RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 BCAR3O75815 825 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 LRIG2O94898 1065 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 CPP00450 1065 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 MYL1P05976 194 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 GOLGA6DP0CG33 693 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 ADH5P11766 374 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 KCNJ6P48051 423 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 SCNN1BP51168 640 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 GFRA1P56159 465 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 LRRC41Q15345 812 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 NBPF9Q3BBW0 867 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 MAP9Q49MG5 647 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 CHSY3Q70JA7 882 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 DMRTC2Q8IXT2 367 aaPredicted RBP8.68□□□□□ -1.02
CNOT1-222ENST00000570139 PI4K2BQ8TCG2 481 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 UBASH3BQ8TF42 649 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 ZNF526Q8TF50 670 aaPredicted RBP8.68□□□□□ -1.02
CNOT1-222ENST00000570139 SSH1Q8WYL5 1049 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 ISL2Q96A47 359 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 ASPNQ9BXN1 380 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 RNF208Q9H0X6 261 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 GOLGA6AQ9NYA3 693 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 PRR13Q9NZ81 148 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 DIS3Q9Y2L1 958 aaKnown RBP8.68□□□□□ -1.02
CNOT1-222ENST00000570139 FHOD1Q9Y613 1164 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 PTPRCP08575 1304 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 TCRBV16S1A1N1A0A5B0 115 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 PXDNLA1KZ92 1463 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 BTBD11A6QL63 1104 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 ERVV-2B6SEH9 535 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 SHOXO15266 292 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 SNRPB2P08579 225 aaKnown RBP8.67□□□□□ -1.02
CNOT1-222ENST00000570139 TMPRSS15P98073 1019 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 SART3Q15020 963 aaKnown RBP8.67□□□□□ -1.02
CNOT1-222ENST00000570139 SEPT7Q16181 437 aaKnown RBP8.67□□□□□ -1.02
CNOT1-222ENST00000570139 SPATA31A1Q5TZJ5 1347 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 CCDC30Q5VVM6 783 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 GTF2IRD2BQ6EKJ0 949 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 ATF7IPQ6VMQ6 1270 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 GTF2IRD2Q86UP8 949 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 KIF18BQ86Y91 864 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 FTSJ3Q8IY81 847 aaKnown RBP8.67□□□□□ -1.02
CNOT1-222ENST00000570139 SMG8Q8ND04 991 aaKnown RBP8.67□□□□□ -1.02
CNOT1-222ENST00000570139 SYTL5Q8TDW5 730 aaPredicted RBP8.67□□□□□ -1.02
CNOT1-222ENST00000570139 SCLYQ96I15 445 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 KREMEN1Q96MU8 473 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 STK31Q9BXU1 1019 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 API5Q9BZZ5 524 aaKnown RBP8.67□□□□□ -1.02
CNOT1-222ENST00000570139 MTFR1LQ9H019 292 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 NKX2-4Q9H2Z4 354 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 FBXL21Q9UKT6 434 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 CEP131Q9UPN4 1083 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 COMMD10Q9Y6G5 202 aa8.67□□□□□ -1.02
CNOT1-222ENST00000570139 TOGARAM1Q9Y4F4 1720 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 SPATA31A5Q5VU36 1347 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 SPATA31A7Q8IWB4 1347 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 CYP27B1O15528 508 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 ADAMTS2O95450 1211 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 BPIP17213 487 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 SYDE2Q5VT97 1194 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 CDCA2Q69YH5 1023 aaPredicted RBP8.66□□□□□ -1.02
CNOT1-222ENST00000570139 NXNQ6DKJ4 435 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 C8orf86Q6ZUL3 223 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 LHFPL2Q6ZUX7 228 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 ARMCX6Q7L4S7 300 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 UNC5CLQ8IV45 518 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.66□□□□□ -1.02
CNOT1-222ENST00000570139 TCEAL8Q8IYN2 117 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 DZIP1LQ8IYY4 767 aaKnown RBP8.66□□□□□ -1.02
CNOT1-222ENST00000570139 C8orf58Q8NAV2 365 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 XAGE3Q8WTP9 111 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 PPP1R13LQ8WUF5 828 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 FRAT1Q92837 279 aaPredicted RBP8.66□□□□□ -1.02
CNOT1-222ENST00000570139 HOOK2Q96ED9 719 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 WNK4Q96J92 1243 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 ORAI3Q9BRQ5 295 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 KCNK4Q9NYG8 393 aa8.66□□□□□ -1.02
CNOT1-222ENST00000570139 HEG1Q9ULI3 1381 aa8.65□□□□□ -1.02
CNOT1-222ENST00000570139 SCG5P05408 212 aa8.65□□□□□ -1.02
CNOT1-222ENST00000570139 PYGMP11217 842 aa8.65□□□□□ -1.02
CNOT1-222ENST00000570139 ETV3P41162 512 aa8.65□□□□□ -1.02
CNOT1-222ENST00000570139 ZNF445P59923 1031 aa8.65□□□□□ -1.02
CNOT1-222ENST00000570139 IRX6P78412 446 aaPredicted RBP8.65□□□□□ -1.02
CNOT1-222ENST00000570139 SRSF11Q05519 484 aaKnown RBP8.65□□□□□ -1.02
CNOT1-222ENST00000570139 SOX4Q06945 474 aaPredicted RBP8.65□□□□□ -1.02
CNOT1-222ENST00000570139 VPS72Q15906 364 aa8.65□□□□□ -1.02
CNOT1-222ENST00000570139 PIK3R6Q5UE93 754 aa8.65□□□□□ -1.02
CNOT1-222ENST00000570139 STYK1Q6J9G0 422 aa8.65□□□□□ -1.02
CNOT1-222ENST00000570139 ZCCHC8Q6NZY4 707 aaKnown RBP8.65□□□□□ -1.02
CNOT1-222ENST00000570139 DYMQ7RTS9 669 aa8.65□□□□□ -1.02
CNOT1-222ENST00000570139 DDX53Q86TM3 631 aaKnown RBP8.65□□□□□ -1.02
CNOT1-222ENST00000570139 SMYD4Q8IYR2 804 aaPredicted RBP8.65□□□□□ -1.02
CNOT1-222ENST00000570139 TTC5Q8N0Z6 440 aa8.65□□□□□ -1.02
CNOT1-222ENST00000570139 CNTD1Q8N815 330 aa8.65□□□□□ -1.02
CNOT1-222ENST00000570139 YIPF4Q9BSR8 244 aa8.65□□□□□ -1.02
CNOT1-222ENST00000570139 NOL6Q9H6R4 1146 aaKnown RBP8.65□□□□□ -1.02
CNOT1-222ENST00000570139 LGR6Q9HBX8 967 aa8.65□□□□□ -1.02
CNOT1-222ENST00000570139 ARNT2Q9HBZ2 717 aa8.65□□□□□ -1.02
CNOT1-222ENST00000570139 TRHDEQ9UKU6 1024 aa8.65□□□□□ -1.02
CNOT1-222ENST00000570139 DDX19BQ9UMR2 479 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms