RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.54■□□□□ 0.887e-7■■■■■ 30.2
XRCC3-217ENST00000556980 C16orf70Q9BSU1 422 aa20.54■□□□□ 0.88
XRCC3-217ENST00000556980 ZMYND12Q9H0C1 365 aa20.54■□□□□ 0.88
XRCC3-217ENST00000556980 IL23AQ9NPF7 189 aa20.54■□□□□ 0.88
XRCC3-217ENST00000556980 PKD2L1Q9P0L9 805 aa20.54■□□□□ 0.88
XRCC3-217ENST00000556980 HDAC6Q9UBN7 1215 aa20.54■□□□□ 0.88
XRCC3-217ENST00000556980 GTF2IRD1Q9UHL9 959 aa20.54■□□□□ 0.88
XRCC3-217ENST00000556980 LAMA3Q16787 3333 aa20.53■□□□□ 0.88
XRCC3-217ENST00000556980 LGALS2P05162 132 aa20.53■□□□□ 0.88
XRCC3-217ENST00000556980 ACRP10323 421 aa20.53■□□□□ 0.88
XRCC3-217ENST00000556980 KCNA2P16389 499 aa20.53■□□□□ 0.88
XRCC3-217ENST00000556980 GNA11P29992 359 aa20.53■□□□□ 0.88
XRCC3-217ENST00000556980 SREBF1P36956 1147 aa20.53■□□□□ 0.88
XRCC3-217ENST00000556980 CLK2P49760 499 aaKnown RBP20.53■□□□□ 0.88
XRCC3-217ENST00000556980 SSRP1Q08945 709 aaKnown RBP20.53■□□□□ 0.88
XRCC3-217ENST00000556980 BFSP2Q13515 415 aa20.53■□□□□ 0.88
XRCC3-217ENST00000556980 JAKMIP3Q5VZ66 844 aa20.53■□□□□ 0.88
XRCC3-217ENST00000556980 MCTP2Q6DN12 878 aa20.53■□□□□ 0.88
XRCC3-217ENST00000556980 REXO1Q8N1G1 1221 aaKnown RBP20.53■□□□□ 0.88
XRCC3-217ENST00000556980 CCDC155Q8N6L0 562 aa20.53■□□□□ 0.88
XRCC3-217ENST00000556980 RETREG2Q8NC44 543 aa20.53■□□□□ 0.88
XRCC3-217ENST00000556980 H3BRB1 525 aa20.52■□□□□ 0.88
XRCC3-217ENST00000556980 PITPNM1O00562 1244 aa20.52■□□□□ 0.88
XRCC3-217ENST00000556980 MAFGO15525 162 aa20.52■□□□□ 0.88
XRCC3-217ENST00000556980 ATP9AO75110 1047 aa20.52■□□□□ 0.88
XRCC3-217ENST00000556980 ARHGAP4P98171 946 aa20.52■□□□□ 0.88
XRCC3-217ENST00000556980 ANKRD1Q15327 319 aa20.52■□□□□ 0.88
XRCC3-217ENST00000556980 TMEM240Q5SV17 173 aa20.52■□□□□ 0.88
XRCC3-217ENST00000556980 ZNF365Q70YC5 407 aa20.52■□□□□ 0.88
XRCC3-217ENST00000556980 C16orf59Q7L2K0 433 aa20.52■□□□□ 0.88
XRCC3-217ENST00000556980 BICD2Q8TD16 824 aa20.52■□□□□ 0.88
XRCC3-217ENST00000556980 SCLYQ96I15 445 aa20.52■□□□□ 0.88
XRCC3-217ENST00000556980 MXRA8Q9BRK3 442 aa20.52■□□□□ 0.88
XRCC3-217ENST00000556980 TUT1Q9H6E5 874 aaKnown RBP20.52■□□□□ 0.88
XRCC3-217ENST00000556980 VPS54Q9P1Q0 977 aa20.52■□□□□ 0.88
XRCC3-217ENST00000556980 ZNF76P36508 570 aa20.51■□□□□ 0.87
XRCC3-217ENST00000556980 CEP55Q53EZ4 464 aa20.51■□□□□ 0.87
XRCC3-217ENST00000556980 UTP14CQ5TAP6 766 aaKnown RBP20.51■□□□□ 0.87
XRCC3-217ENST00000556980 RPUSD2Q8IZ73 545 aaKnown RBP20.51■□□□□ 0.87
XRCC3-217ENST00000556980 SLKQ9H2G2 1235 aaPredicted RBP20.51■□□□□ 0.87
XRCC3-217ENST00000556980 KCNH7Q9NS40 1196 aa20.51■□□□□ 0.87
XRCC3-217ENST00000556980 ZNF215Q9UL58 517 aaPredicted RBP20.51■□□□□ 0.87
XRCC3-217ENST00000556980 CDKL5O76039 1030 aa20.5■□□□□ 0.87
XRCC3-217ENST00000556980 SEC24BO95487 1268 aa20.5■□□□□ 0.87
XRCC3-217ENST00000556980 FGBP02675 491 aa20.5■□□□□ 0.87
XRCC3-217ENST00000556980 SMAD3P84022 425 aaKnown RBP20.5■□□□□ 0.87
XRCC3-217ENST00000556980 TRIM50Q86XT4 487 aa20.5■□□□□ 0.87
XRCC3-217ENST00000556980 DEFB123Q8N688 67 aa20.5■□□□□ 0.87
XRCC3-217ENST00000556980 CYP2W1Q8TAV3 490 aa20.5■□□□□ 0.87
XRCC3-217ENST00000556980 CAGE1Q8TC20 777 aa20.5■□□□□ 0.87
XRCC3-217ENST00000556980 MTIF3Q9H2K0 278 aaKnown RBP20.5■□□□□ 0.87
XRCC3-217ENST00000556980 SH3GLB2Q9NR46 395 aa20.5■□□□□ 0.87
XRCC3-217ENST00000556980 TPCN1Q9ULQ1 816 aa20.5■□□□□ 0.87
XRCC3-217ENST00000556980 TELO2Q9Y4R8 837 aa20.5■□□□□ 0.87
XRCC3-217ENST00000556980 DEXIO95424 95 aa20.49■□□□□ 0.87
XRCC3-217ENST00000556980 PFKMP08237 780 aa20.49■□□□□ 0.87
XRCC3-217ENST00000556980 RFC2P35250 354 aa20.49■□□□□ 0.87
XRCC3-217ENST00000556980 TCF7P36402 384 aaPredicted RBP20.49■□□□□ 0.87
XRCC3-217ENST00000556980 AK2P54819 239 aa20.49■□□□□ 0.87
XRCC3-217ENST00000556980 NLRP5P59047 1200 aa20.49■□□□□ 0.87
XRCC3-217ENST00000556980 IL17RAQ96F46 866 aa20.49■□□□□ 0.87
XRCC3-217ENST00000556980 CTAGE1Q96RT6 745 aa20.49■□□□□ 0.87
XRCC3-217ENST00000556980 SDF4Q9BRK5 362 aa20.49■□□□□ 0.87
XRCC3-217ENST00000556980 JPH1Q9HDC5 661 aaPredicted RBP20.49■□□□□ 0.87
XRCC3-217ENST00000556980 C17orf102A2RUQ5 167 aa20.48■□□□□ 0.87
XRCC3-217ENST00000556980 MEIS1O00470 390 aa20.48■□□□□ 0.87
XRCC3-217ENST00000556980 ADAMTS3O15072 1205 aa20.48■□□□□ 0.87
XRCC3-217ENST00000556980 SMIM10L2AP0DMW4 78 aa20.48■□□□□ 0.87
XRCC3-217ENST00000556980 SMIM10L2BP0DMW5 78 aa20.48■□□□□ 0.87
XRCC3-217ENST00000556980 SCRN1Q12765 414 aa20.48■□□□□ 0.87
XRCC3-217ENST00000556980 PTK7Q13308 1070 aa20.48■□□□□ 0.87
XRCC3-217ENST00000556980 Q7L0L9 218 aa20.48■□□□□ 0.87
XRCC3-217ENST00000556980 NIPA1Q7RTP0 329 aa20.48■□□□□ 0.87
XRCC3-217ENST00000556980 DEFB128Q7Z7B8 93 aa20.48■□□□□ 0.87
XRCC3-217ENST00000556980 AFAP1L1Q8TED9 768 aa20.48■□□□□ 0.87
XRCC3-217ENST00000556980 SEPT1Q8WYJ6 367 aa20.48■□□□□ 0.87
XRCC3-217ENST00000556980 HERVK_113Q902F9 699 aa20.48■□□□□ 0.87
XRCC3-217ENST00000556980 DHX38Q92620 1227 aaKnown RBP20.48■□□□□ 0.87
XRCC3-217ENST00000556980 PFKFB2O60825 505 aa20.47■□□□□ 0.87
XRCC3-217ENST00000556980 IQCF3P0C7M6 154 aa20.47■□□□□ 0.87
XRCC3-217ENST00000556980 ARP10275 920 aa20.47■□□□□ 0.87
XRCC3-217ENST00000556980 ZNF200P98182 395 aaPredicted RBP20.47■□□□□ 0.87
XRCC3-217ENST00000556980 OTOP2Q7RTS6 562 aa20.47■□□□□ 0.87
XRCC3-217ENST00000556980 RASGRP4Q8TDF6 673 aa20.47■□□□□ 0.87
XRCC3-217ENST00000556980 AGO4Q9HCK5 861 aaKnown RBP20.47■□□□□ 0.87
XRCC3-217ENST00000556980 SLC9A2Q9UBY0 812 aa20.47■□□□□ 0.87
XRCC3-217ENST00000556980 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.46■□□□□ 0.87
XRCC3-217ENST00000556980 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.46■□□□□ 0.87
XRCC3-217ENST00000556980 GSTTP1A0A1W2PQM5 241 aa20.46■□□□□ 0.87
XRCC3-217ENST00000556980 CYP3A4P08684 503 aa20.46■□□□□ 0.87
XRCC3-217ENST00000556980 SELPP16109 830 aa20.46■□□□□ 0.87
XRCC3-217ENST00000556980 NEK4P51957 841 aa20.46■□□□□ 0.87
XRCC3-217ENST00000556980 RBL2Q08999 1139 aa20.46■□□□□ 0.87
XRCC3-217ENST00000556980 ZNF697Q5TEC3 545 aa20.46■□□□□ 0.87
XRCC3-217ENST00000556980 RASIP1Q5U651 963 aa20.46■□□□□ 0.87
XRCC3-217ENST00000556980 FAM109BQ6ICB4 259 aaPredicted RBP20.46■□□□□ 0.87
XRCC3-217ENST00000556980 LRRC8DQ7L1W4 858 aa20.46■□□□□ 0.87
XRCC3-217ENST00000556980 PLA2G4DQ86XP0 818 aa20.46■□□□□ 0.87
XRCC3-217ENST00000556980 GLG1Q92896 1179 aa20.46■□□□□ 0.87
XRCC3-217ENST00000556980 ATP6V0A1Q93050 837 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms