RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 MSTO1Q9BUK6 570 aa18.96■□□□□ 0.63
PTPN21-208ENST00000556564 BSPRYQ5W0U4 402 aa18.96■□□□□ 0.63
PTPN21-208ENST00000556564 CASC4Q6P4E1 433 aa18.96■□□□□ 0.63
PTPN21-208ENST00000556564 LDHDQ86WU2 507 aa18.96■□□□□ 0.63
PTPN21-208ENST00000556564 TCP11Q8WWU5 503 aa18.96■□□□□ 0.63
PTPN21-208ENST00000556564 SWSAP1Q6NVH7 229 aa18.96■□□□□ 0.63
PTPN21-208ENST00000556564 C8orf74Q6P047 294 aa18.96■□□□□ 0.63
PTPN21-208ENST00000556564 SCARA5Q6ZMJ2 495 aa18.96■□□□□ 0.63
PTPN21-208ENST00000556564 POTEDQ86YR6 584 aa18.96■□□□□ 0.63
PTPN21-208ENST00000556564 RAB20Q9NX57 234 aa18.96■□□□□ 0.63
PTPN21-208ENST00000556564 COL5A2P05997 1499 aaPredicted RBP18.96■□□□□ 0.63
PTPN21-208ENST00000556564 NEDD1Q8NHV4 660 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 ATP6V0A4Q9HBG4 840 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 EMILIN3Q9NT22 766 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 INPP5FQ9Y2H2 1132 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 ORC4O43929 436 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 COPB1P53618 953 aaKnown RBP18.95■□□□□ 0.62
PTPN21-208ENST00000556564 TICAM2Q86XR7 235 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 CCDC89Q8N998 374 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 PLEKHA4Q9H4M7 779 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 POLLQ9UGP5 575 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 K7ERI5 159 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 AFPP02771 609 aaKnown RBP18.95■□□□□ 0.62
PTPN21-208ENST00000556564 GSDMAQ96QA5 445 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 DEFB129Q9H1M3 183 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 ARHGAP4P98171 946 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 FBXO33Q7Z6M2 555 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 TUBGCP2Q9BSJ2 902 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 HAUS2Q9NVX0 235 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 OPA1O60313 960 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 C17orf53Q8N3J3 647 aaPredicted RBP18.95■□□□□ 0.62
PTPN21-208ENST00000556564 IQCDQ96DY2 449 aa18.95■□□□□ 0.62
PTPN21-208ENST00000556564 ARHGEF28Q8N1W1 1705 aaKnown RBP18.94■□□□□ 0.62
PTPN21-208ENST00000556564 PXDNLA1KZ92 1463 aa18.94■□□□□ 0.62
PTPN21-208ENST00000556564 PPP1R18Q6NYC8 613 aa18.94■□□□□ 0.62
PTPN21-208ENST00000556564 CCDC105Q8IYK2 499 aa18.94■□□□□ 0.62
PTPN21-208ENST00000556564 OR8K1Q8NGG5 319 aa18.94■□□□□ 0.62
PTPN21-208ENST00000556564 PAGE5Q96GU1 130 aa18.94■□□□□ 0.62
PTPN21-208ENST00000556564 RPS12P25398 132 aaKnown RBP18.94■□□□□ 0.62
PTPN21-208ENST00000556564 BIRC2Q13490 618 aa18.94■□□□□ 0.62
PTPN21-208ENST00000556564 PTPN21Q16825 1174 aa18.94■□□□□ 0.62
PTPN21-208ENST00000556564 AMFRQ9UKV5 643 aa18.94■□□□□ 0.62
PTPN21-208ENST00000556564 WDR64B1ANS9 1081 aa18.94■□□□□ 0.62
PTPN21-208ENST00000556564 PTK2Q05397 1052 aa18.94■□□□□ 0.62
PTPN21-208ENST00000556564 ATP2C2O75185 946 aa18.94■□□□□ 0.62
PTPN21-208ENST00000556564 ENTPD3O75355 529 aa18.94■□□□□ 0.62
PTPN21-208ENST00000556564 ZFYVE28Q9HCC9 887 aa18.94■□□□□ 0.62
PTPN21-208ENST00000556564 POLD4Q9HCU8 107 aa18.94■□□□□ 0.62
PTPN21-208ENST00000556564 GABBR1Q9UBS5 961 aa18.94■□□□□ 0.62
PTPN21-208ENST00000556564 TGFB2P61812 414 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 NEDD9Q14511 834 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 HADHQ16836 314 aaKnown RBP18.93■□□□□ 0.62
PTPN21-208ENST00000556564 PNMA8AQ86V59 439 aaPredicted RBP18.93■□□□□ 0.62
PTPN21-208ENST00000556564 DHTKD1Q96HY7 919 aaPredicted RBP18.93■□□□□ 0.62
PTPN21-208ENST00000556564 BARHL2Q9NY43 387 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 SLIT1O75093 1534 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 DENND3A2RUS2 1198 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 ARHGAP6O43182 974 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 LRRN2O75325 713 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 CD58P19256 250 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 COG2Q14746 738 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 LONRF2Q1L5Z9 754 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 ODF2LQ9ULJ1 636 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 SLFN14P0C7P3 912 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 FAM151AQ8WW52 585 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 PRDM5Q9NQX1 630 aaPredicted RBP18.93■□□□□ 0.62
PTPN21-208ENST00000556564 BFSP1Q12934 665 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 CUL4AQ13619 759 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 RHPN2Q8IUC4 686 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 SERPINA10Q9UK55 444 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 ZBBXA8MT70 800 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 NSFP46459 744 aaKnown RBP18.93■□□□□ 0.62
PTPN21-208ENST00000556564 DSTYKQ6XUX3 929 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 THNSL1Q8IYQ7 743 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 DESI2Q9BSY9 194 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 TBC1D22BQ9NU19 505 aa18.93■□□□□ 0.62
PTPN21-208ENST00000556564 CCL15-CCL14A0A0B4J2E2 113 aa18.92■□□□□ 0.62
PTPN21-208ENST00000556564 CCL15Q16663 113 aa18.92■□□□□ 0.62
PTPN21-208ENST00000556564 DNAJC21Q5F1R6 531 aaKnown RBP18.92■□□□□ 0.62
PTPN21-208ENST00000556564 MICALCLQ6ZW33 695 aa18.92■□□□□ 0.62
PTPN21-208ENST00000556564 PXDNQ92626 1479 aa18.92■□□□□ 0.62
PTPN21-208ENST00000556564 MYO1EQ12965 1108 aa18.92■□□□□ 0.62
PTPN21-208ENST00000556564 TDRD7Q8NHU6 1098 aaKnown RBP18.92■□□□□ 0.62
PTPN21-208ENST00000556564 FAM167AQ96KS9 214 aa18.92■□□□□ 0.62
PTPN21-208ENST00000556564 PARK7Q99497 189 aaKnown RBP18.92■□□□□ 0.62
PTPN21-208ENST00000556564 MTMR4Q9NYA4 1195 aa18.92■□□□□ 0.62
PTPN21-208ENST00000556564 TNS2Q63HR2 1409 aa18.92■□□□□ 0.62
PTPN21-208ENST00000556564 OR6J1Q8NGC5 347 aa18.92■□□□□ 0.62
PTPN21-208ENST00000556564 MTRQ99707 1265 aa18.92■□□□□ 0.62
PTPN21-208ENST00000556564 ABCD1P33897 745 aa18.92■□□□□ 0.62
PTPN21-208ENST00000556564 RSAD2Q8WXG1 361 aa18.92■□□□□ 0.62
PTPN21-208ENST00000556564 KCNH4Q9UQ05 1017 aa18.92■□□□□ 0.62
PTPN21-208ENST00000556564 KDM6AO15550 1401 aaPredicted RBP18.92■□□□□ 0.62
PTPN21-208ENST00000556564 NME8Q8N427 588 aa18.92■□□□□ 0.62
PTPN21-208ENST00000556564 STK36Q9NRP7 1315 aa18.91■□□□□ 0.62
PTPN21-208ENST00000556564 ZNF609O15014 1411 aa18.91■□□□□ 0.62
PTPN21-208ENST00000556564 PTPREP23469 700 aa18.91■□□□□ 0.62
PTPN21-208ENST00000556564 RSRC2Q7L4I2 434 aaKnown RBP18.91■□□□□ 0.62
PTPN21-208ENST00000556564 ACTN4O43707 911 aaKnown RBP18.91■□□□□ 0.62
PTPN21-208ENST00000556564 KAZNQ674X7 775 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms