RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 ATP6V0A1Q93050 837 aa26.39■■□□□ 1.82
PKP3-210ENST00000533249 RAD9AQ99638 391 aa26.39■■□□□ 1.82
PKP3-210ENST00000533249 RBM8AQ9Y5S9 174 aaKnown RBP26.39■■□□□ 1.82
PKP3-210ENST00000533249 DOCK5Q9H7D0 1870 aa26.38■■□□□ 1.81
PKP3-210ENST00000533249 RSPH10B2B2RC85 870 aa26.38■■□□□ 1.81
PKP3-210ENST00000533249 RSPH10BP0C881 870 aa26.38■■□□□ 1.81
PKP3-210ENST00000533249 SMIM10L2AP0DMW4 78 aa26.38■■□□□ 1.81
PKP3-210ENST00000533249 SMIM10L2BP0DMW5 78 aa26.38■■□□□ 1.81
PKP3-210ENST00000533249 CYFIP1Q7L576 1253 aa26.38■■□□□ 1.81
PKP3-210ENST00000533249 DBF4BQ8NFT6 615 aa26.38■■□□□ 1.81
PKP3-210ENST00000533249 CTCFLQ8NI51 663 aaPredicted RBP26.38■■□□□ 1.81
PKP3-210ENST00000533249 MAP4K1Q92918 833 aa26.38■■□□□ 1.81
PKP3-210ENST00000533249 INPP4AQ96PE3 977 aaPredicted RBP26.38■■□□□ 1.81
PKP3-210ENST00000533249 FRMPD4Q14CM0 1322 aa26.38■■□□□ 1.81
PKP3-210ENST00000533249 EMSYQ7Z589 1322 aa26.38■■□□□ 1.81
PKP3-210ENST00000533249 ICAM3P32942 547 aa26.37■■□□□ 1.81
PKP3-210ENST00000533249 NEDD9Q14511 834 aa26.37■■□□□ 1.81
PKP3-210ENST00000533249 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.37■■□□□ 1.81
PKP3-210ENST00000533249 ZNF654Q8IZM8 581 aa26.37■■□□□ 1.81
PKP3-210ENST00000533249 SMARCC2Q8TAQ2 1214 aa26.37■■□□□ 1.81
PKP3-210ENST00000533249 RRP36Q96EU6 259 aaKnown RBP26.37■■□□□ 1.81
PKP3-210ENST00000533249 COG5Q9UP83 839 aa26.37■■□□□ 1.81
PKP3-210ENST00000533249 LINC01553A4QN01 128 aa26.36■■□□□ 1.81
PKP3-210ENST00000533249 SPATA31C2B4DYI2 1134 aa26.36■■□□□ 1.81
PKP3-210ENST00000533249 TREHO43280 583 aa26.36■■□□□ 1.81
PKP3-210ENST00000533249 STAM2O75886 525 aa26.36■■□□□ 1.81
PKP3-210ENST00000533249 SEMA3FQ13275 785 aa26.36■■□□□ 1.81
PKP3-210ENST00000533249 USP17L6PQ6QN14 398 aa26.36■■□□□ 1.81
PKP3-210ENST00000533249 METTL7BQ6UX53 244 aa26.36■■□□□ 1.81
PKP3-210ENST00000533249 CUL5Q93034 780 aa26.36■■□□□ 1.81
PKP3-210ENST00000533249 TGS1Q96RS0 853 aaKnown RBP26.36■■□□□ 1.81
PKP3-210ENST00000533249 SPZ1Q9BXG8 430 aa26.36■■□□□ 1.81
PKP3-210ENST00000533249 RNPEPQ9H4A4 650 aa26.36■■□□□ 1.81
PKP3-210ENST00000533249 LY9Q9HBG7 655 aa26.36■■□□□ 1.81
PKP3-210ENST00000533249 FIBPO43427 364 aa26.35■■□□□ 1.81
PKP3-210ENST00000533249 DDAH1O94760 285 aa26.35■■□□□ 1.81
PKP3-210ENST00000533249 KIF5BP33176 963 aa26.35■■□□□ 1.81
PKP3-210ENST00000533249 SP4Q02446 784 aa26.35■■□□□ 1.81
PKP3-210ENST00000533249 CASC1Q6TDU7 716 aa26.35■■□□□ 1.81
PKP3-210ENST00000533249 TRIM50Q86XT4 487 aa26.35■■□□□ 1.81
PKP3-210ENST00000533249 HLA-CQ95604 372 aa26.35■■□□□ 1.81
PKP3-210ENST00000533249 USP26Q9BXU7 913 aa26.35■■□□□ 1.81
PKP3-210ENST00000533249 SEC63Q9UGP8 760 aaKnown RBP26.35■■□□□ 1.81
PKP3-210ENST00000533249 BDP1A6H8Y1 2624 aa26.34■■□□□ 1.81
PKP3-210ENST00000533249 PRC1O43663 620 aa26.34■■□□□ 1.81
PKP3-210ENST00000533249 AMHP03971 560 aa26.34■■□□□ 1.81
PKP3-210ENST00000533249 CTSHP09668 335 aa26.34■■□□□ 1.81
PKP3-210ENST00000533249 COL9A1P20849 921 aa26.34■■□□□ 1.81
PKP3-210ENST00000533249 HOXC8P31273 242 aa26.34■■□□□ 1.81
PKP3-210ENST00000533249 ERVK-21P61565 698 aa26.34■■□□□ 1.81
PKP3-210ENST00000533249 UTP14CQ5TAP6 766 aaKnown RBP26.34■■□□□ 1.81
PKP3-210ENST00000533249 MYOCDQ8IZQ8 938 aa26.34■■□□□ 1.81
PKP3-210ENST00000533249 MAP3K14Q99558 947 aa26.34■■□□□ 1.81
PKP3-210ENST00000533249 GPR20Q99678 358 aa26.34■■□□□ 1.81
PKP3-210ENST00000533249 SUGCTQ9HAC7 445 aa26.34■■□□□ 1.81
PKP3-210ENST00000533249 SETD4Q9NVD3 440 aa26.34■■□□□ 1.81
PKP3-210ENST00000533249 TELO2Q9Y4R8 837 aa26.34■■□□□ 1.81
PKP3-210ENST00000533249 MICAL3Q7RTP6 2002 aa26.34■■□□□ 1.81
PKP3-210ENST00000533249 XIRP2A4UGR9 3374 aa26.33■■□□□ 1.81
PKP3-210ENST00000533249 PLEKHG4Q58EX7 1191 aa26.33■■□□□ 1.81
PKP3-210ENST00000533249 NFXL1Q6ZNB6 911 aa26.33■■□□□ 1.81
PKP3-210ENST00000533249 SIP14410 1827 aa26.32■■□□□ 1.8
PKP3-210ENST00000533249 PLEKHA8P1O95397 391 aa26.32■■□□□ 1.8
PKP3-210ENST00000533249 PCNX4Q63HM2 1172 aa26.32■■□□□ 1.8
PKP3-210ENST00000533249 LMCD1Q9NZU5 365 aa26.32■■□□□ 1.8
PKP3-210ENST00000533249 INSL6Q9Y581 213 aa26.32■■□□□ 1.8
PKP3-210ENST00000533249 MEIS2O14770 477 aa26.31■■□□□ 1.8
PKP3-210ENST00000533249 RXRAP19793 462 aa26.31■■□□□ 1.8
PKP3-210ENST00000533249 CMTR1Q8N1G2 835 aaKnown RBP26.31■■□□□ 1.8
PKP3-210ENST00000533249 SEPT8Q92599 483 aa26.31■■□□□ 1.8
PKP3-210ENST00000533249 LZTS2Q9BRK4 669 aa26.31■■□□□ 1.8
PKP3-210ENST00000533249 OSBPL7Q9BZF2 842 aa26.31■■□□□ 1.8
PKP3-210ENST00000533249 ZNF215Q9UL58 517 aaPredicted RBP26.31■■□□□ 1.8
PKP3-210ENST00000533249 CCDC69A6NI79 296 aa26.3■■□□□ 1.8
PKP3-210ENST00000533249 GNAT1P11488 350 aa26.3■■□□□ 1.8
PKP3-210ENST00000533249 SMARCA1P28370 1054 aa26.3■■□□□ 1.8
PKP3-210ENST00000533249 GNAQP50148 359 aa26.3■■□□□ 1.8
PKP3-210ENST00000533249 MKRN4PQ13434 485 aaPredicted RBP26.3■■□□□ 1.8
PKP3-210ENST00000533249 XRRA1Q6P2D8 792 aa26.3■■□□□ 1.8
PKP3-210ENST00000533249 NLRX1Q86UT6 975 aa26.3■■□□□ 1.8
PKP3-210ENST00000533249 SRBD1Q8N5C6 995 aaKnown RBP26.3■■□□□ 1.8
PKP3-210ENST00000533249 C17orf80Q9BSJ5 609 aa26.3■■□□□ 1.8
PKP3-210ENST00000533249 PIK3CDO00329 1044 aa26.29■■□□□ 1.8
PKP3-210ENST00000533249 SH2B2O14492 632 aaPredicted RBP26.29■■□□□ 1.8
PKP3-210ENST00000533249 MCM5P33992 734 aa26.29■■□□□ 1.8
PKP3-210ENST00000533249 ARHGAP4P98171 946 aa26.29■■□□□ 1.8
PKP3-210ENST00000533249 COL9A3Q14050 684 aaPredicted RBP26.29■■□□□ 1.8
PKP3-210ENST00000533249 ERICH6BQ5W0A0 696 aa26.29■■□□□ 1.8
PKP3-210ENST00000533249 RAB11FIP4Q86YS3 637 aa26.29■■□□□ 1.8
PKP3-210ENST00000533249 SENP7Q9BQF6 1050 aa26.29■■□□□ 1.8
PKP3-210ENST00000533249 MTA3Q9BTC8 594 aa26.29■■□□□ 1.8
PKP3-210ENST00000533249 CAND2O75155 1236 aa26.28■■□□□ 1.8
PKP3-210ENST00000533249 HTRA4P83105 476 aaPredicted RBP26.28■■□□□ 1.8
PKP3-210ENST00000533249 FBXO22Q8NEZ5 403 aa26.28■■□□□ 1.8
PKP3-210ENST00000533249 LMBR1Q8WVP7 490 aa26.28■■□□□ 1.8
PKP3-210ENST00000533249 TMEM87BQ96K49 555 aa26.28■■□□□ 1.8
PKP3-210ENST00000533249 LSG1Q9H089 658 aaKnown RBP26.28■■□□□ 1.8
PKP3-210ENST00000533249 RAPGEFL1Q9UHV5 662 aa26.28■■□□□ 1.8
PKP3-210ENST00000533249 hCG_1642624A0A1W2PR95 340 aa26.27■■□□□ 1.8
PKP3-210ENST00000533249 UPP2O95045 317 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms