RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 CLTBP09497 229 aa18.04■□□□□ 0.48
RABGGTA-206ENST00000558649 GUCY1B3Q02153 619 aa18.04■□□□□ 0.48
RABGGTA-206ENST00000558649 NBPF20Q3BBV1 942 aa18.04■□□□□ 0.48
RABGGTA-206ENST00000558649 KRT25Q7Z3Z0 450 aa18.04■□□□□ 0.48
RABGGTA-206ENST00000558649 SH3RF1Q7Z6J0 888 aa18.04■□□□□ 0.48
RABGGTA-206ENST00000558649 GIMAP8Q8ND71 665 aaPredicted RBP18.04■□□□□ 0.48
RABGGTA-206ENST00000558649 CRYGNQ8WXF5 182 aa18.04■□□□□ 0.48
RABGGTA-206ENST00000558649 TMX3Q96JJ7 454 aa18.04■□□□□ 0.48
RABGGTA-206ENST00000558649 SENP7Q9BQF6 1050 aa18.04■□□□□ 0.48
RABGGTA-206ENST00000558649 BRMS1Q9HCU9 246 aa18.04■□□□□ 0.48
RABGGTA-206ENST00000558649 PDLIM7Q9NR12 457 aa18.04■□□□□ 0.48
RABGGTA-206ENST00000558649 LTBP2Q14767 1821 aa18.04■□□□□ 0.48
RABGGTA-206ENST00000558649 SCN10AQ9Y5Y9 1956 aa18.04■□□□□ 0.48
RABGGTA-206ENST00000558649 CCDC194A0A1B0GVG4 234 aa18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 M0R2N6 131 aa18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 DDX39AO00148 427 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 MEIS1O00470 390 aa18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 TLR3O15455 904 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 KRT2P35908 639 aa18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 CDK7P50613 346 aa18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 NONOQ15233 471 aaKnown RBP eCLIP18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 INF2Q27J81 1249 aa18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 PRR16Q569H4 304 aa18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 UTP14CQ5TAP6 766 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 ANKRD33Q7Z3H0 272 aa18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 FAM184AQ8NB25 1140 aa18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 SDF4Q9BRK5 362 aa18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 AGO4Q9HCK5 861 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 TMEM39AQ9NV64 488 aa18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 DNAH12Q6ZR08 3092 aa18.03■□□□□ 0.48
RABGGTA-206ENST00000558649 IGLV3-22A0A075B6J6 115 aa18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 MAFGO15525 162 aa18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 MCM2P49736 904 aa18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 PSEN2P49810 448 aa18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 HMGN5P82970 282 aaKnown RBP18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 SETQ01105 290 aaPredicted RBP18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 FAAP100Q0VG06 881 aa18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 NR5A1Q13285 461 aa18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 MFSD10Q14728 455 aa18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 KRT40Q6A162 431 aa18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 PIK3AP1Q6ZUJ8 805 aa18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 NIPA1Q7RTP0 329 aa18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 FAM126BQ8IXS8 530 aa18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 SLC43A3Q8NBI5 491 aa18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 KAT2BQ92831 832 aa18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 GPR20Q99678 358 aa18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 TRPV6Q9H1D0 765 aa18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 JPH1Q9HDC5 661 aaPredicted RBP18.02■□□□□ 0.48
RABGGTA-206ENST00000558649 TRIM43BA6NCK2 446 aa18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 B4GALT4O60513 344 aa18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 PPFIA4O75335 1185 aa18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 MMP1P03956 469 aa18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 LGALS2P05162 132 aa18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 MDM2Q00987 491 aaPredicted RBP18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 ITGB3BPQ13352 177 aaPredicted RBP18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 KIAA0753Q2KHM9 967 aa18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 CHRDL2Q6WN34 429 aa18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 TRIM50Q86XT4 487 aa18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 IL27Q8NEV9 243 aa18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 TRIM43Q96BQ3 446 aaPredicted RBP18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 C8orf76Q96K31 380 aa18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 TOX2Q96NM4 488 aa18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 ZNF577Q9BSK1 485 aa18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 KATNAL1Q9BW62 490 aa18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 TRMT13Q9NUP7 481 aaKnown RBP18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 SLC9A2Q9UBY0 812 aa18.01■□□□□ 0.47
RABGGTA-206ENST00000558649 FAM205CA6NFA0 338 aa18■□□□□ 0.47
RABGGTA-206ENST00000558649 IPO5O00410 1097 aaKnown RBP18■□□□□ 0.47
RABGGTA-206ENST00000558649 TDP2O95551 362 aa18■□□□□ 0.47
RABGGTA-206ENST00000558649 F2P00734 622 aa18■□□□□ 0.47
RABGGTA-206ENST00000558649 HOXD8P13378 290 aaPredicted RBP18■□□□□ 0.47
RABGGTA-206ENST00000558649 TCF7P36402 384 aaPredicted RBP18■□□□□ 0.47
RABGGTA-206ENST00000558649 MAGEA10P43363 369 aaPredicted RBP18■□□□□ 0.47
RABGGTA-206ENST00000558649 USP11P51784 963 aa18■□□□□ 0.47
RABGGTA-206ENST00000558649 LETM2Q2VYF4 491 aa18■□□□□ 0.47
RABGGTA-206ENST00000558649 DIS3L2Q8IYB7 885 aaKnown RBP18■□□□□ 0.47
RABGGTA-206ENST00000558649 C7orf31Q8N865 590 aa18■□□□□ 0.47
RABGGTA-206ENST00000558649 LBHD1Q9BQE6 289 aaPredicted RBP18■□□□□ 0.47
RABGGTA-206ENST00000558649 NFASCO94856 1347 aa17.99■□□□□ 0.47
RABGGTA-206ENST00000558649 BTBD18B2RXH4 712 aa17.99■□□□□ 0.47
RABGGTA-206ENST00000558649 EDIL3O43854 480 aa17.99■□□□□ 0.47
RABGGTA-206ENST00000558649 RAG1P15918 1043 aa17.99■□□□□ 0.47
RABGGTA-206ENST00000558649 CIITAP33076 1130 aa17.99■□□□□ 0.47
RABGGTA-206ENST00000558649 EARS2Q5JPH6 523 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-206ENST00000558649 NFRKBQ6P4R8 1299 aa17.99■□□□□ 0.47
RABGGTA-206ENST00000558649 C16orf70Q9BSU1 422 aa17.99■□□□□ 0.47
RABGGTA-206ENST00000558649 PPP1R12CQ9BZL4 782 aa17.99■□□□□ 0.47
RABGGTA-206ENST00000558649 NOD1Q9Y239 953 aa17.99■□□□□ 0.47
RABGGTA-206ENST00000558649 GSTTP1A0A1W2PQM5 241 aa17.98■□□□□ 0.47
RABGGTA-206ENST00000558649 H3BRB1 525 aa17.98■□□□□ 0.47
RABGGTA-206ENST00000558649 CD4P01730 458 aa17.98■□□□□ 0.47
RABGGTA-206ENST00000558649 ACTR2P61160 394 aa17.98■□□□□ 0.47
RABGGTA-206ENST00000558649 SAFBQ15424 915 aaKnown RBP eCLIP17.98■□□□□ 0.47
RABGGTA-206ENST00000558649 NEK8Q86SG6 692 aa17.98■□□□□ 0.47
RABGGTA-206ENST00000558649 SEPT1Q8WYJ6 367 aa17.98■□□□□ 0.47
RABGGTA-206ENST00000558649 BADQ92934 168 aa17.98■□□□□ 0.47
RABGGTA-206ENST00000558649 GJA10Q969M2 543 aa17.98■□□□□ 0.47
RABGGTA-206ENST00000558649 LENG9Q96B70 501 aa17.98■□□□□ 0.47
RABGGTA-206ENST00000558649 SEZ6LQ9BYH1 1024 aa17.98■□□□□ 0.47
RABGGTA-206ENST00000558649 TUT1Q9H6E5 874 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms