RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 PKD2L1Q9P0L9 805 aa14.97□□□□□ -0.01
CPSF1-204ENST00000529288 MTUS1Q9ULD2 1270 aa14.97□□□□□ -0.01
CPSF1-204ENST00000529288 ABHD14A-ACY1A0A1B0GW23 586 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 LCHNA4D1U4 455 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 RSPH10B2B2RC85 870 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 TREHO43280 583 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 STAM2O75886 525 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 CXCL10P02778 98 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 CTSHP09668 335 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 RSPH10BP0C881 870 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 CALM1P0DP23 149 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 CALM2P0DP24 149 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 CALM3P0DP25 149 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 HOXD8P13378 290 aaPredicted RBP14.96□□□□□ -0.01
CPSF1-204ENST00000529288 ICAM3P32942 547 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 RBL2Q08999 1139 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 SEMA3FQ13275 785 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 SCN5AQ14524 2016 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 UBE2SQ16763 222 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 METTL7BQ6UX53 244 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 SPRED2Q7Z698 418 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 TRIM50Q86XT4 487 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 INPP4AQ96PE3 977 aaPredicted RBP14.96□□□□□ -0.01
CPSF1-204ENST00000529288 GPR20Q99678 358 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 SETD4Q9NVD3 440 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 TELO2Q9Y4R8 837 aa14.96□□□□□ -0.01
CPSF1-204ENST00000529288 CHD9Q3L8U1 2897 aa14.95□□□□□ -0.02
CPSF1-204ENST00000529288 MEIS2O14770 477 aa14.95□□□□□ -0.02
CPSF1-204ENST00000529288 LGR5O75473 907 aa14.95□□□□□ -0.02
CPSF1-204ENST00000529288 SMARCA1P28370 1054 aa14.95□□□□□ -0.02
CPSF1-204ENST00000529288 PCNX4Q63HM2 1172 aa14.95□□□□□ -0.02
CPSF1-204ENST00000529288 TRAF7Q6Q0C0 670 aa14.95□□□□□ -0.02
CPSF1-204ENST00000529288 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.95□□□□□ -0.02
CPSF1-204ENST00000529288 HEATR3Q7Z4Q2 680 aa14.95□□□□□ -0.02
CPSF1-204ENST00000529288 SERINC5Q86VE9 423 aa14.95□□□□□ -0.02
CPSF1-204ENST00000529288 MICU3Q86XE3 530 aa14.95□□□□□ -0.02
CPSF1-204ENST00000529288 MTA3Q9BTC8 594 aa14.95□□□□□ -0.02
CPSF1-204ENST00000529288 USP26Q9BXU7 913 aa14.95□□□□□ -0.02
CPSF1-204ENST00000529288 RNPEPQ9H4A4 650 aa14.95□□□□□ -0.02
CPSF1-204ENST00000529288 MTCH2Q9Y6C9 303 aa14.95□□□□□ -0.02
CPSF1-204ENST00000529288 GNAT1P11488 350 aa14.94□□□□□ -0.02
CPSF1-204ENST00000529288 LIFRP42702 1097 aa14.94□□□□□ -0.02
CPSF1-204ENST00000529288 ARHGAP4P98171 946 aa14.94□□□□□ -0.02
CPSF1-204ENST00000529288 GRB10Q13322 594 aa14.94□□□□□ -0.02
CPSF1-204ENST00000529288 MBTPS1Q14703 1052 aa14.94□□□□□ -0.02
CPSF1-204ENST00000529288 NECTIN1Q15223 517 aa14.94□□□□□ -0.02
CPSF1-204ENST00000529288 RNF20Q5VTR2 975 aa14.94□□□□□ -0.02
CPSF1-204ENST00000529288 MYOCDQ8IZQ8 938 aa14.94□□□□□ -0.02
CPSF1-204ENST00000529288 FANCBQ8NB91 859 aa14.94□□□□□ -0.02
CPSF1-204ENST00000529288 DBF4BQ8NFT6 615 aa14.94□□□□□ -0.02
CPSF1-204ENST00000529288 ADAMTS19Q8TE59 1207 aa14.94□□□□□ -0.02
CPSF1-204ENST00000529288 TCEANC2Q96MN5 208 aa14.94□□□□□ -0.02
CPSF1-204ENST00000529288 RAD9AQ99638 391 aa14.94□□□□□ -0.02
CPSF1-204ENST00000529288 ZNF215Q9UL58 517 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-204ENST00000529288 NAP1L2Q9ULW6 460 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-204ENST00000529288 MYH6P13533 1939 aa14.94□□□□□ -0.02
CPSF1-204ENST00000529288 FRMPD4Q14CM0 1322 aa14.93□□□□□ -0.02
CPSF1-204ENST00000529288 CUL9Q8IWT3 2517 aa14.93□□□□□ -0.02
CPSF1-204ENST00000529288 SPDYE3A6NKU9 549 aa14.93□□□□□ -0.02
CPSF1-204ENST00000529288 TNFRSF10AO00220 468 aa14.93□□□□□ -0.02
CPSF1-204ENST00000529288 PIK3CDO00329 1044 aa14.93□□□□□ -0.02
CPSF1-204ENST00000529288 EFCAB14O75071 495 aa14.93□□□□□ -0.02
CPSF1-204ENST00000529288 AMHP03971 560 aa14.93□□□□□ -0.02
CPSF1-204ENST00000529288 TFF2Q03403 129 aa14.93□□□□□ -0.02
CPSF1-204ENST00000529288 XRRA1Q6P2D8 792 aa14.93□□□□□ -0.02
CPSF1-204ENST00000529288 GDPD5Q8WTR4 605 aa14.93□□□□□ -0.02
CPSF1-204ENST00000529288 NEK1Q96PY6 1258 aa14.93□□□□□ -0.02
CPSF1-204ENST00000529288 PCDHA6Q9UN73 950 aa14.93□□□□□ -0.02
CPSF1-204ENST00000529288 PCDHA8Q9Y5H6 950 aa14.93□□□□□ -0.02
CPSF1-204ENST00000529288 EMSYQ7Z589 1322 aa14.92□□□□□ -0.02
CPSF1-204ENST00000529288 ATP9AO75110 1047 aa14.92□□□□□ -0.02
CPSF1-204ENST00000529288 UPP2O95045 317 aa14.92□□□□□ -0.02
CPSF1-204ENST00000529288 GJB5O95377 273 aa14.92□□□□□ -0.02
CPSF1-204ENST00000529288 MARK3P27448 753 aa14.92□□□□□ -0.02
CPSF1-204ENST00000529288 TCF7P36402 384 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-204ENST00000529288 TMTC3Q6ZXV5 915 aa14.92□□□□□ -0.02
CPSF1-204ENST00000529288 GIMAP8Q8ND71 665 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-204ENST00000529288 SEPT8Q92599 483 aa14.92□□□□□ -0.02
CPSF1-204ENST00000529288 UHRF1Q96T88 793 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-204ENST00000529288 KIAA1217Q5T5P2 1943 aa14.92□□□□□ -0.02
CPSF1-204ENST00000529288 BAZ2BQ9UIF8 2168 aaKnown RBP14.91□□□□□ -0.02
CPSF1-204ENST00000529288 GBF1Q92538 1859 aa14.91□□□□□ -0.02
CPSF1-204ENST00000529288 MTMR1Q13613 665 aa14.91□□□□□ -0.02
CPSF1-204ENST00000529288 GLG1Q92896 1179 aa14.91□□□□□ -0.02
CPSF1-204ENST00000529288 GPRASP2Q96D09 838 aa14.91□□□□□ -0.02
CPSF1-204ENST00000529288 CDHR1Q96JP9 859 aa14.91□□□□□ -0.02
CPSF1-204ENST00000529288 TGS1Q96RS0 853 aaKnown RBP14.91□□□□□ -0.02
CPSF1-204ENST00000529288 SENP7Q9BQF6 1050 aa14.91□□□□□ -0.02
CPSF1-204ENST00000529288 EHMT1Q9H9B1 1298 aa14.91□□□□□ -0.02
CPSF1-204ENST00000529288 VCANP13611 3396 aa14.9□□□□□ -0.02
CPSF1-204ENST00000529288 LINC01553A4QN01 128 aa14.9□□□□□ -0.02
CPSF1-204ENST00000529288 ITGB5P18084 799 aa14.9□□□□□ -0.02
CPSF1-204ENST00000529288 KCNQ1P51787 676 aa14.9□□□□□ -0.02
CPSF1-204ENST00000529288 NAPAP54920 295 aa14.9□□□□□ -0.02
CPSF1-204ENST00000529288 IGBP1P78318 339 aa14.9□□□□□ -0.02
CPSF1-204ENST00000529288 FGD1P98174 961 aa14.9□□□□□ -0.02
CPSF1-204ENST00000529288 RTN1Q16799 776 aa14.9□□□□□ -0.02
CPSF1-204ENST00000529288 AAK1Q2M2I8 961 aa14.9□□□□□ -0.02
CPSF1-204ENST00000529288 PLEKHG4Q58EX7 1191 aa14.9□□□□□ -0.02
CPSF1-204ENST00000529288 BMP2KLQ5H9B9 411 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms