RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 LRRC55Q6ZSA7 311 aa20.15■□□□□ 0.82
SMPD3-211ENST00000568373 SAMD7Q7Z3H4 446 aa20.15■□□□□ 0.82
SMPD3-211ENST00000568373 KIAA1683Q9H0B3 1180 aa20.15■□□□□ 0.82
SMPD3-211ENST00000568373 DEFB129Q9H1M3 183 aa20.15■□□□□ 0.82
SMPD3-211ENST00000568373 LUC7L2Q9Y383 392 aaKnown RBP20.15■□□□□ 0.82
SMPD3-211ENST00000568373 FANCGO15287 622 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 ICAM1P05362 532 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 PSMC6P62333 389 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 RASSF7Q02833 373 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 ZCWPW2Q504Y3 356 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 SYT2Q8N9I0 419 aaPredicted RBP20.14■□□□□ 0.81
SMPD3-211ENST00000568373 RETREG2Q8NC44 543 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 OR8K1Q8NGG5 319 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 DNAJC7Q99615 494 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 POLR3CQ9BUI4 534 aaPredicted RBP20.14■□□□□ 0.81
SMPD3-211ENST00000568373 NUP58Q9BVL2 599 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 CNOT7Q9UIV1 285 aaKnown RBP20.14■□□□□ 0.81
SMPD3-211ENST00000568373 ZNF215Q9UL58 517 aaPredicted RBP20.14■□□□□ 0.81
SMPD3-211ENST00000568373 ASTN2O75129 1339 aaPredicted RBP20.14■□□□□ 0.81
SMPD3-211ENST00000568373 FZD9O00144 591 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 MEIS1O00470 390 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 CTNND1O60716 968 aaKnown RBP20.14■□□□□ 0.81
SMPD3-211ENST00000568373 KRT18P05783 430 aaKnown RBP20.14■□□□□ 0.81
SMPD3-211ENST00000568373 CACNB1Q02641 598 aaPredicted RBP20.14■□□□□ 0.81
SMPD3-211ENST00000568373 NCBP1Q09161 790 aaKnown RBP20.14■□□□□ 0.81
SMPD3-211ENST00000568373 TBC1D10BQ4KMP7 808 aaPredicted RBP20.14■□□□□ 0.81
SMPD3-211ENST00000568373 HERC4Q5GLZ8 1057 aaPredicted RBP20.14■□□□□ 0.81
SMPD3-211ENST00000568373 FKBP15Q5T1M5 1219 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 MTERF4Q7Z6M4 381 aaKnown RBP20.14■□□□□ 0.81
SMPD3-211ENST00000568373 PRPF38AQ8NAV1 312 aaKnown RBP20.14■□□□□ 0.81
SMPD3-211ENST00000568373 ERGIC2Q96RQ1 377 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 EIF2AK1Q9BQI3 630 aaKnown RBP20.14■□□□□ 0.81
SMPD3-211ENST00000568373 SLF1Q9BQI6 1058 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 TTYH3Q9C0H2 523 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 HACL1Q9UJ83 578 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 CCPG1Q9ULG6 757 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 GJA3Q9Y6H8 435 aa20.14■□□□□ 0.81
SMPD3-211ENST00000568373 ZNF536O15090 1300 aa20.13■□□□□ 0.81
SMPD3-211ENST00000568373 EML1O00423 815 aa20.13■□□□□ 0.81
SMPD3-211ENST00000568373 NKRFO15226 690 aaKnown RBP eCLIP20.13■□□□□ 0.81
SMPD3-211ENST00000568373 RRP9O43818 475 aaKnown RBP20.13■□□□□ 0.81
SMPD3-211ENST00000568373 SLU7O95391 586 aaKnown RBP20.13■□□□□ 0.81
SMPD3-211ENST00000568373 PABPC4Q13310 644 aaKnown RBP eCLIP20.13■□□□□ 0.81
SMPD3-211ENST00000568373 KCTD17Q8N5Z5 321 aa20.13■□□□□ 0.81
SMPD3-211ENST00000568373 ANKRD7Q92527 254 aa20.13■□□□□ 0.81
SMPD3-211ENST00000568373 SLC5A5Q92911 643 aa20.13■□□□□ 0.81
SMPD3-211ENST00000568373 AGBL1Q96MI9 1066 aa20.13■□□□□ 0.81
SMPD3-211ENST00000568373 MAP7D2Q96T17 732 aa20.13■□□□□ 0.81
SMPD3-211ENST00000568373 FGFBP2Q9BYJ0 223 aa20.13■□□□□ 0.81
SMPD3-211ENST00000568373 TBC1D7Q9P0N9 293 aa20.13■□□□□ 0.81
SMPD3-211ENST00000568373 PSMD10O75832 226 aa20.12■□□□□ 0.81
SMPD3-211ENST00000568373 TRIM21P19474 475 aaKnown RBP20.12■□□□□ 0.81
SMPD3-211ENST00000568373 PRELPP51888 382 aa20.12■□□□□ 0.81
SMPD3-211ENST00000568373 GNG11P61952 73 aa20.12■□□□□ 0.81
SMPD3-211ENST00000568373 CYP4A11Q02928 519 aa20.12■□□□□ 0.81
SMPD3-211ENST00000568373 RAD51AP2Q09MP3 1159 aa20.12■□□□□ 0.81
SMPD3-211ENST00000568373 MAN2A1Q16706 1144 aa20.12■□□□□ 0.81
SMPD3-211ENST00000568373 VWA3BQ502W6 1294 aa20.12■□□□□ 0.81
SMPD3-211ENST00000568373 CEP55Q53EZ4 464 aa20.12■□□□□ 0.81
SMPD3-211ENST00000568373 LRCH2Q5VUJ6 765 aa20.12■□□□□ 0.81
SMPD3-211ENST00000568373 OTOP1Q7RTM1 612 aa20.12■□□□□ 0.81
SMPD3-211ENST00000568373 ERO1AQ96HE7 468 aa20.12■□□□□ 0.81
SMPD3-211ENST00000568373 HSD17B4P51659 736 aa20.12■□□□□ 0.81
SMPD3-211ENST00000568373 UBXN2AP68543 259 aa20.12■□□□□ 0.81
SMPD3-211ENST00000568373 FKBP3Q00688 224 aaKnown RBP20.12■□□□□ 0.81
SMPD3-211ENST00000568373 PPP2R5CQ13362 524 aa20.12■□□□□ 0.81
SMPD3-211ENST00000568373 FHDC1Q9C0D6 1143 aaPredicted RBP20.12■□□□□ 0.81
SMPD3-211ENST00000568373 RASSF10A6NK89 507 aa20.11■□□□□ 0.81
SMPD3-211ENST00000568373 KIF20AO95235 890 aa20.11■□□□□ 0.81
SMPD3-211ENST00000568373 KLK7P49862 253 aa20.11■□□□□ 0.81
SMPD3-211ENST00000568373 GIT2Q14161 759 aa20.11■□□□□ 0.81
SMPD3-211ENST00000568373 FIGNQ5HY92 759 aa20.11■□□□□ 0.81
SMPD3-211ENST00000568373 SCFD1Q8WVM8 642 aa20.11■□□□□ 0.81
SMPD3-211ENST00000568373 WDR24Q96S15 920 aa20.11■□□□□ 0.81
SMPD3-211ENST00000568373 NDST4Q9H3R1 872 aa20.11■□□□□ 0.81
SMPD3-211ENST00000568373 SETQ01105 290 aaPredicted RBP20.11■□□□□ 0.81
SMPD3-211ENST00000568373 TSR1Q2NL82 804 aaKnown RBP20.11■□□□□ 0.81
SMPD3-211ENST00000568373 HOOK2Q96ED9 719 aa20.11■□□□□ 0.81
SMPD3-211ENST00000568373 HSD17B14Q9BPX1 270 aa20.11■□□□□ 0.81
SMPD3-211ENST00000568373 REEP2Q9BRK0 252 aa20.11■□□□□ 0.81
SMPD3-211ENST00000568373 TUFT1Q9NNX1 390 aa20.11■□□□□ 0.81
SMPD3-211ENST00000568373 RGL1Q9NZL6 768 aa20.11■□□□□ 0.81
SMPD3-211ENST00000568373 RABGAP1Q9Y3P9 1069 aa20.11■□□□□ 0.81
SMPD3-211ENST00000568373 EYA4O95677 639 aa20.1■□□□□ 0.81
SMPD3-211ENST00000568373 CASQ1P31415 396 aa20.1■□□□□ 0.81
SMPD3-211ENST00000568373 HSP90AA2PQ14568 343 aaPredicted RBP20.1■□□□□ 0.81
SMPD3-211ENST00000568373 IQCDQ96DY2 449 aa20.1■□□□□ 0.81
SMPD3-211ENST00000568373 PCMTD1Q96MG8 357 aaPredicted RBP20.1■□□□□ 0.81
SMPD3-211ENST00000568373 CHP1Q99653 195 aa20.1■□□□□ 0.81
SMPD3-211ENST00000568373 ZHX3Q9H4I2 956 aa20.1■□□□□ 0.81
SMPD3-211ENST00000568373 LZTFL1Q9NQ48 299 aa20.1■□□□□ 0.81
SMPD3-211ENST00000568373 EMILIN3Q9NT22 766 aa20.1■□□□□ 0.81
SMPD3-211ENST00000568373 AGPAT5Q9NUQ2 364 aa20.1■□□□□ 0.81
SMPD3-211ENST00000568373 TRAF5O00463 557 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 GAS7O60861 476 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 ZBED6P86452 979 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 NAA30Q147X3 362 aaPredicted RBP20.09■□□□□ 0.81
SMPD3-211ENST00000568373 MEA1Q16626 185 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 NBPF12Q5TAG4 269 aaPredicted RBP20.09■□□□□ 0.81
SMPD3-211ENST00000568373 ACRBPQ8NEB7 543 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms