RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 HSCBQ8IWL3 235 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 DIS3L2Q8IYB7 885 aaKnown RBP6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 CCDC155Q8N6L0 562 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 C7orf31Q8N865 590 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 TBCKQ8TEA7 893 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 TMX3Q96JJ7 454 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 TOX2Q96NM4 488 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 ZNF577Q9BSK1 485 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 AZI2Q9H6S1 392 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 AGO4Q9HCK5 861 aaKnown RBP6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 KCNH7Q9NS40 1196 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 TBC1D22BQ9NU19 505 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 TMEM39AQ9NV64 488 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 SLC9A2Q9UBY0 812 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 ZMYND8Q9ULU4 1186 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 SMC3Q9UQE7 1217 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 NFASCO94856 1347 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 HTTP42858 3142 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 FRMPD3Q5JV73 1810 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 LCTP09848 1927 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 FAM86B1E9PN63 330 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 H3BRB1 525 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 DDX39AO00148 427 aaKnown RBP6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 IPO5O00410 1097 aaKnown RBP6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 MEIS1O00470 390 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 BACH1O14867 736 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 GAS7O60861 476 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 BAG4O95429 457 aaKnown RBP6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 F2P00734 622 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 LGALS2P05162 132 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 FAM86B2P0C5J1 330 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 GNAT1P11488 350 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 FDPSP14324 419 aaKnown RBP6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 RAG1P15918 1043 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 KCNA2P16389 499 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 SYN1P17600 705 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 PTGS1P23219 599 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 CIITAP33076 1130 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 TCF7P36402 384 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 PSEN2P49810 448 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 KRT76Q01546 638 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 SP2Q02086 613 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 GUCY1B3Q02153 619 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 SEMA3FQ13275 785 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 KIAA0100Q14667 2235 aaKnown RBP6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 MFSD10Q14728 455 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 INF2Q27J81 1249 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 KIAA0753Q2KHM9 967 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 LETM2Q2VYF4 491 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 NBPF20Q3BBV1 942 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 HSDL1Q3SXM5 330 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 UTP14CQ5TAP6 766 aaKnown RBP6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 FAM160B1Q5W0V3 765 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 KRT40Q6A162 431 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 MIS18BP1Q6P0N0 1132 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 MOXD1Q6UVY6 613 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 PIK3AP1Q6ZUJ8 805 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 SEPT1Q8WYJ6 367 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 GLG1Q92896 1179 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 GPR20Q99678 358 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 TEKT3Q9BXF9 490 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 SMARCAD1Q9H4L7 1026 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 TUT1Q9H6E5 874 aaKnown RBP6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 ERAP1Q9NZ08 941 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 DDX25Q9UHL0 483 aaKnown RBP6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 NOL7Q9UMY1 257 aaKnown RBP6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 SAMM50Q9Y512 469 aa6.12□□□□□ -1.43
HMGB1P40-201ENST00000525121 BAZ2BQ9UIF8 2168 aaKnown RBP6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 EMSYQ7Z589 1322 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 IGLV3-22A0A075B6J6 115 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 WDR64B1ANS9 1081 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 K7ELQ4 463 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 CCNT1O60563 726 aaKnown RBP6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 PSAPP07602 524 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 ARP10275 920 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 HOXD8P13378 290 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 PDCP20941 246 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 SLC26A2P50443 739 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 JAK3P52333 1124 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 ACTR2P61160 394 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 ST3GAL1Q11201 340 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 BFSP2Q13515 415 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 PTGISQ16647 500 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 Q4G0T1 1027 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 LRCH2Q5VUJ6 765 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 MCTP1Q6DN14 999 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 ZNF746Q6NUN9 644 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 FAM126BQ8IXS8 530 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 CKAP2LQ8IYA6 745 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 SMAP1Q8IYB5 467 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 SLFN12Q8IYM2 578 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 TMEM199Q8N511 208 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 SLC43A3Q8NBI5 491 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 RETREG2Q8NC44 543 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 FBXO18Q8NFZ0 1043 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 CYP2W1Q8TAV3 490 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 CRYGNQ8WXF5 182 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 RIT2Q99578 217 aa6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 FOXP1Q9H334 677 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P40-201ENST00000525121 HIPK3Q9H422 1215 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms