RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 REXO1Q8N1G1 1221 aaKnown RBP17.22■□□□□ 0.35
USP35-206ENST00000530535 MMGT1Q8N4V1 131 aa17.22■□□□□ 0.35
USP35-206ENST00000530535 MTMR14Q8NCE2 650 aa17.22■□□□□ 0.35
USP35-206ENST00000530535 TRIM58Q8NG06 486 aa17.22■□□□□ 0.35
USP35-206ENST00000530535 CAGE1Q8TC20 777 aa17.22■□□□□ 0.35
USP35-206ENST00000530535 AENQ8WTP8 325 aaKnown RBP17.22■□□□□ 0.35
USP35-206ENST00000530535 CEP95Q96GE4 821 aa17.22■□□□□ 0.35
USP35-206ENST00000530535 IFIH1Q9BYX4 1025 aaKnown RBP17.22■□□□□ 0.35
USP35-206ENST00000530535 JADE2Q9NQC1 790 aa17.22■□□□□ 0.35
USP35-206ENST00000530535 BIN2Q9UBW5 565 aaPredicted RBP17.22■□□□□ 0.35
USP35-206ENST00000530535 STK17AQ9UEE5 414 aa17.22■□□□□ 0.35
USP35-206ENST00000530535 SLC37A4O43826 429 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 IVLP07476 585 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 TXKP42681 527 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 ITIH3Q06033 890 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 MAN2A1Q16706 1144 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 LRRC31Q6UY01 552 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 SV2BQ7L1I2 683 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 GUF1Q8N442 669 aaKnown RBP17.21■□□□□ 0.35
USP35-206ENST00000530535 RIN2Q8WYP3 895 aaPredicted RBP17.21■□□□□ 0.35
USP35-206ENST00000530535 BAP1Q92560 729 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 RIOX1Q9H6W3 641 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 FAM207AQ9NSI2 230 aaPredicted RBP17.21■□□□□ 0.35
USP35-206ENST00000530535 SWAP70Q9UH65 585 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 MYO1CO00159 1063 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 ENTPD3O75355 529 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 SLURP2P0DP57 97 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 PRLRP16471 622 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 RPS12P25398 132 aaKnown RBP17.21■□□□□ 0.35
USP35-206ENST00000530535 EIF4A3P38919 411 aaKnown RBP17.21■□□□□ 0.35
USP35-206ENST00000530535 CCDC96Q2M329 555 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 GDAP1L1Q96MZ0 367 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 TMOD2Q9NZR1 351 aa17.21■□□□□ 0.35
USP35-206ENST00000530535 SEC63Q9UGP8 760 aaKnown RBP17.21■□□□□ 0.35
USP35-206ENST00000530535 DDTLA6NHG4 134 aaPredicted RBP17.2■□□□□ 0.34
USP35-206ENST00000530535 MOCS3O95396 460 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 MMP14P50281 582 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 ASTE1Q2TB18 679 aaPredicted RBP17.2■□□□□ 0.34
USP35-206ENST00000530535 LARP4BQ92615 738 aaKnown RBP17.2■□□□□ 0.34
USP35-206ENST00000530535 NUDT12Q9BQG2 462 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 TSPYL1Q9H0U9 437 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 EHD4Q9H223 541 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 ZNF70Q9UC06 446 aaPredicted RBP17.2■□□□□ 0.34
USP35-206ENST00000530535 LRRC53A6NM62 1247 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 USP17L5A8MUK1 530 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 TACC1O75410 805 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 TDP2O95551 362 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 GGCXP38435 758 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 CALCRLQ16602 461 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 IQCEQ6IPM2 695 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.2■□□□□ 0.34
USP35-206ENST00000530535 SH3BP5LQ7L8J4 393 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 AFAP1L1Q8TED9 768 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 HDAC7Q8WUI4 952 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 UBA5Q9GZZ9 404 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 VAT1LQ9HCJ6 419 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 PI4KBQ9UBF8 816 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 SALL4Q9UJQ4 1053 aa17.2■□□□□ 0.34
USP35-206ENST00000530535 RRP15Q9Y3B9 282 aaKnown RBP17.2■□□□□ 0.34
USP35-206ENST00000530535 CLRN2A0PK11 232 aa17.19■□□□□ 0.34
USP35-206ENST00000530535 TRIM66O15016 1216 aa17.19■□□□□ 0.34
USP35-206ENST00000530535 PJA2O43164 708 aa17.19■□□□□ 0.34
USP35-206ENST00000530535 USO1O60763 962 aaKnown RBP17.19■□□□□ 0.34
USP35-206ENST00000530535 LMNB1P20700 586 aa17.19■□□□□ 0.34
USP35-206ENST00000530535 LRRC63Q05C16 580 aa17.19■□□□□ 0.34
USP35-206ENST00000530535 SPDYE2Q495Y8 402 aa17.19■□□□□ 0.34
USP35-206ENST00000530535 TMEM119Q4V9L6 283 aa17.19■□□□□ 0.34
USP35-206ENST00000530535 DYMQ7RTS9 669 aa17.19■□□□□ 0.34
USP35-206ENST00000530535 KCNK18Q7Z418 384 aa17.19■□□□□ 0.34
USP35-206ENST00000530535 GLIS3Q8NEA6 775 aa17.19■□□□□ 0.34
USP35-206ENST00000530535 RAD54LQ92698 747 aa17.19■□□□□ 0.34
USP35-206ENST00000530535 ZBED3Q96IU2 234 aaPredicted RBP17.19■□□□□ 0.34
USP35-206ENST00000530535 MYOZ2Q9NPC6 264 aa17.19■□□□□ 0.34
USP35-206ENST00000530535 POTEMA6NI47 508 aa17.18■□□□□ 0.34
USP35-206ENST00000530535 PDHBP11177 359 aa17.18■□□□□ 0.34
USP35-206ENST00000530535 FOXR2Q6PJQ5 311 aa17.18■□□□□ 0.34
USP35-206ENST00000530535 SPATA4Q8NEY3 305 aa17.18■□□□□ 0.34
USP35-206ENST00000530535 OSBPL9Q96SU4 736 aa17.18■□□□□ 0.34
USP35-206ENST00000530535 DMGDHQ9UI17 866 aaKnown RBP17.18■□□□□ 0.34
USP35-206ENST00000530535 FAM184BQ9ULE4 1060 aa17.18■□□□□ 0.34
USP35-206ENST00000530535 GJA3Q9Y6H8 435 aa17.18■□□□□ 0.34
USP35-206ENST00000530535 PLIN4Q96Q06 1357 aa17.18■□□□□ 0.34
USP35-206ENST00000530535 SHTN1A0MZ66 631 aa17.18■□□□□ 0.34
USP35-206ENST00000530535 TCP10L2B9ZVM9 353 aa17.18■□□□□ 0.34
USP35-206ENST00000530535 SHMT1P34896 483 aa17.18■□□□□ 0.34
USP35-206ENST00000530535 ZNF280AP59817 542 aaPredicted RBP17.18■□□□□ 0.34
USP35-206ENST00000530535 HGSNATQ68CP4 663 aa17.18■□□□□ 0.34
USP35-206ENST00000530535 PDXDC1Q6P996 788 aa17.18■□□□□ 0.34
USP35-206ENST00000530535 CCDC84Q86UT8 332 aaPredicted RBP17.18■□□□□ 0.34
USP35-206ENST00000530535 RUBCNQ92622 972 aa17.18■□□□□ 0.34
USP35-206ENST00000530535 LRRC1Q9BTT6 524 aa17.18■□□□□ 0.34
USP35-206ENST00000530535 MMRN2Q9H8L6 949 aa17.18■□□□□ 0.34
USP35-206ENST00000530535 MYH10P35580 1976 aa17.17■□□□□ 0.34
USP35-206ENST00000530535 hCG_1984214I3L0E3 225 aa17.17■□□□□ 0.34
USP35-206ENST00000530535 WNT10BO00744 389 aa17.17■□□□□ 0.34
USP35-206ENST00000530535 GMPSP49915 693 aaPredicted RBP17.17■□□□□ 0.34
USP35-206ENST00000530535 KCNMA1Q12791 1236 aa17.17■□□□□ 0.34
USP35-206ENST00000530535 MAPK8IP2Q13387 824 aaPredicted RBP17.17■□□□□ 0.34
USP35-206ENST00000530535 ZCWPW2Q504Y3 356 aa17.17■□□□□ 0.34
USP35-206ENST00000530535 NFRKBQ6P4R8 1299 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms