RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 RGS20O76081 388 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 MBTPS1Q14703 1052 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 MFSD10Q14728 455 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 PTPROQ16827 1216 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 IL31RAQ8NI17 732 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 NEK9Q8TD19 979 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 WNT8BQ93098 351 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 PDCD2LQ9BRP1 358 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 LSG1Q9H089 658 aaKnown RBP13.74□□□□□ -0.21
GABPB1-206ENST00000543881 MICAL3Q7RTP6 2002 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 HAS3O00219 553 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 DCXO43602 365 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 AMHP03971 560 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 HTRA4P83105 476 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-206ENST00000543881 ZNF200P98182 395 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-206ENST00000543881 NHLH1Q02575 133 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 KIAA0753Q2KHM9 967 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 MYOCDQ8IZQ8 938 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 ZFP91Q96JP5 570 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-206ENST00000543881 LY9Q9HBG7 655 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 MAP3K20Q9NYL2 800 aaKnown RBP13.74□□□□□ -0.21
GABPB1-206ENST00000543881 MYH7BA7E2Y1 1941 aa13.74□□□□□ -0.21
GABPB1-206ENST00000543881 PNMA6FA0A0J9YX94 578 aa13.73□□□□□ -0.21
GABPB1-206ENST00000543881 POTEB3A0JP26 581 aa13.73□□□□□ -0.21
GABPB1-206ENST00000543881 F2P00734 622 aa13.73□□□□□ -0.21
GABPB1-206ENST00000543881 ZNF286BP0CG31 522 aa13.73□□□□□ -0.21
GABPB1-206ENST00000543881 MYCLP12524 364 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-206ENST00000543881 MKRN4PQ13434 485 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-206ENST00000543881 SART3Q15020 963 aaKnown RBP13.73□□□□□ -0.21
GABPB1-206ENST00000543881 PGM5Q15124 567 aa13.73□□□□□ -0.21
GABPB1-206ENST00000543881 EPC2Q52LR7 807 aa13.73□□□□□ -0.21
GABPB1-206ENST00000543881 TIGD5Q53EQ6 642 aa13.73□□□□□ -0.21
GABPB1-206ENST00000543881 POTEBQ6S5H4 581 aa13.73□□□□□ -0.21
GABPB1-206ENST00000543881 CATIPQ7Z7H3 387 aa13.73□□□□□ -0.21
GABPB1-206ENST00000543881 VSIG10LQ86VR7 867 aa13.73□□□□□ -0.21
GABPB1-206ENST00000543881 BANK1Q8NDB2 785 aa13.73□□□□□ -0.21
GABPB1-206ENST00000543881 DBF4BQ8NFT6 615 aa13.73□□□□□ -0.21
GABPB1-206ENST00000543881 PPTC7Q8NI37 304 aa13.73□□□□□ -0.21
GABPB1-206ENST00000543881 SP7Q8TDD2 431 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-206ENST00000543881 EMID1Q96A84 441 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-206ENST00000543881 ESYT1Q9BSJ8 1104 aa13.73□□□□□ -0.21
GABPB1-206ENST00000543881 MYL10Q9BUA6 226 aa13.73□□□□□ -0.21
GABPB1-206ENST00000543881 MRVI1Q9Y6F6 885 aa13.73□□□□□ -0.21
GABPB1-206ENST00000543881 EMSYQ7Z589 1322 aa13.72□□□□□ -0.21
GABPB1-206ENST00000543881 PRC1O43663 620 aa13.72□□□□□ -0.21
GABPB1-206ENST00000543881 LAMC2Q13753 1193 aa13.72□□□□□ -0.21
GABPB1-206ENST00000543881 EP400NLQ6ZTU2 488 aa13.72□□□□□ -0.21
GABPB1-206ENST00000543881 DHX37Q8IY37 1157 aaKnown RBP13.72□□□□□ -0.21
GABPB1-206ENST00000543881 SAMD3Q8N6K7 520 aa13.72□□□□□ -0.21
GABPB1-206ENST00000543881 PIBF1Q8WXW3 757 aa13.72□□□□□ -0.21
GABPB1-206ENST00000543881 GPKOWQ92917 476 aaPredicted RBP eCLIP13.72□□□□□ -0.21
GABPB1-206ENST00000543881 FBXL18Q96ME1 805 aa13.72□□□□□ -0.21
GABPB1-206ENST00000543881 SAMD11Q96NU1 681 aa13.72□□□□□ -0.21
GABPB1-206ENST00000543881 KCNH6Q9H252 994 aa13.72□□□□□ -0.21
GABPB1-206ENST00000543881 RSPH10B2B2RC85 870 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 H3BNC9 293 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 GCOM1H8Y6P7 765 aaPredicted RBP13.71□□□□□ -0.21
GABPB1-206ENST00000543881 SLC27A2O14975 620 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 SORBS3O60504 671 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 RSPH10BP0C881 870 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 POLR2MP0CAP2 368 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 THPOP40225 353 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 SP2Q02086 613 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 ZP2Q05996 745 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 GPM6BQ13491 265 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 HIC1Q14526 733 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 NECTIN1Q15223 517 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 TCEAL5Q5H9L2 206 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 PPP4R3CPQ6ZMV5 832 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 FCHSD1Q86WN1 690 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 ZNF654Q8IZM8 581 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 PABPC5Q96DU9 382 aaKnown RBP13.71□□□□□ -0.21
GABPB1-206ENST00000543881 YME1L1Q96TA2 773 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 PRKAG3Q9UGI9 489 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 FAM50BQ9Y247 325 aa13.71□□□□□ -0.21
GABPB1-206ENST00000543881 SH2B2O14492 632 aaPredicted RBP13.7□□□□□ -0.22
GABPB1-206ENST00000543881 HSDL1Q3SXM5 330 aa13.7□□□□□ -0.22
GABPB1-206ENST00000543881 PLEKHG4Q58EX7 1191 aa13.7□□□□□ -0.22
GABPB1-206ENST00000543881 MYSM1Q5VVJ2 828 aa13.7□□□□□ -0.22
GABPB1-206ENST00000543881 CREB3L3Q68CJ9 461 aa13.7□□□□□ -0.22
GABPB1-206ENST00000543881 SERINC5Q86VE9 423 aa13.7□□□□□ -0.22
GABPB1-206ENST00000543881 MAP3K14Q99558 947 aa13.7□□□□□ -0.22
GABPB1-206ENST00000543881 SPZ1Q9BXG8 430 aa13.7□□□□□ -0.22
GABPB1-206ENST00000543881 BCAS3Q9H6U6 928 aa13.7□□□□□ -0.22
GABPB1-206ENST00000543881 NLRC5Q86WI3 1866 aa13.7□□□□□ -0.22
GABPB1-206ENST00000543881 PPFIA4O75335 1185 aa13.69□□□□□ -0.22
GABPB1-206ENST00000543881 DDAH1O94760 285 aa13.69□□□□□ -0.22
GABPB1-206ENST00000543881 PLEKHA8P1O95397 391 aa13.69□□□□□ -0.22
GABPB1-206ENST00000543881 GGPS1O95749 300 aa13.69□□□□□ -0.22
GABPB1-206ENST00000543881 HOXD8P13378 290 aaPredicted RBP13.69□□□□□ -0.22
GABPB1-206ENST00000543881 RXRAP19793 462 aa13.69□□□□□ -0.22
GABPB1-206ENST00000543881 MRPS9P82933 396 aaKnown RBP13.69□□□□□ -0.22
GABPB1-206ENST00000543881 TRAF1Q13077 416 aa13.69□□□□□ -0.22
GABPB1-206ENST00000543881 COL19A1Q14993 1142 aa13.69□□□□□ -0.22
GABPB1-206ENST00000543881 CELF3Q5SZQ8 465 aaKnown RBP13.69□□□□□ -0.22
GABPB1-206ENST00000543881 CASC1Q6TDU7 716 aa13.69□□□□□ -0.22
GABPB1-206ENST00000543881 ADHFE1Q8IWW8 467 aa13.69□□□□□ -0.22
GABPB1-206ENST00000543881 TMEM192Q8IY95 271 aa13.69□□□□□ -0.22
GABPB1-206ENST00000543881 CMTR1Q8N1G2 835 aaKnown RBP13.69□□□□□ -0.22
GABPB1-206ENST00000543881 SRBD1Q8N5C6 995 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms