RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 SMCO2A6NFE2 343 aa11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 SPDYE3A6NKU9 549 aa11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PRPF3O43395 683 aaKnown RBP11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 FOSP01100 380 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PDIA3P30101 505 aaKnown RBP11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 EPHB4P54760 987 aa11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 CHMP4BP1P59074 171 aa11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 UBE2SQ16763 222 aa11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 KAT2BQ92831 832 aa11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 SENP7Q9BQF6 1050 aa11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 NOC4LQ9BVI4 516 aaKnown RBP11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 HIPK3Q9H422 1215 aa11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 EHMT1Q9H9B1 1298 aa11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 TRMT13Q9NUP7 481 aaKnown RBP11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 BARHL2Q9NY43 387 aa11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 MYH9P35579 1960 aaKnown RBP11.16□□□□□ -0.62
TNFRSF1A-214ENST00000543048 LAMA3Q16787 3333 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 STXBP3O00186 592 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 MAFGO15525 162 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 FIBPO43427 364 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 SORBS3O60504 671 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 HOXD8P13378 290 aaPredicted RBP11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 SCG2P13521 617 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 CSF2RAP15509 400 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 UBA1P22314 1058 aaKnown RBP11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PSEN2P49810 448 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 ADCY7P51828 1080 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 AKAP17AQ02040 695 aaKnown RBP11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 SEMA3FQ13275 785 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PFKFB3Q16875 520 aaPredicted RBP11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 HSDL1Q3SXM5 330 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 C16orf59Q7L2K0 433 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 CYFIP1Q7L576 1253 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 SESTD1Q86VW0 696 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 RPUSD2Q8IZ73 545 aaKnown RBP11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 GIMAP8Q8ND71 665 aaPredicted RBP11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PPP1R13LQ8WUF5 828 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 ZNF274Q96GC6 653 aaPredicted RBP11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 CDHR1Q96JP9 859 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 KATNAL1Q9BW62 490 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 BCAS3Q9H6U6 928 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 IL23AQ9NPF7 189 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PDRG1Q9NUG6 133 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 TET1Q8NFU7 2136 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 WDR81Q562E7 1941 aa11.15□□□□□ -0.62
TNFRSF1A-214ENST00000543048 NID2Q14112 1375 aa11.15□□□□□ -0.63
TNFRSF1A-214ENST00000543048 HAS3O00219 553 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 CYP2C9P11712 490 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 CCL23P55773 120 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 CCT2P78371 535 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 TOB2Q14106 344 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 MFSD10Q14728 455 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 NTRK3Q16288 839 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 PTGISQ16647 500 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 KIAA0753Q2KHM9 967 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 TMEM240Q5SV17 173 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 TYW1BQ6NUM6 668 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 METTL7BQ6UX53 244 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 C7orf31Q8N865 590 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 RETREG2Q8NC44 543 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 CCDC12Q8WUD4 166 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 GPRASP2Q96D09 838 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 RNPC3Q96LT9 517 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 ALG1Q9BT22 464 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 JADE2Q9NQC1 790 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 HDAC6Q9UBN7 1215 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 NOD1Q9Y239 953 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 UBIAD1Q9Y5Z9 338 aa11.14□□□□□ -0.63
TNFRSF1A-214ENST00000543048 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 NOP56O00567 594 aaKnown RBP11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 F2P00734 622 aa11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 FGBP02675 491 aa11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 ZNF286BP0CG31 522 aa11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 ACRP10323 421 aa11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 IFNAR1P17181 557 aa11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 ITGB5P18084 799 aa11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 ANAPC15P60006 121 aa11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 BFSP2Q13515 415 aa11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 PKN1Q16512 942 aa11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 MCTP2Q6DN12 878 aa11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 GDF6Q6KF10 455 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 ZNF365Q70YC5 407 aa11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 BBXQ8WY36 941 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 PHKBQ93100 1093 aa11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 GPR20Q99678 358 aa11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.13□□□□□ -0.634e-6■■■■□ 19.4
TNFRSF1A-214ENST00000543048 MXRA8Q9BRK3 442 aa11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 C16orf70Q9BSU1 422 aa11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 RNF26Q9BY78 433 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 UPF3BQ9BZI7 483 aaKnown RBP11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 C6orf50Q9HD87 102 aa11.13□□□□□ -0.63
TNFRSF1A-214ENST00000543048 GBF1Q92538 1859 aa11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 UMODL1Q5DID0 1318 aa11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 ESYT2A0FGR8 921 aa11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 H3BRB1 525 aa11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 GTPBP6O43824 516 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 ATP9AO75110 1047 aa11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 GNA11P29992 359 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms