RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 C1orf53Q5VUE5 145 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 NAA16Q6N069 864 aaPredicted RBP7.32□□□□□ -1.24
UBFD1-204ENST00000565634 CWC27Q6UX04 472 aaKnown RBP7.32□□□□□ -1.24
UBFD1-204ENST00000565634 PGBD3Q8N328 593 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 LCORLQ8N3X6 602 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.32□□□□□ -1.24
UBFD1-204ENST00000565634 RHBDD1Q8TEB9 315 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 GPATCH3Q96I76 525 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 STRBPQ96SI9 672 aaKnown RBP7.32□□□□□ -1.24
UBFD1-204ENST00000565634 RIOK1Q9BRS2 568 aaKnown RBP7.32□□□□□ -1.24
UBFD1-204ENST00000565634 FSD1Q9BTV5 496 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 AS3MTQ9HBK9 375 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 AATFQ9NY61 560 aaKnown RBP eCLIP7.32□□□□□ -1.24
UBFD1-204ENST00000565634 TBX21Q9UL17 535 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 ATXN7L1Q9ULK2 861 aaPredicted RBP7.32□□□□□ -1.24
UBFD1-204ENST00000565634 NOVA2Q9UNW9 492 aaKnown RBP7.32□□□□□ -1.24
UBFD1-204ENST00000565634 COG5Q9UP83 839 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 RABGAP1Q9Y3P9 1069 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 TAF6LQ9Y6J9 622 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 MYH1P12882 1939 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 PLXNA3P51805 1871 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 GSG1L2A8MUP6 293 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 MBD4O95243 580 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 PGK2P07205 417 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 ACLYP53396 1101 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 GRB10Q13322 594 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 PLS1Q14651 629 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 BMP2KLQ5H9B9 411 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 USP17L2Q6R6M4 530 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 LINC00114Q6XXX2 140 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 TMCO2Q7Z6W1 182 aaPredicted RBP7.31□□□□□ -1.24
UBFD1-204ENST00000565634 DEPDC4Q8N2C3 294 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 TMEM199Q8N511 208 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 SDR42E1Q8WUS8 393 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 SCLYQ96I15 445 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 WDR18Q9BV38 432 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 CRISPLD1Q9H336 500 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 IL23AQ9NPF7 189 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 GDF2Q9UK05 429 aaPredicted RBP7.31□□□□□ -1.24
UBFD1-204ENST00000565634 HCN2Q9UL51 889 aa7.31□□□□□ -1.24
UBFD1-204ENST00000565634 TPRP12270 2363 aaKnown RBP7.31□□□□□ -1.24
UBFD1-204ENST00000565634 MROH7-TTC4A0A0A0MT08 1334 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 GAKO14976 1311 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 C19orf81C9J6K1 198 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 HOXC6P09630 235 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 RARBP10826 455 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 BMP4P12644 408 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 ERCC3P19447 782 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 KCNA5P22460 613 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 FGFR3P22607 806 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 PTGS1P23219 599 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 CCNA1P78396 465 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 TTLL4Q14679 1199 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 TTF1Q15361 905 aaPredicted RBP7.3□□□□□ -1.24
UBFD1-204ENST00000565634 UBE3CQ15386 1083 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 TLR1Q15399 786 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 C8orf34Q49A92 452 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 OXLD1Q5BKU9 147 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 EFHC2Q5JST6 749 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 SPTY2D1Q68D10 685 aaPredicted RBP7.3□□□□□ -1.24
UBFD1-204ENST00000565634 CATSPERGQ6ZRH7 1159 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 EP400NLQ6ZTU2 488 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 ANKRD33Q7Z3H0 272 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 DEFB128Q7Z7B8 93 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 RNF180Q86T96 592 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 DZIP1Q86YF9 867 aaKnown RBP7.3□□□□□ -1.24
UBFD1-204ENST00000565634 RNF135Q8IUD6 432 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 STK11IPQ8N1F8 1099 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 ACER1Q8TDN7 264 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 PPP1R13LQ8WUF5 828 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 TGFBRAP1Q8WUH2 860 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 MOV10L1Q9BXT6 1211 aaKnown RBP7.3□□□□□ -1.24
UBFD1-204ENST00000565634 DNAJC18Q9H819 358 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 EPB41L4AQ9HCS5 686 aaPredicted RBP7.3□□□□□ -1.24
UBFD1-204ENST00000565634 DNAAF2Q9NVR5 837 aaKnown RBP7.3□□□□□ -1.24
UBFD1-204ENST00000565634 SAP30BPQ9UHR5 308 aaKnown RBP7.3□□□□□ -1.24
UBFD1-204ENST00000565634 MTUS1Q9ULD2 1270 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 MKL2Q9ULH7 1088 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 SLC4A7Q9Y6M7 1214 aa7.3□□□□□ -1.24
UBFD1-204ENST00000565634 COL4A4P53420 1690 aaPredicted RBP7.3□□□□□ -1.24
UBFD1-204ENST00000565634 USP17L15C9J2P7 530 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 USP17L13C9JLJ4 530 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 USP17L11C9JVI0 530 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 USP17L18D6R9N7 530 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 USP17L22D6RA61 530 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 USP17L17D6RBQ6 530 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 USP17L19D6RCP7 530 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 USP17L20D6RJB6 530 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 H3BQ06 376 aaPredicted RBP7.29□□□□□ -1.24
UBFD1-204ENST00000565634 SGSM2O43147 1006 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 DCXO43602 365 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 LPXNO60711 386 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 ALADP13716 330 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 SCNN1AP37088 669 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 PLCD1P51178 756 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 USP17L24Q0WX57 530 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 TCF15Q12870 199 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 ELOAQ14241 798 aaKnown RBP7.29□□□□□ -1.24
UBFD1-204ENST00000565634 MCMDC2Q4G0Z9 681 aa7.29□□□□□ -1.24
UBFD1-204ENST00000565634 CRTC2Q53ET0 693 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms