RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 UPP2O95045 317 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 SMIM10L2AP0DMW4 78 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 SMIM10L2BP0DMW5 78 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 CCND2P30279 289 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 HOXA13P31271 388 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-221ENST00000556571 TRAF1Q13077 416 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 COL19A1Q14993 1142 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 TCEAL5Q5H9L2 206 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 POTEBQ6S5H4 581 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 EP400NLQ6ZTU2 488 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 APBB2Q92870 758 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 MTMR8Q96EF0 704 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 UBAC1Q9BSL1 405 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 USP26Q9BXU7 913 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 KRT23Q9C075 422 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 KCNH6Q9H252 994 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 RNPEPQ9H4A4 650 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 NSUN3Q9H649 340 aaKnown RBP13.8□□□□□ -0.2
ACTN1-221ENST00000556571 MYO7AQ13402 2215 aa13.8□□□□□ -0.2
ACTN1-221ENST00000556571 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.79□□□□□ -0.2
ACTN1-221ENST00000556571 GCOM1H8Y6P7 765 aaPredicted RBP13.79□□□□□ -0.2
ACTN1-221ENST00000556571 RBAK-RBAKDNI3L0D1 243 aa13.79□□□□□ -0.2
ACTN1-221ENST00000556571 NOP56O00567 594 aaKnown RBP13.79□□□□□ -0.2
ACTN1-221ENST00000556571 LGALS2P05162 132 aa13.79□□□□□ -0.2
ACTN1-221ENST00000556571 POLR2MP0CAP2 368 aa13.79□□□□□ -0.2
ACTN1-221ENST00000556571 GNAT1P11488 350 aa13.79□□□□□ -0.2
ACTN1-221ENST00000556571 IMMTQ16891 758 aaKnown RBP13.79□□□□□ -0.2
ACTN1-221ENST00000556571 IFIT1BQ5T764 474 aaKnown RBP13.79□□□□□ -0.2
ACTN1-221ENST00000556571 STAG2Q8N3U4 1231 aa13.79□□□□□ -0.2
ACTN1-221ENST00000556571 IL31RAQ8NI17 732 aa13.79□□□□□ -0.2
ACTN1-221ENST00000556571 IFIH1Q9BYX4 1025 aaKnown RBP13.79□□□□□ -0.2
ACTN1-221ENST00000556571 UPF3BQ9BZI7 483 aaKnown RBP13.79□□□□□ -0.2
ACTN1-221ENST00000556571 CNNM2Q9H8M5 875 aa13.79□□□□□ -0.2
ACTN1-221ENST00000556571 MICAL3Q7RTP6 2002 aa13.78□□□□□ -0.2
ACTN1-221ENST00000556571 C19orf67A6NJJ6 358 aa13.78□□□□□ -0.2
ACTN1-221ENST00000556571 PPP1R11O60927 126 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-221ENST00000556571 RB1P06400 928 aa13.78□□□□□ -0.2
ACTN1-221ENST00000556571 CTSHP09668 335 aa13.78□□□□□ -0.2
ACTN1-221ENST00000556571 ZP2Q05996 745 aa13.78□□□□□ -0.2
ACTN1-221ENST00000556571 NEDD9Q14511 834 aa13.78□□□□□ -0.2
ACTN1-221ENST00000556571 GNPTABQ3T906 1256 aa13.78□□□□□ -0.2
ACTN1-221ENST00000556571 CWC27Q6UX04 472 aaKnown RBP13.78□□□□□ -0.2
ACTN1-221ENST00000556571 ADHFE1Q8IWW8 467 aa13.78□□□□□ -0.2
ACTN1-221ENST00000556571 FIBCD1Q8N539 461 aa13.78□□□□□ -0.2
ACTN1-221ENST00000556571 GPKOWQ92917 476 aaPredicted RBP eCLIP13.78□□□□□ -0.2
ACTN1-221ENST00000556571 IL17RAQ96F46 866 aa13.78□□□□□ -0.2
ACTN1-221ENST00000556571 DSCC1Q9BVC3 393 aa13.78□□□□□ -0.2
ACTN1-221ENST00000556571 LNPKQ9C0E8 428 aa13.78□□□□□ -0.2
ACTN1-221ENST00000556571 DIAPH3Q9NSV4 1193 aa13.78□□□□□ -0.2
ACTN1-221ENST00000556571 CLDND1Q9NY35 253 aa13.78□□□□□ -0.2
ACTN1-221ENST00000556571 PALM3A6NDB9 673 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-221ENST00000556571 MYH7BA7E2Y1 1941 aa13.77□□□□□ -0.21
ACTN1-221ENST00000556571 HIP1O00291 1037 aa13.77□□□□□ -0.21
ACTN1-221ENST00000556571 STAM2O75886 525 aa13.77□□□□□ -0.21
ACTN1-221ENST00000556571 ICAM3P32942 547 aa13.77□□□□□ -0.21
ACTN1-221ENST00000556571 FAM26DQ5JW98 314 aa13.77□□□□□ -0.21
ACTN1-221ENST00000556571 METTL7BQ6UX53 244 aa13.77□□□□□ -0.21
ACTN1-221ENST00000556571 FCHSD1Q86WN1 690 aa13.77□□□□□ -0.21
ACTN1-221ENST00000556571 ZFP91Q96JP5 570 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-221ENST00000556571 OSBPL7Q9BZF2 842 aa13.77□□□□□ -0.21
ACTN1-221ENST00000556571 LMAN2LQ9H0V9 348 aa13.77□□□□□ -0.21
ACTN1-221ENST00000556571 SETD4Q9NVD3 440 aa13.77□□□□□ -0.21
ACTN1-221ENST00000556571 MAD2L2Q9UI95 211 aa13.77□□□□□ -0.21
ACTN1-221ENST00000556571 RWDD3Q9Y3V2 267 aa13.77□□□□□ -0.21
ACTN1-221ENST00000556571 SPATA31C2B4DYI2 1134 aa13.76□□□□□ -0.21
ACTN1-221ENST00000556571 C5orf67F2Z3F1 127 aa13.76□□□□□ -0.21
ACTN1-221ENST00000556571 CTNNB1P35222 781 aa13.76□□□□□ -0.21
ACTN1-221ENST00000556571 BMPR1AP36894 532 aa13.76□□□□□ -0.21
ACTN1-221ENST00000556571 MRE11P49959 708 aa13.76□□□□□ -0.21
ACTN1-221ENST00000556571 HOMER1Q86YM7 354 aa13.76□□□□□ -0.21
ACTN1-221ENST00000556571 GPR20Q99678 358 aa13.76□□□□□ -0.21
ACTN1-221ENST00000556571 C11orf84Q9BUA3 381 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-221ENST00000556571 OSBPL3Q9H4L5 887 aa13.76□□□□□ -0.21
ACTN1-221ENST00000556571 BCAS3Q9H6U6 928 aa13.76□□□□□ -0.21
ACTN1-221ENST00000556571 ZNF215Q9UL58 517 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-221ENST00000556571 COL4A6Q14031 1691 aa13.75□□□□□ -0.21
ACTN1-221ENST00000556571 LTBRP36941 435 aa13.75□□□□□ -0.21
ACTN1-221ENST00000556571 RRP1P56182 461 aaKnown RBP13.75□□□□□ -0.21
ACTN1-221ENST00000556571 ADAM17P78536 824 aa13.75□□□□□ -0.21
ACTN1-221ENST00000556571 ARHGAP4P98171 946 aa13.75□□□□□ -0.21
ACTN1-221ENST00000556571 NHLH1Q02575 133 aa13.75□□□□□ -0.21
ACTN1-221ENST00000556571 SEC23AQ15436 765 aa13.75□□□□□ -0.21
ACTN1-221ENST00000556571 SMAD2Q15796 467 aaKnown RBP13.75□□□□□ -0.21
ACTN1-221ENST00000556571 CTC1Q2NKJ3 1217 aa13.75□□□□□ -0.21
ACTN1-221ENST00000556571 CYFIP1Q7L576 1253 aa13.75□□□□□ -0.21
ACTN1-221ENST00000556571 RPAINQ86UA6 219 aa13.75□□□□□ -0.21
ACTN1-221ENST00000556571 FBXL18Q96ME1 805 aa13.75□□□□□ -0.21
ACTN1-221ENST00000556571 INPP4AQ96PE3 977 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-221ENST00000556571 PIGSQ96S52 555 aa13.75□□□□□ -0.21
ACTN1-221ENST00000556571 POP1Q99575 1024 aaKnown RBP13.75□□□□□ -0.21
ACTN1-221ENST00000556571 RIOX1Q9H6W3 641 aa13.75□□□□□ -0.21
ACTN1-221ENST00000556571 NRCAMQ92823 1304 aa13.74□□□□□ -0.21
ACTN1-221ENST00000556571 PNMA6FA0A0J9YX94 578 aa13.74□□□□□ -0.21
ACTN1-221ENST00000556571 FIBPO43427 364 aa13.74□□□□□ -0.21
ACTN1-221ENST00000556571 IRS1P35568 1242 aa13.74□□□□□ -0.21
ACTN1-221ENST00000556571 MRPS9P82933 396 aaKnown RBP13.74□□□□□ -0.21
ACTN1-221ENST00000556571 TAF2Q6P1X5 1199 aa13.74□□□□□ -0.21
ACTN1-221ENST00000556571 PLEKHM2Q8IWE5 1019 aa13.74□□□□□ -0.21
ACTN1-221ENST00000556571 LMBR1Q8WVP7 490 aa13.74□□□□□ -0.21
ACTN1-221ENST00000556571 MFSD14AQ96MC6 490 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms