RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 MTMR3Q13615 1198 aa13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 COL9A2Q14055 689 aaPredicted RBP13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 ANGPT1Q15389 498 aa13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 SYDE2Q5VT97 1194 aa13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 KLHL23Q8NBE8 558 aa13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 VN1R2Q8NFZ6 395 aa13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 SUSD6Q92537 303 aa13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 CLP1Q92989 425 aaKnown RBP13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 ZNF287Q9HBT7 754 aa13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 EPB41L4AQ9HCS5 686 aaPredicted RBP13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 MRPL42Q9Y6G3 142 aaKnown RBP13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 R4GN57 208 aa13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 DMXL1Q9Y485 3027 aa13.03□□□□□ -0.32
CTNNA1-234ENST00000522227 C17orf102A2RUQ5 167 aa13.03□□□□□ -0.32
CTNNA1-234ENST00000522227 PI15O43692 258 aa13.03□□□□□ -0.32
CTNNA1-234ENST00000522227 LMNAP02545 664 aaKnown RBP13.03□□□□□ -0.32
CTNNA1-234ENST00000522227 ASGR2P07307 311 aa13.03□□□□□ -0.32
CTNNA1-234ENST00000522227 RSPO4Q2I0M5 234 aaPredicted RBP13.03□□□□□ -0.32
CTNNA1-234ENST00000522227 TRMT2AQ8IZ69 625 aaKnown RBP13.03□□□□□ -0.32
CTNNA1-234ENST00000522227 CLASRPQ8N2M8 674 aaKnown RBP13.03□□□□□ -0.32
CTNNA1-234ENST00000522227 DCLK2Q8N568 766 aa13.03□□□□□ -0.32
CTNNA1-234ENST00000522227 DNERQ8NFT8 737 aa13.03□□□□□ -0.32
CTNNA1-234ENST00000522227 SORCS3Q9UPU3 1222 aa13.03□□□□□ -0.32
CTNNA1-234ENST00000522227 BAHCC1Q9P281 2608 aa13.03□□□□□ -0.32
CTNNA1-234ENST00000522227 TECP42680 631 aa13.02□□□□□ -0.33
CTNNA1-234ENST00000522227 USH1GQ495M9 461 aa13.02□□□□□ -0.33
CTNNA1-234ENST00000522227 LLGL2Q6P1M3 1020 aa13.02□□□□□ -0.33
CTNNA1-234ENST00000522227 TBC1D5Q92609 795 aa13.02□□□□□ -0.33
CTNNA1-234ENST00000522227 NEK1Q96PY6 1258 aa13.02□□□□□ -0.33
CTNNA1-234ENST00000522227 TAAR1Q96RJ0 339 aa13.02□□□□□ -0.33
CTNNA1-234ENST00000522227 PLVAPQ9BX97 442 aa13.02□□□□□ -0.33
CTNNA1-234ENST00000522227 MYO10Q9HD67 2058 aa13.01□□□□□ -0.33
CTNNA1-234ENST00000522227 C2CD4DB7Z1M9 353 aa13.01□□□□□ -0.33
CTNNA1-234ENST00000522227 GHRP10912 638 aa13.01□□□□□ -0.33
CTNNA1-234ENST00000522227 ZSCAN25Q6NSZ9 544 aa13.01□□□□□ -0.33
CTNNA1-234ENST00000522227 CEP85Q6P2H3 762 aa13.01□□□□□ -0.33
CTNNA1-234ENST00000522227 ITPRIPQ8IWB1 547 aa13.01□□□□□ -0.33
CTNNA1-234ENST00000522227 UBALD2Q8IYN6 164 aa13.01□□□□□ -0.33
CTNNA1-234ENST00000522227 CYP2W1Q8TAV3 490 aa13.01□□□□□ -0.33
CTNNA1-234ENST00000522227 APBB2Q92870 758 aa13.01□□□□□ -0.33
CTNNA1-234ENST00000522227 P2RX5Q93086 422 aa13.01□□□□□ -0.33
CTNNA1-234ENST00000522227 DDX41Q9UJV9 622 aaKnown RBP13.01□□□□□ -0.33
CTNNA1-234ENST00000522227 SUPT16HQ9Y5B9 1047 aaKnown RBP13.01□□□□□ -0.33
CTNNA1-234ENST00000522227 MRVI1Q9Y6F6 885 aa13.01□□□□□ -0.33
CTNNA1-234ENST00000522227 ACACBO00763 2458 aa13□□□□□ -0.33
CTNNA1-234ENST00000522227 PLIN4Q96Q06 1357 aa13□□□□□ -0.33
CTNNA1-234ENST00000522227 TSPY2A6NKD2 308 aa13□□□□□ -0.33
CTNNA1-234ENST00000522227 SMIM10L2AP0DMW4 78 aa13□□□□□ -0.33
CTNNA1-234ENST00000522227 SMIM10L2BP0DMW5 78 aa13□□□□□ -0.33
CTNNA1-234ENST00000522227 CLCN5P51795 746 aa13□□□□□ -0.33
CTNNA1-234ENST00000522227 LAMC2Q13753 1193 aa13□□□□□ -0.33
CTNNA1-234ENST00000522227 STXBP2Q15833 593 aa13□□□□□ -0.33
CTNNA1-234ENST00000522227 CWF19L1Q69YN2 538 aaKnown RBP13□□□□□ -0.33
CTNNA1-234ENST00000522227 PPTC7Q8NI37 304 aa13□□□□□ -0.33
CTNNA1-234ENST00000522227 RIN2Q8WYP3 895 aaPredicted RBP13□□□□□ -0.33
CTNNA1-234ENST00000522227 OSBP2Q969R2 916 aa13□□□□□ -0.33
CTNNA1-234ENST00000522227 ZNF689Q96CS4 500 aaPredicted RBP13□□□□□ -0.33
CTNNA1-234ENST00000522227 CHAMP1Q96JM3 812 aa13□□□□□ -0.33
CTNNA1-234ENST00000522227 SPATA33Q96N06 139 aa13□□□□□ -0.33
CTNNA1-234ENST00000522227 HAUS7Q99871 368 aa13□□□□□ -0.33
CTNNA1-234ENST00000522227 RC3H2Q9HBD1 1191 aaKnown RBP13□□□□□ -0.33
CTNNA1-234ENST00000522227 DLL3Q9NYJ7 618 aa13□□□□□ -0.33
CTNNA1-234ENST00000522227 DMDP11532 3685 aa13□□□□□ -0.33
CTNNA1-234ENST00000522227 ZNF316A6NFI3 1004 aaPredicted RBP12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 ENPP3O14638 875 aa12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 DGKIO75912 1065 aa12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 EIF2AK2P19525 551 aaKnown RBP12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 GATMP50440 423 aa12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 GIMAP6Q6P9H5 292 aa12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 DTWD2Q8NBA8 298 aa12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 ATP8B4Q8TF62 1192 aa12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 DCAF4Q8WV16 495 aa12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 S1PR5Q9H228 398 aa12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 RNPEPQ9H4A4 650 aa12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 IL17RBQ9NRM6 502 aa12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 SETD4Q9NVD3 440 aa12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 NR2E1Q9Y466 385 aa12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 MYH7BA7E2Y1 1941 aa12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 MYH7P12883 1935 aa12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 WDR87Q6ZQQ6 2873 aa12.99□□□□□ -0.33
CTNNA1-234ENST00000522227 KIAA1671Q9BY89 1806 aa12.98□□□□□ -0.33
CTNNA1-234ENST00000522227 STK25O00506 426 aa12.98□□□□□ -0.33
CTNNA1-234ENST00000522227 ATP5JP18859 108 aa12.98□□□□□ -0.33
CTNNA1-234ENST00000522227 DUSP6Q16828 381 aa12.98□□□□□ -0.33
CTNNA1-234ENST00000522227 HSDL1Q3SXM5 330 aa12.98□□□□□ -0.33
CTNNA1-234ENST00000522227 SPOUT1Q5T280 376 aaKnown RBP12.98□□□□□ -0.33
CTNNA1-234ENST00000522227 ANKRD54Q6NXT1 300 aa12.98□□□□□ -0.33
CTNNA1-234ENST00000522227 SYCE2Q6PIF2 218 aa12.98□□□□□ -0.33
CTNNA1-234ENST00000522227 CCDC105Q8IYK2 499 aa12.98□□□□□ -0.33
CTNNA1-234ENST00000522227 COL20A1Q9P218 1284 aa12.98□□□□□ -0.33
CTNNA1-234ENST00000522227 LIMD1Q9UGP4 676 aa12.98□□□□□ -0.33
CTNNA1-234ENST00000522227 ZNF292O60281 2723 aa12.98□□□□□ -0.33
CTNNA1-234ENST00000522227 SPTBN2O15020 2390 aa12.98□□□□□ -0.33
CTNNA1-234ENST00000522227 GPAA1O43292 621 aa12.97□□□□□ -0.33
CTNNA1-234ENST00000522227 WEE2P0C1S8 567 aa12.97□□□□□ -0.33
CTNNA1-234ENST00000522227 CTDSPL2Q05D32 466 aa12.97□□□□□ -0.33
CTNNA1-234ENST00000522227 APOBRQ0VD83 1088 aa12.97□□□□□ -0.33
CTNNA1-234ENST00000522227 NAALADL2Q58DX5 795 aa12.97□□□□□ -0.33
CTNNA1-234ENST00000522227 HSP90AB4PQ58FF6 505 aa12.97□□□□□ -0.33
CTNNA1-234ENST00000522227 PLPP4Q5VZY2 271 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms