RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 PCDHA8Q9Y5H6 950 aa13.67□□□□□ -0.22
LITAF-219ENST00000576334 GTF3C3Q9Y5Q9 886 aa13.67□□□□□ -0.22
LITAF-219ENST00000576334 STXBP3O00186 592 aa13.66□□□□□ -0.22
LITAF-219ENST00000576334 PITPNM1O00562 1244 aa13.66□□□□□ -0.22
LITAF-219ENST00000576334 FIBPO43427 364 aa13.66□□□□□ -0.22
LITAF-219ENST00000576334 CKBP12277 381 aa13.66□□□□□ -0.22
LITAF-219ENST00000576334 NAPAP54920 295 aa13.66□□□□□ -0.22
LITAF-219ENST00000576334 KRT32Q14532 448 aa13.66□□□□□ -0.22
LITAF-219ENST00000576334 TRIM71Q2Q1W2 868 aaKnown RBP13.66□□□□□ -0.22
LITAF-219ENST00000576334 GNPTABQ3T906 1256 aa13.66□□□□□ -0.22
LITAF-219ENST00000576334 UTP14CQ5TAP6 766 aaKnown RBP13.66□□□□□ -0.22
LITAF-219ENST00000576334 TRAF7Q6Q0C0 670 aa13.66□□□□□ -0.22
LITAF-219ENST00000576334 RPUSD2Q8IZ73 545 aaKnown RBP13.66□□□□□ -0.22
LITAF-219ENST00000576334 OSBPL7Q9BZF2 842 aa13.66□□□□□ -0.22
LITAF-219ENST00000576334 FTOQ9C0B1 505 aaKnown RBP eCLIP13.66□□□□□ -0.22
LITAF-219ENST00000576334 RBM28Q9NW13 759 aaKnown RBP13.66□□□□□ -0.22
LITAF-219ENST00000576334 SLC4A7Q9Y6M7 1214 aa13.66□□□□□ -0.22
LITAF-219ENST00000576334 MYO9BQ13459 2157 aa13.66□□□□□ -0.22
LITAF-219ENST00000576334 H3BRB1 525 aa13.65□□□□□ -0.22
LITAF-219ENST00000576334 NOP56O00567 594 aaKnown RBP13.65□□□□□ -0.22
LITAF-219ENST00000576334 NBNO60934 754 aa13.65□□□□□ -0.22
LITAF-219ENST00000576334 ARHGEF15O94989 841 aa13.65□□□□□ -0.22
LITAF-219ENST00000576334 NEFLP07196 543 aa13.65□□□□□ -0.22
LITAF-219ENST00000576334 SMIM10L2AP0DMW4 78 aa13.65□□□□□ -0.22
LITAF-219ENST00000576334 SMIM10L2BP0DMW5 78 aa13.65□□□□□ -0.22
LITAF-219ENST00000576334 RPS6KB1P23443 525 aa13.65□□□□□ -0.22
LITAF-219ENST00000576334 FGD1P98174 961 aa13.65□□□□□ -0.22
LITAF-219ENST00000576334 BFSP2Q13515 415 aa13.65□□□□□ -0.22
LITAF-219ENST00000576334 MBTPS1Q14703 1052 aa13.65□□□□□ -0.22
LITAF-219ENST00000576334 ZNF618Q5T7W0 954 aa13.65□□□□□ -0.22
LITAF-219ENST00000576334 METTL7BQ6UX53 244 aa13.65□□□□□ -0.22
LITAF-219ENST00000576334 UIMC1Q96RL1 719 aa13.65□□□□□ -0.22
LITAF-219ENST00000576334 KATNAL1Q9BW62 490 aa13.65□□□□□ -0.22
LITAF-219ENST00000576334 PRDM12Q9H4Q4 367 aa13.65□□□□□ -0.22
LITAF-219ENST00000576334 TUT1Q9H6E5 874 aaKnown RBP13.65□□□□□ -0.22
LITAF-219ENST00000576334 UBIAD1Q9Y5Z9 338 aa13.65□□□□□ -0.22
LITAF-219ENST00000576334 TREHO43280 583 aa13.64□□□□□ -0.23
LITAF-219ENST00000576334 DTNBO60941 627 aa13.64□□□□□ -0.23
LITAF-219ENST00000576334 STAM2O75886 525 aa13.64□□□□□ -0.23
LITAF-219ENST00000576334 FOSL2P15408 326 aa13.64□□□□□ -0.23
LITAF-219ENST00000576334 SELPP16109 830 aa13.64□□□□□ -0.23
LITAF-219ENST00000576334 KCNA2P16389 499 aa13.64□□□□□ -0.23
LITAF-219ENST00000576334 ATP2A2P16615 1042 aaKnown RBP13.64□□□□□ -0.23
LITAF-219ENST00000576334 METAP2P50579 478 aaKnown RBP eCLIP13.64□□□□□ -0.23
LITAF-219ENST00000576334 NEDD9Q14511 834 aa13.64□□□□□ -0.23
LITAF-219ENST00000576334 BLOC1S2Q6QNY1 142 aa13.64□□□□□ -0.23
LITAF-219ENST00000576334 LRRC8DQ7L1W4 858 aa13.64□□□□□ -0.23
LITAF-219ENST00000576334 SPRED2Q7Z698 418 aa13.64□□□□□ -0.23
LITAF-219ENST00000576334 USP38Q8NB14 1042 aa13.64□□□□□ -0.23
LITAF-219ENST00000576334 MAFAQ8NHW3 353 aaPredicted RBP13.64□□□□□ -0.23
LITAF-219ENST00000576334 PHKBQ93100 1093 aa13.64□□□□□ -0.23
LITAF-219ENST00000576334 RNPEPQ9H4A4 650 aa13.64□□□□□ -0.23
LITAF-219ENST00000576334 NCOA5Q9HCD5 579 aaKnown RBP13.64□□□□□ -0.23
LITAF-219ENST00000576334 RIC8AQ9NPQ8 531 aa13.64□□□□□ -0.23
LITAF-219ENST00000576334 SETD4Q9NVD3 440 aa13.64□□□□□ -0.23
LITAF-219ENST00000576334 TRANK1O15050 2925 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 GSTTP1A0A1W2PQM5 241 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 SMCO2A6NFE2 343 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 SPDYE3A6NKU9 549 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 HMGB1P09429 215 aaKnown RBP13.63□□□□□ -0.23
LITAF-219ENST00000576334 ARP10275 920 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 TCF7P36402 384 aaPredicted RBP13.63□□□□□ -0.23
LITAF-219ENST00000576334 CCT2P78371 535 aaKnown RBP13.63□□□□□ -0.23
LITAF-219ENST00000576334 PTK7Q13308 1070 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 ADGRE1Q14246 886 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 PKN1Q16512 942 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 NLRX1Q86UT6 975 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 CAGE1Q8TC20 777 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 AFAP1L1Q8TED9 768 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 ATP6V0A1Q93050 837 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 ZBTB10Q96DT7 871 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 USP26Q9BXU7 913 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 MTIF3Q9H2K0 278 aaKnown RBP13.63□□□□□ -0.23
LITAF-219ENST00000576334 CERS4Q9HA82 394 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 BARHL2Q9NY43 387 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 MSRAQ9UJ68 235 aa13.63□□□□□ -0.23
LITAF-219ENST00000576334 TMEM265A0A087WTH1 108 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 RFXAPO00287 272 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 PFKMP08237 780 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 CTSHP09668 335 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 MARK3P27448 753 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 RFC2P35250 354 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 THPOP40225 353 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 ADCY7P51828 1080 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 DEFB103AP81534 67 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 RBL2Q08999 1139 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 MTMR1Q13613 665 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 TOB2Q14106 344 aaPredicted RBP13.62□□□□□ -0.23
LITAF-219ENST00000576334 JAKMIP3Q5VZ66 844 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 XRRA1Q6P2D8 792 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 SERINC5Q86VE9 423 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 CCDC155Q8N6L0 562 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 PPM1EQ8WY54 764 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 GPRASP2Q96D09 838 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 SENP7Q9BQF6 1050 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 ANO3Q9BYT9 981 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 AGXT2Q9BYV1 514 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 UPF3BQ9BZI7 483 aaKnown RBP13.62□□□□□ -0.23
LITAF-219ENST00000576334 JADE2Q9NQC1 790 aa13.62□□□□□ -0.23
LITAF-219ENST00000576334 PRDM6Q9NQX0 595 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms