RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 HERVK_113Q902F9 699 aa11.08□□□□□ -0.64
SSBP3-215ENST00000533946 GJA10Q969M2 543 aa11.08□□□□□ -0.64
SSBP3-215ENST00000533946 LZTS2Q9BRK4 669 aa11.08□□□□□ -0.64
SSBP3-215ENST00000533946 AGXT2Q9BYV1 514 aa11.08□□□□□ -0.64
SSBP3-215ENST00000533946 NKX2-4Q9H2Z4 354 aa11.08□□□□□ -0.64
SSBP3-215ENST00000533946 PRDM6Q9NQX0 595 aa11.08□□□□□ -0.64
SSBP3-215ENST00000533946 GJB4Q9NTQ9 266 aa11.08□□□□□ -0.64
SSBP3-215ENST00000533946 PPP4R2Q9NY27 417 aa11.08□□□□□ -0.64
SSBP3-215ENST00000533946 SEC63Q9UGP8 760 aaKnown RBP11.08□□□□□ -0.64
SSBP3-215ENST00000533946 GTF2IRD1Q9UHL9 959 aa11.08□□□□□ -0.64
SSBP3-215ENST00000533946 UBIAD1Q9Y5Z9 338 aa11.08□□□□□ -0.64
SSBP3-215ENST00000533946 SMCO2A6NFE2 343 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 EPOPA6NHQ4 379 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 CALM1P0DP23 149 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 CALM2P0DP24 149 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 CALM3P0DP25 149 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 CKBP12277 381 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 GNAQP50148 359 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 NAPAP54920 295 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 STK3Q13188 491 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 ITGB3BPQ13352 177 aaPredicted RBP11.07□□□□□ -0.64
SSBP3-215ENST00000533946 ADGRE1Q14246 886 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 ZNF618Q5T7W0 954 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 GPR153Q6NV75 609 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 BLOC1S2Q6QNY1 142 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 RUFY4Q6ZNE9 571 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 MPHOSPH6Q99547 160 aaKnown RBP11.07□□□□□ -0.64
SSBP3-215ENST00000533946 CERS4Q9HA82 394 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 MLXIPQ9HAP2 919 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 ZSWIM6Q9HCJ5 1215 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 RIC8AQ9NPQ8 531 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 SETD4Q9NVD3 440 aa11.07□□□□□ -0.64
SSBP3-215ENST00000533946 MAP3K20Q9NYL2 800 aaKnown RBP11.07□□□□□ -0.64
SSBP3-215ENST00000533946 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.06□□□□□ -0.64
SSBP3-215ENST00000533946 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.06□□□□□ -0.64
SSBP3-215ENST00000533946 LCHNA4D1U4 455 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 B4DLN1 442 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 FAM86B1E9PN63 330 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 H3BRB1 525 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 KPNA6O60684 536 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 PPFIA4O75335 1185 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 FAM86B2P0C5J1 330 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 SMIM10L2AP0DMW4 78 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 SMIM10L2BP0DMW5 78 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 MARK3P27448 753 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 CLK2P49760 499 aaKnown RBP11.06□□□□□ -0.64
SSBP3-215ENST00000533946 METAP2P50579 478 aaKnown RBP eCLIP11.06□□□□□ -0.641e-6■■■□□ 15.4
SSBP3-215ENST00000533946 MRPL12P52815 198 aaKnown RBP11.06□□□□□ -0.64
SSBP3-215ENST00000533946 DEFB103AP81534 67 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 ZNF697Q5TEC3 545 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 KRT40Q6A162 431 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 SESTD1Q86VW0 696 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 TRAPPC12Q8WVT3 735 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 ANO3Q9BYT9 981 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 MAF1Q9H063 256 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 PRDM12Q9H4Q4 367 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 TUT1Q9H6E5 874 aaKnown RBP11.06□□□□□ -0.64
SSBP3-215ENST00000533946 BARHL2Q9NY43 387 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 STXBP5LQ9Y2K9 1186 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 CUL9Q8IWT3 2517 aa11.06□□□□□ -0.64
SSBP3-215ENST00000533946 ZBBXA8MT70 800 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 DDX39AO00148 427 aaKnown RBP11.05□□□□□ -0.64
SSBP3-215ENST00000533946 FIBPO43427 364 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 LARGE1O95461 756 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 CCNE2O96020 404 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 CTSHP09668 335 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 HOXC8P31273 242 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 KRT32Q14532 448 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 PFKFB3Q16875 520 aaPredicted RBP11.05□□□□□ -0.64
SSBP3-215ENST00000533946 BRDTQ58F21 947 aaPredicted RBP11.05□□□□□ -0.64
SSBP3-215ENST00000533946 METTL7BQ6UX53 244 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 SYNE3Q6ZMZ3 975 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.05□□□□□ -0.64
SSBP3-215ENST00000533946 RUFY3Q7L099 469 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 C7orf31Q8N865 590 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 CRYGNQ8WXF5 182 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 CUL5Q93034 780 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 TIFAQ96CG3 184 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 SLC26A6Q9BXS9 759 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 ZNF576Q9H609 170 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 JADE2Q9NQC1 790 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 KCNH7Q9NS40 1196 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 VPS54Q9P1Q0 977 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 LOXHD1Q8IVV2 1947 aa11.05□□□□□ -0.64
SSBP3-215ENST00000533946 NEFLP07196 543 aa11.04□□□□□ -0.64
SSBP3-215ENST00000533946 TGFB3P10600 412 aa11.04□□□□□ -0.64
SSBP3-215ENST00000533946 SCG2P13521 617 aa11.04□□□□□ -0.64
SSBP3-215ENST00000533946 TCF7P36402 384 aaPredicted RBP11.04□□□□□ -0.64
SSBP3-215ENST00000533946 ADCY7P51828 1080 aa11.04□□□□□ -0.64
SSBP3-215ENST00000533946 EVCP57679 992 aa11.04□□□□□ -0.64
SSBP3-215ENST00000533946 ADAM17P78536 824 aa11.04□□□□□ -0.64
SSBP3-215ENST00000533946 FGD1P98174 961 aa11.04□□□□□ -0.64
SSBP3-215ENST00000533946 PTPN11Q06124 597 aaPredicted RBP11.04□□□□□ -0.64
SSBP3-215ENST00000533946 NPY5RQ15761 445 aa11.04□□□□□ -0.64
SSBP3-215ENST00000533946 MARCH8Q5T0T0 291 aa11.04□□□□□ -0.64
SSBP3-215ENST00000533946 PSRC1Q6PGN9 363 aaPredicted RBP11.04□□□□□ -0.64
SSBP3-215ENST00000533946 LRRC8DQ7L1W4 858 aa11.04□□□□□ -0.64
SSBP3-215ENST00000533946 SERINC5Q86VE9 423 aa11.04□□□□□ -0.64
SSBP3-215ENST00000533946 SAMD3Q8N6K7 520 aa11.04□□□□□ -0.64
SSBP3-215ENST00000533946 LMBR1Q8WVP7 490 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms