RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 AMPD2Q01433 879 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 FAPQ12884 760 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 HLTFQ14527 1009 aaKnown RBP eCLIP6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 UVSSAQ2YD98 709 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 YOD1Q5VVQ6 348 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 AMIGO3Q86WK7 504 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 KIF18BQ86Y91 864 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 ZNF513Q8N8E2 541 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 DNAJB8Q8NHS0 232 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 NEDD1Q8NHV4 660 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 PPP1R13LQ8WUF5 828 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 CLUHP3Q96NS8 147 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 ZFYVE21Q9BQ24 234 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 NKX2-4Q9H2Z4 354 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 CYP26B1Q9NR63 512 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 SPEF1Q9Y4P9 236 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 ACTL7BQ9Y614 415 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 ANKRD36BQ8N2N9 1353 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 C4AP0C0L4 1744 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 AKAP11Q9UKA4 1901 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 H0YGN5 161 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 ZEB2O60315 1214 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 SLIT3O75094 1523 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 ALDH1L1O75891 902 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 SCG5P05408 212 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 CELA2BP08218 269 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 KCNJ6P48051 423 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 BRCA2P51587 3418 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 GFRA1P56159 465 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 POU4F1Q01851 419 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 SART3Q15020 963 aaKnown RBP6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 PKN2Q16513 984 aaKnown RBP6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 CCSAPQ6IQ19 270 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 LYPD4Q6UWN0 246 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 ADGRF5Q8IZF2 1346 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 C2CD4AQ8NCU7 369 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 OR2W6PQ8NHA6 318 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 WDR66Q8TBY9 1149 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 XAGE3Q8WTP9 111 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 DCAF4Q8WV16 495 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 LEO1Q8WVC0 666 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 VWCEQ96DN2 955 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 TTC1Q99614 292 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 MIPEPQ99797 713 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 DSCC1Q9BVC3 393 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 PUS7LQ9H0K6 701 aaKnown RBP6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 ACSS3Q9H6R3 686 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 TRIM39Q9HCM9 518 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 FAM105AQ9NUU6 356 aa6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 DICER1Q9UPY3 1922 aaKnown RBP6.12□□□□□ -1.43
HMGB1P23-201ENST00000518743 CCDC194A0A1B0GVG4 234 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 PRC1O43663 620 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 KCNH1O95259 989 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 RASGRP1O95267 797 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 SNRPB2P08579 225 aaKnown RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 POU3F3P20264 500 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 KIR3DL1P43629 444 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 TMF1P82094 1093 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 NRG1Q02297 640 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 CWF19L1Q69YN2 538 aaKnown RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 GTF2IRD2BQ6EKJ0 949 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 RSPO2Q6UXX9 243 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 BRAPQ7Z569 592 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 DDX53Q86TM3 631 aaKnown RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 GTF2IRD2Q86UP8 949 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 SPATS2Q86XZ4 545 aaKnown RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 FIBCD1Q8N539 461 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 ENOX1Q8TC92 643 aaKnown RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 PANK1Q8TE04 598 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 BTN2A2Q8WVV5 523 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 USP7Q93009 1102 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 ZNF512BQ96KM6 892 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 NACC1Q96RE7 527 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 HACL1Q9UJ83 578 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 MKL2Q9ULH7 1088 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 ADAMTS8Q9UP79 889 aa6.11□□□□□ -1.43
HMGB1P23-201ENST00000518743 CPSF1Q10570 1443 aaKnown RBP6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 ACEP12821 1306 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 SHOXO15266 292 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 DLX3O60479 287 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 DNAJC8O75937 253 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 WISP1O95388 367 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 EYA4O95677 639 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 C6orf222P0C671 652 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 DRD2P14416 443 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 SDSP20132 328 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 EPHX2P34913 555 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 NOP2P46087 812 aaKnown RBP6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 SCNN1BP51168 640 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 ZNF445P59923 1031 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 OCRLQ01968 901 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 CFAP100Q494V2 611 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 STYK1Q6J9G0 422 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 PNMA8AQ86V59 439 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 UBR7Q8N806 425 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 ADCY4Q8NFM4 1077 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 ORAI3Q9BRQ5 295 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 NOL6Q9H6R4 1146 aaKnown RBP6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 IFT22Q9H7X7 185 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 AKTIPQ9H8T0 292 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms