RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 RETREG2Q8NC44 543 aa17.82■□□□□ 0.44
AC009088.3-201ENST00000563605 CCDC12Q8WUD4 166 aaPredicted RBP17.82■□□□□ 0.44
AC009088.3-201ENST00000563605 CDHR1Q96JP9 859 aa17.82■□□□□ 0.44
AC009088.3-201ENST00000563605 GPR20Q99678 358 aa17.82■□□□□ 0.44
AC009088.3-201ENST00000563605 SENP7Q9BQF6 1050 aa17.82■□□□□ 0.44
AC009088.3-201ENST00000563605 MXRA8Q9BRK3 442 aa17.82■□□□□ 0.44
AC009088.3-201ENST00000563605 C16orf70Q9BSU1 422 aa17.82■□□□□ 0.44
AC009088.3-201ENST00000563605 WNT8AQ9H1J5 351 aa17.82■□□□□ 0.44
AC009088.3-201ENST00000563605 MYH7BA7E2Y1 1941 aa17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 HAS3O00219 553 aa17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 F2P00734 622 aa17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 LGALS2P05162 132 aa17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 HOXD8P13378 290 aaPredicted RBP17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 CLK2P49760 499 aaKnown RBP17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 AK2P54819 239 aa17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 ZNF200P98182 395 aaPredicted RBP17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 TMEM240Q5SV17 173 aa17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 CPLX2Q6PUV4 134 aaKnown RBP17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 Q7L0L9 218 aa17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 DEFB128Q7Z7B8 93 aa17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 GIMAP8Q8ND71 665 aaPredicted RBP17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 RASGRP4Q8TDF6 673 aa17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 UIMC1Q96RL1 719 aa17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 ZMYND12Q9H0C1 365 aa17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 SLKQ9H2G2 1235 aaPredicted RBP17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 IL23AQ9NPF7 189 aa17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 TPCN1Q9ULQ1 816 aa17.81■□□□□ 0.44
AC009088.3-201ENST00000563605 H3BRB1 525 aa17.8■□□□□ 0.44
AC009088.3-201ENST00000563605 FGBP02675 491 aa17.8■□□□□ 0.44
AC009088.3-201ENST00000563605 ARP10275 920 aa17.8■□□□□ 0.44
AC009088.3-201ENST00000563605 KCNA2P16389 499 aa17.8■□□□□ 0.44
AC009088.3-201ENST00000563605 GNA11P29992 359 aa17.8■□□□□ 0.44
AC009088.3-201ENST00000563605 NLRP5P59047 1200 aa17.8■□□□□ 0.44
AC009088.3-201ENST00000563605 AP3B2Q13367 1082 aa17.8■□□□□ 0.44
AC009088.3-201ENST00000563605 TRIM50Q86XT4 487 aa17.8■□□□□ 0.44
AC009088.3-201ENST00000563605 REXO1Q8N1G1 1221 aaKnown RBP17.8■□□□□ 0.44
AC009088.3-201ENST00000563605 TUT1Q9H6E5 874 aaKnown RBP17.8■□□□□ 0.44
AC009088.3-201ENST00000563605 KCNH7Q9NS40 1196 aa17.8■□□□□ 0.44
AC009088.3-201ENST00000563605 GTF2IRD1Q9UHL9 959 aa17.8■□□□□ 0.44
AC009088.3-201ENST00000563605 SCN10AQ9Y5Y9 1956 aa17.79■□□□□ 0.44
AC009088.3-201ENST00000563605 ESYT2A0FGR8 921 aa17.79■□□□□ 0.44
AC009088.3-201ENST00000563605 SREBF1P36956 1147 aa17.79■□□□□ 0.44
AC009088.3-201ENST00000563605 NEK4P51957 841 aa17.79■□□□□ 0.44
AC009088.3-201ENST00000563605 ARHGAP4P98171 946 aa17.79■□□□□ 0.44
AC009088.3-201ENST00000563605 SCRN1Q12765 414 aa17.79■□□□□ 0.44
AC009088.3-201ENST00000563605 BFSP2Q13515 415 aa17.79■□□□□ 0.44
AC009088.3-201ENST00000563605 HIC1Q14526 733 aa17.79■□□□□ 0.44
AC009088.3-201ENST00000563605 CEP55Q53EZ4 464 aa17.79■□□□□ 0.44
AC009088.3-201ENST00000563605 OTOP2Q7RTS6 562 aa17.79■□□□□ 0.44
AC009088.3-201ENST00000563605 SESTD1Q86VW0 696 aa17.79■□□□□ 0.44
AC009088.3-201ENST00000563605 DEFB123Q8N688 67 aa17.79■□□□□ 0.44
AC009088.3-201ENST00000563605 CCDC148Q8NFR7 591 aa17.79■□□□□ 0.44
AC009088.3-201ENST00000563605 AIFM3Q96NN9 605 aa17.79■□□□□ 0.44
AC009088.3-201ENST00000563605 MAFGO15525 162 aa17.78■□□□□ 0.44
AC009088.3-201ENST00000563605 TCF7P36402 384 aaPredicted RBP17.78■□□□□ 0.44
AC009088.3-201ENST00000563605 ANKRD1Q15327 319 aa17.78■□□□□ 0.44
AC009088.3-201ENST00000563605 PSRC1Q6PGN9 363 aaPredicted RBP17.78■□□□□ 0.44
AC009088.3-201ENST00000563605 TEX2Q8IWB9 1127 aa17.78■□□□□ 0.44
AC009088.3-201ENST00000563605 RPUSD2Q8IZ73 545 aaKnown RBP17.78■□□□□ 0.44
AC009088.3-201ENST00000563605 NECAB1Q8N987 351 aa17.78■□□□□ 0.44
AC009088.3-201ENST00000563605 BICD2Q8TD16 824 aa17.78■□□□□ 0.44
AC009088.3-201ENST00000563605 SEPT1Q8WYJ6 367 aa17.78■□□□□ 0.44
AC009088.3-201ENST00000563605 FAM161BQ96MY7 647 aa17.78■□□□□ 0.44
AC009088.3-201ENST00000563605 CTAGE1Q96RT6 745 aa17.78■□□□□ 0.44
AC009088.3-201ENST00000563605 GSTTP1A0A1W2PQM5 241 aa17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 C17orf102A2RUQ5 167 aa17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 RBAK-RBAKDNI3L0D1 243 aa17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 DDX39AO00148 427 aaKnown RBP17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 MEIS1O00470 390 aa17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 PFKFB2O60825 505 aa17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 DEXIO95424 95 aa17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 IQCF3P0C7M6 154 aa17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 SMIM10L2AP0DMW4 78 aa17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 SMIM10L2BP0DMW5 78 aa17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 PLA2G4DQ86XP0 818 aa17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 CCDC155Q8N6L0 562 aa17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 DHX38Q92620 1227 aaKnown RBP17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 GLG1Q92896 1179 aa17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 SDF4Q9BRK5 362 aa17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 FTOQ9C0B1 505 aaKnown RBP eCLIP17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 RNPEPQ9H4A4 650 aa17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 AGO4Q9HCK5 861 aaKnown RBP17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 SETD4Q9NVD3 440 aa17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 ZNF215Q9UL58 517 aaPredicted RBP17.77■□□□□ 0.44
AC009088.3-201ENST00000563605 GRXCR1A8MXD5 290 aa17.76■□□□□ 0.43
AC009088.3-201ENST00000563605 FAM86B1E9PN63 330 aa17.76■□□□□ 0.43
AC009088.3-201ENST00000563605 CDKL5O76039 1030 aa17.76■□□□□ 0.43
AC009088.3-201ENST00000563605 FAM86B2P0C5J1 330 aa17.76■□□□□ 0.43
AC009088.3-201ENST00000563605 MARK3P27448 753 aa17.76■□□□□ 0.43
AC009088.3-201ENST00000563605 MCTP2Q6DN12 878 aa17.76■□□□□ 0.43
AC009088.3-201ENST00000563605 FAM109BQ6ICB4 259 aaPredicted RBP17.76■□□□□ 0.43
AC009088.3-201ENST00000563605 ATP6V0A1Q93050 837 aa17.76■□□□□ 0.43
AC009088.3-201ENST00000563605 JPH1Q9HDC5 661 aaPredicted RBP17.76■□□□□ 0.43
AC009088.3-201ENST00000563605 SH3GLB2Q9NR46 395 aa17.76■□□□□ 0.43
AC009088.3-201ENST00000563605 CXXC1Q9P0U4 656 aaPredicted RBP17.76■□□□□ 0.43
AC009088.3-201ENST00000563605 SLC9A2Q9UBY0 812 aa17.76■□□□□ 0.43
AC009088.3-201ENST00000563605 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.75■□□□□ 0.43
AC009088.3-201ENST00000563605 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.75■□□□□ 0.43
AC009088.3-201ENST00000563605 ZBBXA8MT70 800 aa17.75■□□□□ 0.43
AC009088.3-201ENST00000563605 PITPNM1O00562 1244 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms