RNA–Protein interactions for RNA: ENST00000559406.5

TNFAIP2-205, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 1,799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-205ENST00000559406 VTA1Q9NP79 307 aa18.4■□□□□ 0.54
TNFAIP2-205ENST00000559406 RBM47A0AV96 593 aaKnown RBP18.39■□□□□ 0.53
TNFAIP2-205ENST00000559406 EML1O00423 815 aa18.39■□□□□ 0.53
TNFAIP2-205ENST00000559406 CUTAO60888 179 aa18.39■□□□□ 0.53
TNFAIP2-205ENST00000559406 ZNF865P0CJ78 1059 aaPredicted RBP18.39■□□□□ 0.53
TNFAIP2-205ENST00000559406 ADCYAP1R1P41586 468 aa18.39■□□□□ 0.53
TNFAIP2-205ENST00000559406 FXR2P51116 673 aaKnown RBP eCLIP18.39■□□□□ 0.53
TNFAIP2-205ENST00000559406 LRCH2Q5VUJ6 765 aa18.39■□□□□ 0.53
TNFAIP2-205ENST00000559406 ADALQ6DHV7 355 aa18.39■□□□□ 0.53
TNFAIP2-205ENST00000559406 SLFN12Q8IYM2 578 aa18.39■□□□□ 0.53
TNFAIP2-205ENST00000559406 EPSTI1Q96J88 318 aa18.39■□□□□ 0.53
TNFAIP2-205ENST00000559406 UNC45AQ9H3U1 944 aa18.39■□□□□ 0.53
TNFAIP2-205ENST00000559406 DDX41Q9UJV9 622 aaKnown RBP18.39■□□□□ 0.53
TNFAIP2-205ENST00000559406 PCDHA12Q9UN75 941 aa18.39■□□□□ 0.53
TNFAIP2-205ENST00000559406 TRIM17Q9Y577 477 aa18.39■□□□□ 0.53
TNFAIP2-205ENST00000559406 POTEFA5A3E0 1075 aa18.38■□□□□ 0.53
TNFAIP2-205ENST00000559406 MAFGO15525 162 aa18.38■□□□□ 0.53
TNFAIP2-205ENST00000559406 MARCH6O60337 910 aa18.38■□□□□ 0.53
TNFAIP2-205ENST00000559406 CCNE2O96020 404 aa18.38■□□□□ 0.53
TNFAIP2-205ENST00000559406 HSPA1AP0DMV8 641 aaKnown RBP18.38■□□□□ 0.53
TNFAIP2-205ENST00000559406 HSPA1BP0DMV9 641 aaKnown RBP18.38■□□□□ 0.53
TNFAIP2-205ENST00000559406 ABHD16BQ9H3Z7 469 aa18.38■□□□□ 0.53
TNFAIP2-205ENST00000559406 ZHX1Q9UKY1 873 aaPredicted RBP18.38■□□□□ 0.53
TNFAIP2-205ENST00000559406 GAS7O60861 476 aa18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 GNRH1P01148 92 aa18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 HOXD10P28358 340 aa18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 RIT2Q99578 217 aa18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 MMTAG2Q9BU76 263 aaKnown RBP18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 A0A087X0B3 334 aa18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 CHMP2AO43633 222 aa18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 ADCY3O60266 1144 aa18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 PPP2R5CQ13362 524 aa18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 CCDC144BQ3MJ40 725 aa18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 RESP18Q5W5W9 173 aa18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 CYFIP1Q7L576 1253 aa18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 ZNF579Q8NAF0 562 aaKnown RBP18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 SYMPKQ92797 1274 aaKnown RBP18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 LENG1Q96BZ8 264 aaPredicted RBP18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 CDHR1Q96JP9 859 aa18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 TEKT3Q9BXF9 490 aa18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 PTCH2Q9Y6C5 1203 aa18.37■□□□□ 0.53
TNFAIP2-205ENST00000559406 A0A1B0GVL5 298 aa18.36■□□□□ 0.53
TNFAIP2-205ENST00000559406 TXNP10599 105 aaKnown RBP18.36■□□□□ 0.53
TNFAIP2-205ENST00000559406 CYBAP13498 195 aa18.36■□□□□ 0.53
TNFAIP2-205ENST00000559406 SMPD1P17405 629 aa18.36■□□□□ 0.53
TNFAIP2-205ENST00000559406 LIG1P18858 919 aa18.36■□□□□ 0.53
TNFAIP2-205ENST00000559406 LONP1P36776 959 aaKnown RBP18.36■□□□□ 0.53
TNFAIP2-205ENST00000559406 CACNB2Q08289 660 aaPredicted RBP18.36■□□□□ 0.53
TNFAIP2-205ENST00000559406 CSPP1Q1MSJ5 1256 aa18.36■□□□□ 0.53
TNFAIP2-205ENST00000559406 NCAPH2Q6IBW4 605 aa18.36■□□□□ 0.53
TNFAIP2-205ENST00000559406 GPT2Q8TD30 523 aa18.36■□□□□ 0.53
TNFAIP2-205ENST00000559406 SCFD2Q8WU76 684 aa18.36■□□□□ 0.53
TNFAIP2-205ENST00000559406 SENP7Q9BQF6 1050 aa18.36■□□□□ 0.53
TNFAIP2-205ENST00000559406 NFASCO94856 1347 aa18.36■□□□□ 0.53
TNFAIP2-205ENST00000559406 BRCA2P51587 3418 aa18.36■□□□□ 0.53
TNFAIP2-205ENST00000559406 A0A1W2PQ27 194 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 A0A1W2PQ64 194 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 A0A1W2PQD8 194 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 FARP2O94887 1054 aaPredicted RBP18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 GGPS1O95749 300 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 TGFB3P10600 412 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 LBX1P52954 281 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 UBE2HP62256 183 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 PDIA5Q14554 519 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 ECM1Q16610 540 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 RAET1EQ8TD07 263 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 LRRC15Q8TF66 581 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 TBC1D22BQ9NU19 505 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 LRWD1Q9UFC0 647 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 CMA1P23946 247 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 SP4Q02446 784 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 TTLL4Q14679 1199 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 TMEM266Q2M3C6 531 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 FSIP1Q8NA03 581 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 HPSEQ9Y251 543 aa18.35■□□□□ 0.53
TNFAIP2-205ENST00000559406 GOLGA6L22H0YM25 854 aa18.34■□□□□ 0.53
TNFAIP2-205ENST00000559406 PFKFB1P16118 471 aa18.34■□□□□ 0.53
TNFAIP2-205ENST00000559406 DEKP35659 375 aaKnown RBP18.34■□□□□ 0.53
TNFAIP2-205ENST00000559406 NDUFA8P51970 172 aa18.34■□□□□ 0.53
TNFAIP2-205ENST00000559406 IRX5P78411 483 aaPredicted RBP18.34■□□□□ 0.53
TNFAIP2-205ENST00000559406 ARHGAP1Q07960 439 aa18.34■□□□□ 0.53
TNFAIP2-205ENST00000559406 CELF3Q5SZQ8 465 aaKnown RBP18.34■□□□□ 0.53
TNFAIP2-205ENST00000559406 MFSD14CQ5VZR4 134 aa18.34■□□□□ 0.53
TNFAIP2-205ENST00000559406 SDF4Q9BRK5 362 aa18.34■□□□□ 0.53
TNFAIP2-205ENST00000559406 JPH1Q9HDC5 661 aaPredicted RBP18.34■□□□□ 0.53
TNFAIP2-205ENST00000559406 SLC9A2Q9UBY0 812 aa18.34■□□□□ 0.53
TNFAIP2-205ENST00000559406 FAM237AA0A1B0GTK4 181 aa18.33■□□□□ 0.53
TNFAIP2-205ENST00000559406 CCND3P30281 292 aaPredicted RBP18.33■□□□□ 0.53
TNFAIP2-205ENST00000559406 ARHGEF6Q15052 776 aa18.33■□□□□ 0.53
TNFAIP2-205ENST00000559406 KCNV1Q6PIU1 500 aa18.33■□□□□ 0.53
TNFAIP2-205ENST00000559406 PXYLP1Q8TE99 480 aa18.33■□□□□ 0.53
TNFAIP2-205ENST00000559406 MRPS27Q92552 414 aaKnown RBP18.33■□□□□ 0.53
TNFAIP2-205ENST00000559406 PANK2Q9BZ23 570 aa18.33■□□□□ 0.53
TNFAIP2-205ENST00000559406 PTPN22Q9Y2R2 807 aa18.33■□□□□ 0.53
TNFAIP2-205ENST00000559406 MYH9P35579 1960 aaKnown RBP18.33■□□□□ 0.52
TNFAIP2-205ENST00000559406 DDX11L8A8MPP1 907 aa18.32■□□□□ 0.52
TNFAIP2-205ENST00000559406 MED24O75448 989 aa18.32■□□□□ 0.52
TNFAIP2-205ENST00000559406 HMGCRP04035 888 aa18.32■□□□□ 0.52
TNFAIP2-205ENST00000559406 PRKAR2AP13861 404 aaKnown RBP18.32■□□□□ 0.52
TNFAIP2-205ENST00000559406 SNW1Q13573 536 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms