RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 ATP11AP98196 1134 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 GPATCH4Q5T3I0 446 aaKnown RBP13.12□□□□□ -0.31
ERBB2-206ENST00000578373 UBE2TQ9NPD8 197 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-206ENST00000578373 ZNF148Q9UQR1 794 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 LEMD3Q9Y2U8 911 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 SNX24Q9Y343 169 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 POTEFA5A3E0 1075 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 USP17L10C9JJH3 530 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 POTEIP0CG38 1075 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 FAM133BQ5BKY9 247 aaKnown RBP13.12□□□□□ -0.31
ERBB2-206ENST00000578373 FAM83BQ5T0W9 1011 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 POTEEQ6S8J3 1075 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 LRRC1Q9BTT6 524 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 TMEM60Q9H2L4 133 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 SH2D4AQ9H788 454 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 EXOC7Q9UPT5 735 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 A0A1B0GUA9 196 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 STAMBPO95630 424 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 GYPCP04921 128 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 MYL7Q01449 175 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 NR1I3Q14994 352 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 CASC4Q6P4E1 433 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 FMNL3Q8IVF7 1028 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 CHURC1Q8WUH1 139 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 POMGNT1Q8WZA1 660 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 CEP63Q96MT8 703 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 JPH2Q9BR39 696 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-206ENST00000578373 GOLPH3Q9H4A6 298 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 EIF3CLB5ME19 914 aaKnown RBP13.11□□□□□ -0.31
ERBB2-206ENST00000578373 ATP2A2P16615 1042 aaKnown RBP13.11□□□□□ -0.31
ERBB2-206ENST00000578373 ZNF653Q96CK0 615 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 EIF3CQ99613 913 aaKnown RBP13.11□□□□□ -0.31
ERBB2-206ENST00000578373 MAGEF1Q9HAY2 307 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 HOMER3Q9NSC5 361 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 EHD2Q9NZN4 543 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 ANKFY1Q9P2R3 1169 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 NEXMIFQ5QGS0 1516 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 NCAPD2Q15021 1401 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 ADGRB1O14514 1584 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 SERPING1P05155 500 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 ZNF746Q6NUN9 644 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-206ENST00000578373 CCDC13Q8IYE1 715 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 MCUR1Q96AQ8 359 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 OSBPL9Q96SU4 736 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 CEMIPQ8WUJ3 1361 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 HNRNPDLO14979 420 aaKnown RBP13.11□□□□□ -0.31
ERBB2-206ENST00000578373 ATP5DP30049 168 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 TRIM28Q13263 835 aaKnown RBP13.11□□□□□ -0.31
ERBB2-206ENST00000578373 SFR1Q86XK3 245 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 REXO1L1PQ8IX06 675 aa13.11□□□□□ -0.31
ERBB2-206ENST00000578373 STMN2Q93045 179 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 ZNF577Q9BSK1 485 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 PLAAQ9Y263 795 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 FAM169AQ9Y6X4 670 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 LRRIQ4A6NIV6 560 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 ACSL3O95573 720 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
ERBB2-206ENST00000578373 PSMC2P35998 433 aaKnown RBP13.1□□□□□ -0.31
ERBB2-206ENST00000578373 USP14P54578 494 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 KCNH2Q12809 1159 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 CDC37Q16543 378 aaPredicted RBP13.1□□□□□ -0.31
ERBB2-206ENST00000578373 ANO3Q9BYT9 981 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 CCPG1Q9ULG6 757 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 IQGAP1P46940 1657 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 GRM1Q13255 1194 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 TTBK2Q6IQ55 1244 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 UNC13DQ70J99 1090 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 HOOK2Q96ED9 719 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 TSNARE1Q96NA8 513 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 DUSP10Q9Y6W6 482 aa13.1□□□□□ -0.31
ERBB2-206ENST00000578373 NPHP3-ACAD11A0A0J9YXS1 232 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 MYO1FO00160 1098 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 PTPAQ15257 358 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 HIBCHQ6NVY1 386 aaPredicted RBP13.09□□□□□ -0.31
ERBB2-206ENST00000578373 SCYL2Q6P3W7 929 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 FOXP4Q8IVH2 680 aaPredicted RBP13.09□□□□□ -0.31
ERBB2-206ENST00000578373 VPS52Q8N1B4 723 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 GLG1Q92896 1179 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 CCDC89Q8N998 374 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 SPATA4Q8NEY3 305 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 GDAP1Q8TB36 358 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 MPHOSPH6Q99547 160 aaKnown RBP13.09□□□□□ -0.31
ERBB2-206ENST00000578373 LIMA1Q9UHB6 759 aaKnown RBP13.09□□□□□ -0.31
ERBB2-206ENST00000578373 TTLL3Q9Y4R7 772 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 WDR19Q8NEZ3 1342 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 A0A087WUV0 522 aaPredicted RBP13.09□□□□□ -0.31
ERBB2-206ENST00000578373 DCAF8L1A6NGE4 600 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 RAD17O75943 681 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 TRIM37O94972 964 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 APBA3O96018 575 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 FERP16591 822 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 PEX19P40855 299 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 LIG4P49917 911 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 DPYDQ12882 1025 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 NEDD9Q14511 834 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 KCNB2Q92953 911 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 TRIM9Q9C026 710 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 KLHL14Q9P2G3 628 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 NOP56O00567 594 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms