RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 TTC38Q5R3I4 469 aa13.4□□□□□ -0.26
PPFIA1-220ENST00000532024 GJC2Q5T442 439 aaPredicted RBP13.4□□□□□ -0.26
PPFIA1-220ENST00000532024 MYSM1Q5VVJ2 828 aa13.4□□□□□ -0.26
PPFIA1-220ENST00000532024 CYFIP1Q7L576 1253 aa13.4□□□□□ -0.26
PPFIA1-220ENST00000532024 SLFN12Q8IYM2 578 aa13.4□□□□□ -0.26
PPFIA1-220ENST00000532024 PPTC7Q8NI37 304 aa13.4□□□□□ -0.26
PPFIA1-220ENST00000532024 CYP2W1Q8TAV3 490 aa13.4□□□□□ -0.26
PPFIA1-220ENST00000532024 FAM20AQ96MK3 541 aa13.4□□□□□ -0.26
PPFIA1-220ENST00000532024 MBOAT7Q96N66 472 aa13.4□□□□□ -0.26
PPFIA1-220ENST00000532024 RIT2Q99578 217 aa13.4□□□□□ -0.26
PPFIA1-220ENST00000532024 ZSCAN16Q9H4T2 348 aaPredicted RBP13.4□□□□□ -0.26
PPFIA1-220ENST00000532024 JPH1Q9HDC5 661 aaPredicted RBP13.4□□□□□ -0.26
PPFIA1-220ENST00000532024 A6NJR5 290 aa13.39□□□□□ -0.27
PPFIA1-220ENST00000532024 GAS7O60861 476 aa13.39□□□□□ -0.27
PPFIA1-220ENST00000532024 CABYRO75952 493 aa13.39□□□□□ -0.27
PPFIA1-220ENST00000532024 ARP10275 920 aa13.39□□□□□ -0.27
PPFIA1-220ENST00000532024 SOX10P56693 466 aa13.39□□□□□ -0.27
PPFIA1-220ENST00000532024 NKX3-2P78367 333 aa13.39□□□□□ -0.27
PPFIA1-220ENST00000532024 KRT76Q01546 638 aa13.39□□□□□ -0.27
PPFIA1-220ENST00000532024 SEMA3FQ13275 785 aa13.39□□□□□ -0.27
PPFIA1-220ENST00000532024 EARS2Q5JPH6 523 aaKnown RBP13.39□□□□□ -0.27
PPFIA1-220ENST00000532024 LRCH2Q5VUJ6 765 aa13.39□□□□□ -0.27
PPFIA1-220ENST00000532024 FERMT3Q86UX7 667 aa13.39□□□□□ -0.27
PPFIA1-220ENST00000532024 AFG1LQ8WV93 481 aa13.39□□□□□ -0.27
PPFIA1-220ENST00000532024 COPS5Q92905 334 aa13.39□□□□□ -0.27
PPFIA1-220ENST00000532024 SLC9A2Q9UBY0 812 aa13.39□□□□□ -0.27
PPFIA1-220ENST00000532024 TNRC18O15417 2968 aaPredicted RBP13.39□□□□□ -0.27
PPFIA1-220ENST00000532024 CENPFP49454 3210 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 POTEFA5A3E0 1075 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 MSH4O15457 936 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 PPFIA4O75335 1185 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 BMP15O95972 392 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 MMP3P08254 477 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 MCM7P33993 719 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 ACLYP53396 1101 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 SP2Q02086 613 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 SP4Q02446 784 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 CALCRLQ16602 461 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 NECAB2Q7Z6G3 386 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 KLHDC9Q8NEP7 349 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 SLC5A5Q92911 643 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 LENG9Q96B70 501 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 GLT1D1Q96MS3 346 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 TEKT3Q9BXF9 490 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 CEP131Q9UPN4 1083 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 PHF24Q9UPV7 400 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 MTMR6Q9Y217 621 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 ELP1O95163 1332 aa13.38□□□□□ -0.27
PPFIA1-220ENST00000532024 LAD1O00515 517 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 SLC37A4O43826 429 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 SORBS3O60504 671 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 ATP9AO75110 1047 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 ASGR1P07306 291 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 MYL3P08590 195 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 ZSCAN22P10073 491 aaPredicted RBP13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 EN2P19622 333 aaPredicted RBP13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 SFNP31947 248 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 BEX3Q00994 111 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 ITGB3BPQ13352 177 aaPredicted RBP13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 KCNA10Q16322 511 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 TMEM63BQ5T3F8 832 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 ZNF746Q6NUN9 644 aaPredicted RBP13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 POTEDQ86YR6 584 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 SMAP1Q8IYB5 467 aaPredicted RBP13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 ETNPPLQ8TBG4 499 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 SEPT1Q8WYJ6 367 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 VTI1AQ96AJ9 217 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 MTG1Q9BT17 334 aaPredicted RBP13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 KATNAL1Q9BW62 490 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 SEZ6LQ9BYH1 1024 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 C11orf49Q9H6J7 331 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 AZI2Q9H6S1 392 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 KCNMB3Q9NPA1 279 aa13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 ZNF215Q9UL58 517 aaPredicted RBP13.37□□□□□ -0.27
PPFIA1-220ENST00000532024 MYADML2A6NDP7 307 aa13.36□□□□□ -0.27
PPFIA1-220ENST00000532024 WDR64B1ANS9 1081 aa13.36□□□□□ -0.27
PPFIA1-220ENST00000532024 DDX39AO00148 427 aaKnown RBP13.36□□□□□ -0.27
PPFIA1-220ENST00000532024 JAK3P52333 1124 aa13.36□□□□□ -0.27
PPFIA1-220ENST00000532024 RESTQ13127 1097 aa13.36□□□□□ -0.27
PPFIA1-220ENST00000532024 ZNF174Q15697 407 aa13.36□□□□□ -0.27
PPFIA1-220ENST00000532024 TMEM266Q2M3C6 531 aa13.36□□□□□ -0.27
PPFIA1-220ENST00000532024 HSDL1Q3SXM5 330 aa13.36□□□□□ -0.27
PPFIA1-220ENST00000532024 FAM160B1Q5W0V3 765 aa13.36□□□□□ -0.27
PPFIA1-220ENST00000532024 MIS18BP1Q6P0N0 1132 aa13.36□□□□□ -0.27
PPFIA1-220ENST00000532024 RDM1Q8NG50 284 aa13.36□□□□□ -0.27
PPFIA1-220ENST00000532024 ZNF396Q96N95 335 aaPredicted RBP13.36□□□□□ -0.27
PPFIA1-220ENST00000532024 GPR20Q99678 358 aa13.36□□□□□ -0.27
PPFIA1-220ENST00000532024 RAB34Q9BZG1 259 aa13.36□□□□□ -0.27
PPFIA1-220ENST00000532024 SAMM50Q9Y512 469 aa13.36□□□□□ -0.27
PPFIA1-220ENST00000532024 ATP6V1DQ9Y5K8 247 aa13.36□□□□□ -0.27
PPFIA1-220ENST00000532024 A0A1W2PQ45 241 aaPredicted RBP13.35□□□□□ -0.27
PPFIA1-220ENST00000532024 A0A1W2PQY0 241 aa13.35□□□□□ -0.27
PPFIA1-220ENST00000532024 BACH1O14867 736 aa13.35□□□□□ -0.27
PPFIA1-220ENST00000532024 CTAGE5O15320 804 aa13.35□□□□□ -0.27
PPFIA1-220ENST00000532024 EDIL3O43854 480 aa13.35□□□□□ -0.27
PPFIA1-220ENST00000532024 PSMD10O75832 226 aa13.35□□□□□ -0.27
PPFIA1-220ENST00000532024 PSAPP07602 524 aa13.35□□□□□ -0.27
PPFIA1-220ENST00000532024 OR52Z1P0C646 297 aa13.35□□□□□ -0.27
PPFIA1-220ENST00000532024 HOXD8P13378 290 aaPredicted RBP13.35□□□□□ -0.27
PPFIA1-220ENST00000532024 TCF7P36402 384 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms