa11.34□□□□□ -0.59
SKA2-208ENST00000583927 PKN1Q16512 942 aa11.34□□□□□ -0.59
SKA2-208ENST00000583927 C16orf59Q7L2K0 433 aa11.34□□□□□ -0.59
SKA2-208ENST00000583927 RPUSD2Q8IZ73 545 aaKnown RBP11.34□□□□□ -0.59
SKA2-208ENST00000583927 CAGE1Q8TC20 777 aa11.34□□□□□ -0.59
SKA2-208ENST00000583927 CTAGE1Q96RT6 745 aa11.34□□□□□ -0.59
SKA2-208ENST00000583927 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.34□□□□□ -0.59
SKA2-208ENST00000583927 C16orf70Q9BSU1 422 aa11.34□□□□□ -0.59
SKA2-208ENST00000583927 MLXIPQ9HAP2 919 aa11.34□□□□□ -0.59
SKA2-208ENST00000583927 TRMT13Q9NUP7 481 aaKnown RBP11.34□□□□□ -0.59
SKA2-208ENST00000583927 EVPLQ92817 2033 aa11.34□□□□□ -0.59
SKA2-208ENST00000583927 KCNA2P16389 499 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 ITGB5P18084 799 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 SREBF1P36956 1147 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 ADCY7P51828 1080 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 BFSP2Q13515 415 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 MFSD10Q14728 455 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 UBE2SQ16763 222 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 KIAA0753Q2KHM9 967 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 FAM47CQ5HY64 1035 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 CYFIP1Q7L576 1253 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 NIPA1Q7RTP0 329 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 CCDC155Q8N6L0 562 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 CRYGNQ8WXF5 182 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 HERVK_113Q902F9 699 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 VWCEQ96DN2 955 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 RNPC3Q96LT9 517 aaKnown RBP11.33□□□□□ -0.6
SKA2-208ENST00000583927 GPR20Q99678 358 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 PPP1R12CQ9BZL4 782 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 WNT8AQ9H1J5 351 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 JADE2Q9NQC1 790 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 SH3GLB2Q9NR46 395 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 RTEL1Q9NZ71 1219 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 UMODL1Q5DID0 1318 aa11.33□□□□□ -0.6
SKA2-208ENST00000583927 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.32□□□□□ -0.6
SKA2-208ENST00000583927 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.32□□□□□ -0.6
SKA2-208ENST00000583927 H3BRB1 525 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 NOP56O00567 594 aaKnown RBP11.32□□□□□ -0.6
SKA2-208ENST00000583927 LGALS2P05162 132 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 CYP3A4P08684 503 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 GNA11P29992 359 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 MTMR1Q13613 665 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 PTGISQ16647 500 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 CEP55Q53EZ4 464 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 GDF6Q6KF10 455 aaPredicted RBP11.32□□□□□ -0.6
SKA2-208ENST00000583927 ZNF365Q70YC5 407 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 C7orf31Q8N865 590 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 BICD2Q8TD16 824 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 AFAP1L1Q8TED9 768 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 MXRA8Q9BRK3 442 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 ANO3Q9BYT9 981 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 MTIF3Q9H2K0 278 aaKnown RBP11.32□□□□□ -0.6
SKA2-208ENST00000583927 TUT1Q9H6E5 874 aaKnown RBP11.32□□□□□ -0.6
SKA2-208ENST00000583927 MTMR10Q9NXD2 777 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 HDAC6Q9UBN7 1215 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 NAP1L2Q9ULW6 460 aaPredicted RBP11.32□□□□□ -0.6
SKA2-208ENST00000583927 SIP14410 1827 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 NFASCO94856 1347 aa11.32□□□□□ -0.6
SKA2-208ENST00000583927 MEIS1O00470 390 aa11.31□□□□□ -0.6
SKA2-208ENST00000583927 FGBP02675 491 aa11.31□□□□□ -0.6
SKA2-208ENST00000583927 IQCF3P0C7M6 154 aa11.31□□□□□ -0.6
SKA2-208ENST00000583927 ZNF286BP0CG31 522 aa11.31□□□□□ -0.6
SKA2-208ENST00000583927 CYP2C9P11712 490 aa11.31□□□□□ -0.6
SKA2-208ENST00000583927 AKAP17AQ02040 695 aaKnown RBP11.31□□□□□ -0.6
SKA2-208ENST00000583927 PTK7Q13308 1070 aa11.31□□□□□ -0.6
SKA2-208ENST00000583927 DEFB123Q8N688 67 aa11.31□□□□□ -0.6
SKA2-208ENST00000583927 CCDC148Q8NFR7 591 aa11.31□□□□□ -0.6
SKA2-208ENST00000583927 ZFP91Q96JP5 570 aaPredicted RBP11.31□□□□□ -0.6
SKA2-208ENST00000583927 UPF3BQ9BZI7 483 aaKnown RBP11.31□□□□□ -0.6
SKA2-208ENST00000583927 BCAS3Q9H6U6 928 aa11.31□□□□□ -0.6
SKA2-208ENST00000583927 C6orf50Q9HD87 102 aa11.31□□□□□ -0.6
SKA2-208ENST00000583927 KCNH7Q9NS40 1196 aa11.31□□□□□ -0.6
SKA2-208ENST00000583927 ZNF215Q9UL58 517 aaPredicted RBP11.31□□□□□ -0.6
SKA2-208ENST00000583927 NOD1Q9Y239 953 aa11.31□□□□□ -0.6
SKA2-208ENST00000583927 REV3LO60673 3130 aa11.31□□□□□ -0.6
SKA2-208ENST00000583927 ATP9AO75110 1047 aa11.3□□□□□ -0.6
SKA2-208ENST00000583927 CAND2O75155 1236 aa11.3□□□□□ -0.6
SKA2-208ENST00000583927 CCL23P55773 120 aa11.3□□□□□ -0.6
SKA2-208ENST00000583927 ADAM17P78536 824 aa11.3□□□□□ -0.6
SKA2-208ENST00000583927 ANKRD1Q15327 319 aa11.3□□□□□ -0.6
SKA2-208ENST00000583927 CPLX2Q6PUV4 134 aaKnown RBP11.3□□□□□ -0.6
SKA2-208ENST00000583927 SERINC5Q86VE9 423 aa11.3□□□□□ -0.6
SKA2-208ENST00000583927 TRIM22Q8IYM9 498 aa11.3□□□□□ -0.6
SKA2-208ENST00000583927 REXO1Q8N1G1 1221 aaKnown RBP11.3□□□□□ -0.6
SKA2-208ENST00000583927 RETREG2Q8NC44 543 aa11.3□□□□□ -0.6
SKA2-208ENST00000583927 SEPT1Q8WYJ6 367 aa11.3□□□□□ -0.6
SKA2-208ENST00000583927 DHX38Q92620 1227 aaKnown RBP11.3□□□□□ -0.6
SKA2-208ENST00000583927 PHKBQ93100 1093 aa11.3□□□□□ -0.6
SKA2-208ENST00000583927 PDRG1Q9NUG6 133 aa11.3□□□□□ -0.6
SKA2-208ENST00000583927 EMSYQ7Z589 1322 aa11.3□□□□□ -0.6
SKA2-208ENST00000583927 GSTTP1A0A1W2PQM5 241 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 LGR5O75473 907 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 DEXIO95424 95 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 CXCL10P02778 98 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 ACRP10323 421 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 GNAT1P11488 350 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 CKBP12277 381 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 SELPP16109 830 aa11.29□□□□□ -0.6
SKA2-208ENST00000583927 CIITAP33076 1130 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms