RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	TRIM10	Q9UDY6	481 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	SRGAP2	O75044	1071 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	IPO7	O95373	1038 aa	Known RBP	13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	ATP1A1	P05023	1023 aa	Known RBP	13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	GCFC2	P16383	781 aa	Known RBP	13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	SLC16A2	P36021	539 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	CCT6A	P40227	531 aa	Known RBP	13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	CUL4B	Q13620	913 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	TRIM14	Q14142	442 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	R3HDM1	Q15032	1099 aa	Known RBP	13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	CAGE1	Q8TC20	777 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	FAM151A	Q8WW52	585 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	COA7	Q96BR5	231 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	ZBED3	Q96IU2	234 aa	Predicted RBP	13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	HAUS4	Q9H6D7	363 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	HERC5	Q9UII4	1024 aa	Known RBP	13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	FAM184B	Q9ULE4	1060 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	PNMA6F	A0A0J9YX94	578 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	TMCO5B	A8MYB1	307 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	NDUFAB1	O14561	156 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	CD44	P16070	742 aa	Known RBP	13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	REXO1	Q8N1G1	1221 aa	Known RBP	13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	DCAF4	Q8WV16	495 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	TATDN2	Q93075	761 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	SH3GL2	Q99962	352 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	USP17L10	C9JJH3	530 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	N4BP3	O15049	544 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	FSBP	O95073	299 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	NDUFA10	O95299	355 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	GH2	P01242	217 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	RDX	P35241	583 aa	Known RBP	13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	KRT9	P35527	623 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	ADCY2	Q08462	1091 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	CRYM	Q14894	314 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	NONO	Q15233	471 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	FKBP1C	Q5VVH2	108 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	PAPD7	Q5XG87	772 aa	Known RBP	13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	CCDC70	Q6NSX1	233 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	PPP1R18	Q6NYC8	613 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	SPATS2	Q86XZ4	545 aa	Known RBP	13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	TMEM60	Q9H2L4	133 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	ETAA1	Q9NY74	926 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	MCM8	Q9UJA3	840 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.24	□□□□□ -0.29
SPG7-222	ENST00000569820	ATAD5	Q96QE3	1844 aa		13.24	□□□□□ -0.29
SPG7-222	ENST00000569820		A6NNZ2	444 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	MYO1F	O00160	1098 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	OPA1	O60313	960 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	CDC25A	P30304	524 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	FNTA	P49354	379 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	TUBB8	Q3ZCM7	444 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	SLFN13	Q68D06	897 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	TTC19	Q6DKK2	380 aa	Predicted RBP	13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	CIAPIN1	Q6FI81	312 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	CDAN1	Q8IWY9	1227 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	GMCL1P1	Q8NEA9	526 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	AEN	Q8WTP8	325 aa	Known RBP	13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	JAKMIP2	Q96AA8	810 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	NUCKS1	Q9H1E3	243 aa	Known RBP	13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	REXO2	Q9Y3B8	237 aa	Known RBP	13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	RNF225	M0QZC1	329 aa	Predicted RBP	13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	ZBTB5	O15062	677 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	ADCY7	P51828	1080 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	RBM26	Q5T8P6	1007 aa	Known RBP	13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	AP1AR	Q63HQ0	302 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	IQCE	Q6IPM2	695 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	SH3RF1	Q7Z6J0	888 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	PAIP2	Q9BPZ3	127 aa	Known RBP	13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	TRIM6	Q9C030	488 aa	Predicted RBP	13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.23	□□□□□ -0.29	7e-15	■■■■□ 23
SPG7-222	ENST00000569820	TMEM260	Q9NX78	707 aa		13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	BIN2	Q9UBW5	565 aa	Predicted RBP	13.23	□□□□□ -0.29
SPG7-222	ENST00000569820	MYH7B	A7E2Y1	1941 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	MEFV	O15553	781 aa	Predicted RBP	13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	LONP1	P36776	959 aa	Known RBP	13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	SLC1A4	P43007	532 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	KRT31	Q15323	416 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	CCDC122	Q5T0U0	273 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	EHBP1	Q8NDI1	1231 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	CHP1	Q99653	195 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	CD2AP	Q9Y5K6	639 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820		F5H6K3	240 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	LAD1	O00515	517 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	WNT10B	O00744	389 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	CHUK	O15111	745 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	RAD21	O60216	631 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	NDUFB10	O96000	172 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	AFM	P43652	599 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	KLRC3	Q07444	240 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	NEK8	Q86SG6	692 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	FAM83A	Q86UY5	434 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	TBCK	Q8TEA7	893 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	JDP2	Q8WYK2	163 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	GMCL1	Q96IK5	515 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	RUFY1	Q96T51	708 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	TMEM39B	Q9GZU3	492 aa		13.22	□□□□□ -0.29
SPG7-222	ENST00000569820	RIC8A	Q9NPQ8	531 aa		13.22	□□□□□ -0.29

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