RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 CCDC84Q86UT8 332 aaPredicted RBP16.64■□□□□ 0.25
CHFR-223ENST00000544268 DAGLBQ8NCG7 672 aa16.64■□□□□ 0.25
CHFR-223ENST00000544268 RNF217Q8TC41 542 aa16.64■□□□□ 0.25
CHFR-223ENST00000544268 GMCL1Q96IK5 515 aa16.64■□□□□ 0.25
CHFR-223ENST00000544268 NUDT12Q9BQG2 462 aa16.64■□□□□ 0.25
CHFR-223ENST00000544268 ARHGEF10LQ9HCE6 1279 aa16.64■□□□□ 0.25
CHFR-223ENST00000544268 L1RE1Q9UN81 338 aa16.64■□□□□ 0.25
CHFR-223ENST00000544268 RASSF10A6NK89 507 aa16.63■□□□□ 0.25
CHFR-223ENST00000544268 PPP1R11O60927 126 aaPredicted RBP16.63■□□□□ 0.25
CHFR-223ENST00000544268 TDP2O95551 362 aa16.63■□□□□ 0.25
CHFR-223ENST00000544268 OR52Z1P0C646 297 aa16.63■□□□□ 0.25
CHFR-223ENST00000544268 KIAA1755Q5JYT7 1200 aa16.63■□□□□ 0.25
CHFR-223ENST00000544268 ANKRD40Q6AI12 368 aa16.63■□□□□ 0.25
CHFR-223ENST00000544268 GALNT17Q6IS24 598 aa16.63■□□□□ 0.25
CHFR-223ENST00000544268 TTI2Q6NXR4 508 aa16.63■□□□□ 0.25
CHFR-223ENST00000544268 GLIS3Q8NEA6 775 aa16.63■□□□□ 0.25
CHFR-223ENST00000544268 FAM71BQ8TC56 605 aa16.63■□□□□ 0.25
CHFR-223ENST00000544268 FAM107BQ9H098 131 aa16.63■□□□□ 0.25
CHFR-223ENST00000544268 PNMA6FA0A0J9YX94 578 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 POTEMA6NI47 508 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 KIF1CO43896 1103 aaKnown RBP16.62■□□□□ 0.25
CHFR-223ENST00000544268 UBE2SQ16763 222 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 DNAJC21Q5F1R6 531 aaKnown RBP16.62■□□□□ 0.25
CHFR-223ENST00000544268 PRAMEF18Q5VWM3 479 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 ITIH6Q6UXX5 1313 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 MB21D1Q8N884 522 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 MTMR8Q96EF0 704 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 TRIM9Q9C026 710 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 RMND1Q9NWS8 449 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 TMX2Q9Y320 296 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 ENC1O14682 589 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 N4BP1O75113 896 aaKnown RBP16.62■□□□□ 0.25
CHFR-223ENST00000544268 TUBB4BP68371 445 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 ASIC1P78348 528 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 PDE4DQ08499 809 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 NONOQ15233 471 aaKnown RBP eCLIP16.62■□□□□ 0.25
CHFR-223ENST00000544268 C9orf131Q5VYM1 1079 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 WDR59Q6PJI9 974 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 GIMAP8Q8ND71 665 aaPredicted RBP16.62■□□□□ 0.25
CHFR-223ENST00000544268 GLIS2Q9BZE0 524 aaPredicted RBP16.62■□□□□ 0.25
CHFR-223ENST00000544268 CCSER1Q9C0I3 900 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 SLC39A2Q9NP94 309 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 GGA3Q9NZ52 723 aa16.62■□□□□ 0.25
CHFR-223ENST00000544268 ZBTB5O15062 677 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 KIF5CO60282 957 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 RHOBTB3O94955 611 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 ASNSP08243 561 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 HSP90B2PQ58FF3 399 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 DYMQ7RTS9 669 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 SRGAP1Q7Z6B7 1085 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 MSANTD4Q8NCY6 345 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 ZNF507Q8TCN5 953 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 NAA15Q9BXJ9 866 aaKnown RBP16.61■□□□□ 0.25
CHFR-223ENST00000544268 C6orf50Q9HD87 102 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 HDAC6Q9UBN7 1215 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 SYNPO2Q9UMS6 1093 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 GUCA1BQ9UMX6 200 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 BMP3P12645 472 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 CHMP4BP1P59074 171 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 MAP2K1Q02750 393 aaPredicted RBP16.61■□□□□ 0.25
CHFR-223ENST00000544268 ZYXQ15942 572 aaKnown RBP16.61■□□□□ 0.25
CHFR-223ENST00000544268 NEK8Q86SG6 692 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 APOBEC3FQ8IUX4 373 aaKnown RBP16.61■□□□□ 0.25
CHFR-223ENST00000544268 CSGALNACT2Q8N6G5 542 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 KIAA0895Q8NCT3 520 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 ANKZF1Q9H8Y5 726 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 SUGCTQ9HAC7 445 aa16.61■□□□□ 0.25
CHFR-223ENST00000544268 hCG_1984214I3L0E3 225 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 FECHP22830 423 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 GNA11P29992 359 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 MAP2K2P36507 400 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 NCAPH2Q6IBW4 605 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 KCNK18Q7Z418 384 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 RPAINQ86UA6 219 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 ZNF713Q8N859 430 aaPredicted RBP16.6■□□□□ 0.25
CHFR-223ENST00000544268 ANKRD20A12PQ8NF67 263 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 PNKPQ96T60 521 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 ATAD5Q96QE3 1844 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 RCCD1A6NED2 376 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 LGALS16A8MUM7 142 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 ANKRD65E5RJM6 399 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 SNAP25P60880 206 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 IKQ13123 557 aaPredicted RBP16.6■□□□□ 0.25
CHFR-223ENST00000544268 QRICH1Q2TAL8 776 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 GOPCQ9HD26 462 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 MED4Q9NPJ6 270 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 DUSP10Q9Y6W6 482 aa16.6■□□□□ 0.25
CHFR-223ENST00000544268 ESYT2A0FGR8 921 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 ECM1Q16610 540 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 CYP26C1Q6V0L0 522 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 TMTC1Q8IUR5 882 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 REXO1Q8N1G1 1221 aaKnown RBP16.59■□□□□ 0.25
CHFR-223ENST00000544268 MICALL1Q8N3F8 863 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 TUBGCP2Q9BSJ2 902 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 POLR2AP24928 1970 aaKnown RBP16.59■□□□□ 0.25
CHFR-223ENST00000544268 PSMA7O14818 248 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 RHOXF2BP0C7M4 288 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 HERVK_113P62684 666 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 GRB10Q13322 594 aa16.59■□□□□ 0.25
CHFR-223ENST00000544268 KCNB1Q14721 858 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms