RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 PLEKHA8P1O95397 391 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 LGALS2P05162 132 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 SMIM10L2AP0DMW4 78 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 SMIM10L2BP0DMW5 78 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 RXRAP19793 462 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 HOXC8P31273 242 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 THPOP40225 353 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 KCNJ6P48051 423 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 CYFIP1Q7L576 1253 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 SERINC5Q86VE9 423 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 DBF4BQ8NFT6 615 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 RUFY2Q8WXA3 655 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 ZBED2Q9BTP6 218 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 KATNAL1Q9BW62 490 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 SUGCTQ9HAC7 445 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 MLXIPQ9HAP2 919 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 MAP3K20Q9NYL2 800 aaKnown RBP13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 FRMPD4Q14CM0 1322 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 EVPLQ92817 2033 aa13.36□□□□□ -0.27
PRPF40B-212ENST00000551111 LINC01553A4QN01 128 aa13.36□□□□□ -0.27
PRPF40B-212ENST00000551111 SPATA31C2B4DYI2 1134 aa13.36□□□□□ -0.27
PRPF40B-212ENST00000551111 H3BRB1 525 aa13.36□□□□□ -0.27
PRPF40B-212ENST00000551111 MEIS2O14770 477 aa13.36□□□□□ -0.27
PRPF40B-212ENST00000551111 TGFB3P10600 412 aa13.36□□□□□ -0.27
PRPF40B-212ENST00000551111 RALYLQ86SE5 291 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-212ENST00000551111 ZNF654Q8IZM8 581 aa13.36□□□□□ -0.27
PRPF40B-212ENST00000551111 SRBD1Q8N5C6 995 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-212ENST00000551111 SAMD3Q8N6K7 520 aa13.36□□□□□ -0.27
PRPF40B-212ENST00000551111 ATP6V0A1Q93050 837 aa13.36□□□□□ -0.27
PRPF40B-212ENST00000551111 INPP4AQ96PE3 977 aaPredicted RBP13.36□□□□□ -0.27
PRPF40B-212ENST00000551111 GPR20Q99678 358 aa13.36□□□□□ -0.27
PRPF40B-212ENST00000551111 TUT1Q9H6E5 874 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-212ENST00000551111 SETD4Q9NVD3 440 aa13.36□□□□□ -0.27
PRPF40B-212ENST00000551111 WDR81Q562E7 1941 aa13.35□□□□□ -0.27
PRPF40B-212ENST00000551111 ABHD14A-ACY1A0A1B0GW23 586 aa13.35□□□□□ -0.27
PRPF40B-212ENST00000551111 ERICH2A1L162 156 aa13.35□□□□□ -0.27
PRPF40B-212ENST00000551111 GTPBP6O43824 516 aaPredicted RBP13.35□□□□□ -0.27
PRPF40B-212ENST00000551111 LGR5O75473 907 aa13.35□□□□□ -0.27
PRPF40B-212ENST00000551111 CTSHP09668 335 aa13.35□□□□□ -0.27
PRPF40B-212ENST00000551111 ICAM3P32942 547 aa13.35□□□□□ -0.27
PRPF40B-212ENST00000551111 SP4Q02446 784 aa13.35□□□□□ -0.27
PRPF40B-212ENST00000551111 IKBKEQ14164 716 aa13.35□□□□□ -0.27
PRPF40B-212ENST00000551111 KCNV1Q6PIU1 500 aa13.35□□□□□ -0.27
PRPF40B-212ENST00000551111 CATIPQ7Z7H3 387 aa13.35□□□□□ -0.27
PRPF40B-212ENST00000551111 C17orf80Q9BSJ5 609 aa13.35□□□□□ -0.27
PRPF40B-212ENST00000551111 LRRC2Q9BYS8 371 aa13.35□□□□□ -0.27
PRPF40B-212ENST00000551111 LSG1Q9H089 658 aaKnown RBP13.35□□□□□ -0.27
PRPF40B-212ENST00000551111 C5orf42Q9H799 3197 aa13.35□□□□□ -0.27
PRPF40B-212ENST00000551111 C17orf102A2RUQ5 167 aa13.34□□□□□ -0.27
PRPF40B-212ENST00000551111 RSPH10B2B2RC85 870 aa13.34□□□□□ -0.27
PRPF40B-212ENST00000551111 PRC1O43663 620 aa13.34□□□□□ -0.27
PRPF40B-212ENST00000551111 ATP9AO75110 1047 aa13.34□□□□□ -0.27
PRPF40B-212ENST00000551111 RSPH10BP0C881 870 aa13.34□□□□□ -0.27
PRPF40B-212ENST00000551111 COL9A1P20849 921 aa13.34□□□□□ -0.27
PRPF40B-212ENST00000551111 ERVK-21P61565 698 aa13.34□□□□□ -0.27
PRPF40B-212ENST00000551111 PLEKHG4Q58EX7 1191 aa13.34□□□□□ -0.27
PRPF40B-212ENST00000551111 UTP14CQ5TAP6 766 aaKnown RBP13.34□□□□□ -0.27
PRPF40B-212ENST00000551111 KHSRPQ92945 711 aaKnown RBP eCLIP13.34□□□□□ -0.27
PRPF40B-212ENST00000551111 RAD9AQ99638 391 aa13.34□□□□□ -0.27
PRPF40B-212ENST00000551111 SPZ1Q9BXG8 430 aa13.34□□□□□ -0.27
PRPF40B-212ENST00000551111 KIAA1671Q9BY89 1806 aa13.34□□□□□ -0.27
PRPF40B-212ENST00000551111 TTC3P53804 2025 aa13.34□□□□□ -0.27
PRPF40B-212ENST00000551111 RALGAPA2Q2PPJ7 1873 aa13.33□□□□□ -0.27
PRPF40B-212ENST00000551111 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.33□□□□□ -0.28
PRPF40B-212ENST00000551111 SH2B2O14492 632 aaPredicted RBP13.33□□□□□ -0.28
PRPF40B-212ENST00000551111 PARNO95453 639 aaKnown RBP13.33□□□□□ -0.28
PRPF40B-212ENST00000551111 ADAM17P78536 824 aa13.33□□□□□ -0.28
PRPF40B-212ENST00000551111 SART3Q15020 963 aaKnown RBP13.33□□□□□ -0.28
PRPF40B-212ENST00000551111 UBE2SQ16763 222 aa13.33□□□□□ -0.28
PRPF40B-212ENST00000551111 METTL7BQ6UX53 244 aa13.33□□□□□ -0.28
PRPF40B-212ENST00000551111 MYOCDQ8IZQ8 938 aa13.33□□□□□ -0.28
PRPF40B-212ENST00000551111 CCDC82Q8N4S0 544 aa13.33□□□□□ -0.28
PRPF40B-212ENST00000551111 ZBTB10Q96DT7 871 aa13.33□□□□□ -0.28
PRPF40B-212ENST00000551111 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.28
PRPF40B-212ENST00000551111 NOP56O00567 594 aaKnown RBP13.32□□□□□ -0.28
PRPF40B-212ENST00000551111 SLC27A2O14975 620 aa13.32□□□□□ -0.28
PRPF40B-212ENST00000551111 UPP2O95045 317 aa13.32□□□□□ -0.28
PRPF40B-212ENST00000551111 NEDD9Q14511 834 aa13.32□□□□□ -0.28
PRPF40B-212ENST00000551111 PCNX4Q63HM2 1172 aa13.32□□□□□ -0.28
PRPF40B-212ENST00000551111 RUFY4Q6ZNE9 571 aa13.32□□□□□ -0.28
PRPF40B-212ENST00000551111 IL27Q8NEV9 243 aa13.32□□□□□ -0.28
PRPF40B-212ENST00000551111 SMARCC2Q8TAQ2 1214 aa13.32□□□□□ -0.28
PRPF40B-212ENST00000551111 LMBR1Q8WVP7 490 aa13.32□□□□□ -0.28
PRPF40B-212ENST00000551111 RRP36Q96EU6 259 aaKnown RBP13.32□□□□□ -0.28
PRPF40B-212ENST00000551111 TGS1Q96RS0 853 aaKnown RBP13.32□□□□□ -0.28
PRPF40B-212ENST00000551111 USP26Q9BXU7 913 aa13.32□□□□□ -0.28
PRPF40B-212ENST00000551111 EPHX3Q9H6B9 360 aa13.32□□□□□ -0.28
PRPF40B-212ENST00000551111 CD320Q9NPF0 282 aa13.32□□□□□ -0.28
PRPF40B-212ENST00000551111 PKD2L1Q9P0L9 805 aa13.32□□□□□ -0.28
PRPF40B-212ENST00000551111 MYH9P35579 1960 aaKnown RBP13.31□□□□□ -0.28
PRPF40B-212ENST00000551111 GSTTP1A0A1W2PQM5 241 aa13.31□□□□□ -0.28
PRPF40B-212ENST00000551111 PIK3CDO00329 1044 aa13.31□□□□□ -0.28
PRPF40B-212ENST00000551111 FIBPO43427 364 aa13.31□□□□□ -0.28
PRPF40B-212ENST00000551111 DDAH1O94760 285 aa13.31□□□□□ -0.28
PRPF40B-212ENST00000551111 CHRNA1P02708 482 aa13.31□□□□□ -0.28
PRPF40B-212ENST00000551111 KCNA2P16389 499 aa13.31□□□□□ -0.28
PRPF40B-212ENST00000551111 ITGB5P18084 799 aa13.31□□□□□ -0.28
PRPF40B-212ENST00000551111 HTRA4P83105 476 aaPredicted RBP13.31□□□□□ -0.28
PRPF40B-212ENST00000551111 NECTIN1Q15223 517 aa13.31□□□□□ -0.28
PRPF40B-212ENST00000551111 GNPTABQ3T906 1256 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms