RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 IGDCC4Q8TDY8 1250 aa20.18■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 TGS1Q96RS0 853 aaKnown RBP20.18■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 SENP2Q9HC62 589 aa20.18■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 ZNF215Q9UL58 517 aaPredicted RBP20.18■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 SPATA31C2B4DYI2 1134 aa20.17■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 PIK3CDO00329 1044 aa20.17■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 SORBS3O60504 671 aa20.17■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 ARHGEF15O94989 841 aa20.17■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 AMHP03971 560 aa20.17■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 SMIM10L2AP0DMW4 78 aa20.17■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 SMIM10L2BP0DMW5 78 aa20.17■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 THPOP40225 353 aa20.17■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 ANTXR2P58335 489 aa20.17■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 MRPS9P82933 396 aaKnown RBP20.17■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 PCNX4Q63HM2 1172 aa20.17■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 TMEM87BQ96K49 555 aa20.17■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 SENP7Q9BQF6 1050 aa20.17■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 INSL6Q9Y581 213 aa20.17■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 RBM8AQ9Y5S9 174 aaKnown RBP20.17■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 NCOR1O75376 2440 aa20.16■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 MUC3AQ02505 3323 aa20.16■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 CALM1P0DP23 149 aa20.16■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 CALM2P0DP24 149 aa20.16■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 CALM3P0DP25 149 aa20.16■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 BMP1P13497 986 aa20.16■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 MCM5P33992 734 aa20.16■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 ERVK-21P61565 698 aa20.16■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 ZNF200P98182 395 aaPredicted RBP20.16■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 MBTPS1Q14703 1052 aa20.16■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 NLRX1Q86UT6 975 aa20.16■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 GPKOWQ92917 476 aaPredicted RBP eCLIP20.16■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 WNT8BQ93098 351 aa20.16■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 HLA-CQ95604 372 aa20.16■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 CDHR1Q96JP9 859 aa20.16■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 LY9Q9HBG7 655 aa20.16■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 LCHNA4D1U4 455 aa20.15■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 LPXNO60711 386 aa20.15■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 TFF2Q03403 129 aa20.15■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 PLEKHG4Q58EX7 1191 aa20.15■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 CYFIP1Q7L576 1253 aa20.15■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 SEPT8Q92599 483 aa20.15■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 GPR20Q99678 358 aa20.15■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 TAF6LQ9Y6J9 622 aa20.15■□□□□ 0.82
CKLF-CMTM1-202ENST00000527845 DOCK5Q9H7D0 1870 aa20.14■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 COL4A6Q14031 1691 aa20.14■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 CCDC69A6NI79 296 aa20.14■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 HIC1Q14526 733 aa20.14■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 NFXL1Q6ZNB6 911 aa20.14■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 DBF4BQ8NFT6 615 aa20.14■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 PIBF1Q8WXW3 757 aa20.14■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 APBB2Q92870 758 aa20.14■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 SAMD11Q96NU1 681 aa20.14■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 RNPEPQ9H4A4 650 aa20.14■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 LINC01553A4QN01 128 aa20.13■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 PRC1O43663 620 aa20.13■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 LIFRP42702 1097 aa20.13■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 MKRN4PQ13434 485 aaPredicted RBP20.13■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 TCTN1Q2MV58 587 aa20.13■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 TMCO2Q7Z6W1 182 aaPredicted RBP20.13■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 GDPD5Q8WTR4 605 aa20.13■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 GPRASP2Q96D09 838 aa20.13■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 ZFP91Q96JP5 570 aaPredicted RBP20.13■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 TCF20Q9UGU0 1960 aaKnown RBP20.13■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 KAT6AQ92794 2004 aa20.12■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 MEIS2O14770 477 aa20.12■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 TREHO43280 583 aa20.12■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 KCNQ1P51787 676 aa20.12■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 HTRA4P83105 476 aaPredicted RBP20.12■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 SEMA3FQ13275 785 aa20.12■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 KRT40Q6A162 431 aa20.12■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 USP17L6PQ6QN14 398 aa20.12■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 MYOCDQ8IZQ8 938 aa20.12■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 MYL10Q9BUA6 226 aa20.12■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 SUGCTQ9HAC7 445 aa20.12■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 RTEL1Q9NZ71 1219 aa20.12■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 NRCAMQ92823 1304 aa20.11■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 SH2B2O14492 632 aaPredicted RBP20.11■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 TEX2Q8IWB9 1127 aa20.11■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 FBXO22Q8NEZ5 403 aa20.11■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 SP7Q8TDD2 431 aaPredicted RBP20.11■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 C1QTNF1Q9BXJ1 281 aa20.11■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 PSTPIP2Q9H939 334 aa20.11■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 EHMT1Q9H9B1 1298 aa20.11■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 MTUS1Q9ULD2 1270 aa20.11■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 REV3LO60673 3130 aa20.11■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 RPLP2P05387 115 aaKnown RBP20.1■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 FAM26DQ5JW98 314 aa20.1■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 UTP14CQ5TAP6 766 aaKnown RBP20.1■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 FAM117BQ6P1L5 589 aa20.1■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 TAF2Q6P1X5 1199 aa20.1■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.1■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 SPRED2Q7Z698 418 aa20.1■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 SLC12A7Q9Y666 1083 aa20.1■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 BDP1A6H8Y1 2624 aa20.1■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 RALGAPA2Q2PPJ7 1873 aa20.09■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 SPDYE3A6NKU9 549 aa20.09■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 MAFGO15525 162 aa20.09■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 CTSHP09668 335 aa20.09■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 COL9A1P20849 921 aa20.09■□□□□ 0.81
CKLF-CMTM1-202ENST00000527845 ARHGAP4P98171 946 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms