RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 ADGRL3Q9HAR2 1447 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 FTCDO95954 541 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 PPM1FP49593 454 aaPredicted RBP11.6□□□□□ -0.55
SEC22B-201ENST00000578049 LEMD3Q9Y2U8 911 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 MBD5Q9P267 1494 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 DDX39AO00148 427 aaKnown RBP11.6□□□□□ -0.55
SEC22B-201ENST00000578049 DTNBO60941 627 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 RFX1P22670 979 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 PHKA1P46020 1223 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 YARSP54577 528 aaKnown RBP11.6□□□□□ -0.55
SEC22B-201ENST00000578049 SLFN13Q68D06 897 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 CMTR1Q8N1G2 835 aaKnown RBP11.6□□□□□ -0.55
SEC22B-201ENST00000578049 CACYBPQ9HB71 228 aaKnown RBP11.6□□□□□ -0.55
SEC22B-201ENST00000578049 NRBP2Q9NSY0 501 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 GCNT4Q9P109 453 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 PDCLQ13371 301 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 GPIHBP1Q8IV16 184 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 PITPNM3Q9BZ71 974 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 USP40Q9NVE5 1235 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 A6NJR5 290 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 SPECC1L-ADORA2AF8WAN1 911 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 IL6STP40189 918 aaPredicted RBP11.6□□□□□ -0.55
SEC22B-201ENST00000578049 PPP2R2AP63151 447 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 PRPSAP1Q14558 356 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 TMED2Q15363 201 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 SURF1Q15526 300 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 JADE1Q6IE81 842 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 FAM133AQ8N9E0 248 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 TTC13Q8NBP0 860 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 WDR46O15213 610 aaKnown RBP11.6□□□□□ -0.55
SEC22B-201ENST00000578049 XPOTO43592 962 aaKnown RBP11.6□□□□□ -0.55
SEC22B-201ENST00000578049 CYP2C19P33261 490 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 MXI1P50539 228 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 PTPN12Q05209 780 aaKnown RBP11.6□□□□□ -0.55
SEC22B-201ENST00000578049 PPP2R5DQ14738 602 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 ADAT2Q7Z6V5 191 aaKnown RBP11.6□□□□□ -0.55
SEC22B-201ENST00000578049 PRPF31Q8WWY3 499 aaKnown RBP11.6□□□□□ -0.55
SEC22B-201ENST00000578049 AS3MTQ9HBK9 375 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 MAD1L1Q9Y6D9 718 aa11.6□□□□□ -0.55
SEC22B-201ENST00000578049 SGK1O00141 431 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 CPP00450 1065 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 GSTA1P08263 222 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 GSTA2P09210 222 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 ICA1Q05084 483 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 SF3A3Q12874 501 aaKnown RBP eCLIP11.59□□□□□ -0.55
SEC22B-201ENST00000578049 SYT2Q8N9I0 419 aaPredicted RBP11.59□□□□□ -0.55
SEC22B-201ENST00000578049 GFM2Q969S9 779 aaKnown RBP11.59□□□□□ -0.55
SEC22B-201ENST00000578049 PGBD1Q96JS3 809 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 CYP27A1Q02318 531 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 TEDDM1Q5T9Z0 273 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 KRT80Q6KB66 452 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 WDR75Q8IWA0 830 aaKnown RBP11.59□□□□□ -0.55
SEC22B-201ENST00000578049 ATP6V1G3Q96LB4 118 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 UPF3AQ9H1J1 476 aaKnown RBP11.59□□□□□ -0.55
SEC22B-201ENST00000578049 TTC36A6NLP5 189 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 PHEXP78562 749 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 E2F4Q16254 413 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 FAM133BQ5BKY9 247 aaKnown RBP11.59□□□□□ -0.55
SEC22B-201ENST00000578049 RAB44Q7Z6P3 723 aaPredicted RBP11.59□□□□□ -0.55
SEC22B-201ENST00000578049 CCDC127Q96BQ5 260 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 CDHR1Q96JP9 859 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 FTOQ9C0B1 505 aaKnown RBP eCLIP11.59□□□□□ -0.55
SEC22B-201ENST00000578049 SENP1Q9P0U3 644 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 GGPS1O95749 300 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 CHRNDQ07001 517 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 NR5A1Q13285 461 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 BSPRYQ5W0U4 402 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 POMGNT1Q8WZA1 660 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 ANKRD7Q92527 254 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 OSBP2Q969R2 916 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 OLFM3Q96PB7 478 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 MED7O43513 233 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 MYCNP04198 464 aaPredicted RBP11.59□□□□□ -0.55
SEC22B-201ENST00000578049 CYP4F22Q6NT55 531 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 BZW1Q7L1Q6 419 aaKnown RBP11.59□□□□□ -0.55
SEC22B-201ENST00000578049 SMYD4Q8IYR2 804 aaPredicted RBP11.59□□□□□ -0.55
SEC22B-201ENST00000578049 TBCKQ8TEA7 893 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 SCYL1Q96KG9 808 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 BRIP1Q9BX63 1249 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 BTG4Q9NY30 223 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 TLR7Q9NYK1 1049 aaKnown RBP11.59□□□□□ -0.55
SEC22B-201ENST00000578049 PCDHB6Q9Y5E3 794 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 IVNS1ABPQ9Y6Y0 642 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 PFASO15067 1338 aa11.59□□□□□ -0.55
SEC22B-201ENST00000578049 SPAG7O75391 227 aa11.58□□□□□ -0.55
SEC22B-201ENST00000578049 PYGBP11216 843 aa11.58□□□□□ -0.55
SEC22B-201ENST00000578049 GOLGA8FQ08AF8 430 aa11.58□□□□□ -0.55
SEC22B-201ENST00000578049 GOLGA8DPQ0D2H9 430 aa11.58□□□□□ -0.55
SEC22B-201ENST00000578049 TOB2Q14106 344 aaPredicted RBP11.58□□□□□ -0.55
SEC22B-201ENST00000578049 TBC1D1Q86TI0 1168 aaPredicted RBP11.58□□□□□ -0.55
SEC22B-201ENST00000578049 PARVGQ9HBI0 331 aa11.58□□□□□ -0.55
SEC22B-201ENST00000578049 HNRNPDLO14979 420 aaKnown RBP11.58□□□□□ -0.56
SEC22B-201ENST00000578049 PLCG1P19174 1290 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 CHRNA3P32297 505 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 BCAMP50895 628 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 RCN2Q14257 317 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 PDZD8Q8NEN9 1154 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 RBM41Q96IZ5 413 aaKnown RBP11.58□□□□□ -0.56
SEC22B-201ENST00000578049 KCNQ3O43525 872 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 ZNF189O75820 626 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms