RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 CNTNAP3BQ96NU0 1288 aa16.36■□□□□ 0.21
NKX3-1-202ENST00000523261 CNTNAP3Q9BZ76 1288 aa16.36■□□□□ 0.21
NKX3-1-202ENST00000523261 GPAA1O43292 621 aa16.35■□□□□ 0.21
NKX3-1-202ENST00000523261 NMT2O60551 498 aa16.35■□□□□ 0.21
NKX3-1-202ENST00000523261 ITGB1P05556 798 aa16.35■□□□□ 0.21
NKX3-1-202ENST00000523261 CTSHP09668 335 aa16.35■□□□□ 0.21
NKX3-1-202ENST00000523261 RLBP1P12271 317 aa16.35■□□□□ 0.21
NKX3-1-202ENST00000523261 HOXC8P31273 242 aa16.35■□□□□ 0.21
NKX3-1-202ENST00000523261 ZBTB33Q86T24 672 aa16.35■□□□□ 0.21
NKX3-1-202ENST00000523261 SPPL3Q8TCT6 385 aa16.35■□□□□ 0.21
NKX3-1-202ENST00000523261 ZNF689Q96CS4 500 aaPredicted RBP16.35■□□□□ 0.21
NKX3-1-202ENST00000523261 PNMA2Q9UL42 364 aa16.35■□□□□ 0.21
NKX3-1-202ENST00000523261 MYH7BA7E2Y1 1941 aa16.35■□□□□ 0.21
NKX3-1-202ENST00000523261 ZNF316A6NFI3 1004 aaPredicted RBP16.34■□□□□ 0.21
NKX3-1-202ENST00000523261 CAND2O75155 1236 aa16.34■□□□□ 0.21
NKX3-1-202ENST00000523261 APPP05067 770 aa16.34■□□□□ 0.21
NKX3-1-202ENST00000523261 GNAT2P19087 354 aa16.34■□□□□ 0.21
NKX3-1-202ENST00000523261 NOVP48745 357 aa16.34■□□□□ 0.21
NKX3-1-202ENST00000523261 LAMC2Q13753 1193 aa16.34■□□□□ 0.21
NKX3-1-202ENST00000523261 BTG3Q14201 252 aaPredicted RBP16.34■□□□□ 0.21
NKX3-1-202ENST00000523261 RBM23Q86U06 439 aaKnown RBP16.34■□□□□ 0.21
NKX3-1-202ENST00000523261 IFNL3Q8IZI9 196 aa16.34■□□□□ 0.21
NKX3-1-202ENST00000523261 APPBP2Q92624 585 aa16.34■□□□□ 0.21
NKX3-1-202ENST00000523261 ATP6V0A1Q93050 837 aa16.34■□□□□ 0.21
NKX3-1-202ENST00000523261 WDR19Q8NEZ3 1342 aa16.34■□□□□ 0.21
NKX3-1-202ENST00000523261 KIAA1671Q9BY89 1806 aa16.33■□□□□ 0.21
NKX3-1-202ENST00000523261 C17orf102A2RUQ5 167 aa16.33■□□□□ 0.2
NKX3-1-202ENST00000523261 TREHO43280 583 aa16.33■□□□□ 0.2
NKX3-1-202ENST00000523261 PPFIA4O75335 1185 aa16.33■□□□□ 0.2
NKX3-1-202ENST00000523261 STXBP2Q15833 593 aa16.33■□□□□ 0.2
NKX3-1-202ENST00000523261 KREMEN2Q8NCW0 462 aa16.33■□□□□ 0.2
NKX3-1-202ENST00000523261 RGS22Q8NE09 1264 aa16.33■□□□□ 0.2
NKX3-1-202ENST00000523261 GPCPD1Q9NPB8 672 aa16.33■□□□□ 0.2
NKX3-1-202ENST00000523261 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.33■□□□□ 0.2
NKX3-1-202ENST00000523261 PCDHGC5Q9Y5F6 944 aa16.33■□□□□ 0.2
NKX3-1-202ENST00000523261 SLC3A2P08195 630 aaKnown RBP16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 TTC3P53804 2025 aa16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 RBM10P98175 930 aaKnown RBP16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 NAALADL2Q58DX5 795 aa16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 FRMPD2Q68DX3 1309 aaPredicted RBP16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 ASTLQ6HA08 431 aaPredicted RBP16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 FTSJ3Q8IY81 847 aaKnown RBP16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 UBALD2Q8IYN6 164 aa16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 VN1R2Q8NFZ6 395 aa16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 CHD6Q8TD26 2715 aa16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 ATP8B4Q8TF62 1192 aa16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 TAAR1Q96RJ0 339 aa16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 C16orf70Q9BSU1 422 aa16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 MYO10Q9HD67 2058 aa16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 COL20A1Q9P218 1284 aa16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 BAHCC1Q9P281 2608 aa16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 MRPL42Q9Y6G3 142 aaKnown RBP16.32■□□□□ 0.2
NKX3-1-202ENST00000523261 TSPY2A6NKD2 308 aa16.31■□□□□ 0.2
NKX3-1-202ENST00000523261 PATL2C9JE40 543 aaKnown RBP16.31■□□□□ 0.2
NKX3-1-202ENST00000523261 M0R2C6 588 aa16.31■□□□□ 0.2
NKX3-1-202ENST00000523261 BRD1O95696 1058 aa16.31■□□□□ 0.2
NKX3-1-202ENST00000523261 PPARAQ07869 468 aa16.31■□□□□ 0.2
NKX3-1-202ENST00000523261 PUM1Q14671 1186 aaKnown RBP eCLIP16.31■□□□□ 0.2
NKX3-1-202ENST00000523261 KLHL23Q8NBE8 558 aa16.31■□□□□ 0.2
NKX3-1-202ENST00000523261 SYTL5Q8TDW5 730 aaPredicted RBP16.31■□□□□ 0.2
NKX3-1-202ENST00000523261 NSUN6Q8TEA1 469 aaKnown RBP16.31■□□□□ 0.2
NKX3-1-202ENST00000523261 POF1BQ8WVV4 589 aa16.31■□□□□ 0.2
NKX3-1-202ENST00000523261 TBC1D5Q92609 795 aa16.31■□□□□ 0.2
NKX3-1-202ENST00000523261 IWS1Q96ST2 819 aa16.31■□□□□ 0.2
NKX3-1-202ENST00000523261 TLE6Q9H808 572 aa16.31■□□□□ 0.2
NKX3-1-202ENST00000523261 SORCS3Q9UPU3 1222 aa16.31■□□□□ 0.2
NKX3-1-202ENST00000523261 MRVI1Q9Y6F6 885 aa16.31■□□□□ 0.2
NKX3-1-202ENST00000523261 DGKIO75912 1065 aa16.3■□□□□ 0.2
NKX3-1-202ENST00000523261 MTMR3Q13615 1198 aa16.3■□□□□ 0.2
NKX3-1-202ENST00000523261 HSDL1Q3SXM5 330 aa16.3■□□□□ 0.2
NKX3-1-202ENST00000523261 FAM26DQ5JW98 314 aa16.3■□□□□ 0.2
NKX3-1-202ENST00000523261 MYSM1Q5VVJ2 828 aa16.3■□□□□ 0.2
NKX3-1-202ENST00000523261 KBTBD3Q8NAB2 608 aa16.3■□□□□ 0.2
NKX3-1-202ENST00000523261 S1PR5Q9H228 398 aa16.3■□□□□ 0.2
NKX3-1-202ENST00000523261 RNPEPQ9H4A4 650 aa16.3■□□□□ 0.2
NKX3-1-202ENST00000523261 ENPP3O14638 875 aa16.29■□□□□ 0.2
NKX3-1-202ENST00000523261 RNF113AO15541 343 aaKnown RBP16.29■□□□□ 0.2
NKX3-1-202ENST00000523261 RAB11FIP3O75154 756 aa16.29■□□□□ 0.2
NKX3-1-202ENST00000523261 SMIM10L2AP0DMW4 78 aa16.29■□□□□ 0.2
NKX3-1-202ENST00000523261 SMIM10L2BP0DMW5 78 aa16.29■□□□□ 0.2
NKX3-1-202ENST00000523261 SP100P23497 879 aaPredicted RBP16.29■□□□□ 0.2
NKX3-1-202ENST00000523261 CLCN5P51795 746 aa16.29■□□□□ 0.2
NKX3-1-202ENST00000523261 USH1GQ495M9 461 aa16.29■□□□□ 0.2
NKX3-1-202ENST00000523261 RMDN3Q96TC7 470 aa16.29■□□□□ 0.2
NKX3-1-202ENST00000523261 NACAP1Q9BZK3 213 aa16.29■□□□□ 0.2
NKX3-1-202ENST00000523261 MAF1Q9H063 256 aa16.29■□□□□ 0.2
NKX3-1-202ENST00000523261 SPTBN2O15020 2390 aa16.29■□□□□ 0.2
NKX3-1-202ENST00000523261 PLXNA4Q9HCM2 1894 aa16.29■□□□□ 0.2
NKX3-1-202ENST00000523261 CHD8Q9HCK8 2581 aa16.28■□□□□ 0.2
NKX3-1-202ENST00000523261 PER2O15055 1255 aa16.28■□□□□ 0.2
NKX3-1-202ENST00000523261 EIF3JO75822 258 aaKnown RBP16.28■□□□□ 0.2
NKX3-1-202ENST00000523261 SPATA33Q96N06 139 aa16.28■□□□□ 0.2
NKX3-1-202ENST00000523261 NEK1Q96PY6 1258 aa16.28■□□□□ 0.2
NKX3-1-202ENST00000523261 NAPBQ9H115 298 aa16.28■□□□□ 0.2
NKX3-1-202ENST00000523261 SMOC2Q9H3U7 446 aa16.28■□□□□ 0.2
NKX3-1-202ENST00000523261 MAP1BP46821 2468 aaKnown RBP16.28■□□□□ 0.2
NKX3-1-202ENST00000523261 FRYLO94915 3013 aa16.28■□□□□ 0.2
NKX3-1-202ENST00000523261 OTOGLQ3ZCN5 2332 aa16.28■□□□□ 0.2
NKX3-1-202ENST00000523261 CFAP47Q6ZTR5 3102 aa16.28■□□□□ 0.2
NKX3-1-202ENST00000523261 H3BRB1 525 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms