RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 ZBTB39O15060 712 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 NF2P35240 595 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 DNM2P50570 870 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 CRY2Q49AN0 593 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 PRR16Q569H4 304 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 HDAC7Q8WUI4 952 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 GOLPH3Q9H4A6 298 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 THAP9Q9H5L6 903 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 RIOX1Q9H6W3 641 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 VEZTQ9HBM0 779 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.2■□□□□ 0.188e-8■■■■□ 25.6
DDR1-271ENST00000513240 ZNHIT6Q9NWK9 470 aaKnown RBP16.2■□□□□ 0.18
DDR1-271ENST00000513240 SALL4Q9UJQ4 1053 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 PCDHA12Q9UN75 941 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 PACSIN2Q9UNF0 486 aaPredicted RBP16.2■□□□□ 0.18
DDR1-271ENST00000513240 PCDHA1Q9Y5I3 950 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 CAPN6Q9Y6Q1 641 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 PDS5AQ29RF7 1337 aaKnown RBP16.2■□□□□ 0.18
DDR1-271ENST00000513240 AHDC1Q5TGY3 1603 aaPredicted RBP16.2■□□□□ 0.18
DDR1-271ENST00000513240 LRRC53A6NM62 1247 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 BBOX1O75936 387 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 TTLL1O95922 423 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 KRT18P05783 430 aaKnown RBP16.2■□□□□ 0.18
DDR1-271ENST00000513240 TDRD12Q587J7 1177 aaKnown RBP16.2■□□□□ 0.18
DDR1-271ENST00000513240 KSR1Q8IVT5 923 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 PRPF38AQ8NAV1 312 aaKnown RBP16.2■□□□□ 0.18
DDR1-271ENST00000513240 DAGLBQ8NCG7 672 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 TBC1D5Q92609 795 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 ARHGAP20Q9P2F6 1191 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 MCM8Q9UJA3 840 aa16.2■□□□□ 0.18
DDR1-271ENST00000513240 POTEB2H3BUK9 544 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 HSPA1LP34931 641 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 SLC1A4P43007 532 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 ACTN3Q08043 901 aaPredicted RBP16.19■□□□□ 0.18
DDR1-271ENST00000513240 ZNF543Q08ER8 600 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 PABPC4Q13310 644 aaKnown RBP eCLIP16.19■□□□□ 0.18
DDR1-271ENST00000513240 KCNB1Q14721 858 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 QRICH1Q2TAL8 776 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 NBPF20Q3BBV1 942 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 HERC4Q5GLZ8 1057 aaPredicted RBP16.19■□□□□ 0.18
DDR1-271ENST00000513240 APOBEC3HQ6NTF7 200 aaKnown RBP16.19■□□□□ 0.18
DDR1-271ENST00000513240 COG1Q8WTW3 980 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 CCDC47Q96A33 483 aaKnown RBP16.19■□□□□ 0.18
DDR1-271ENST00000513240 C7orf25Q9BPX7 421 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 NDST4Q9H3R1 872 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 TDRD3Q9H7E2 651 aaKnown RBP16.19■□□□□ 0.18
DDR1-271ENST00000513240 ITIH6Q6UXX5 1313 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 NRAPQ86VF7 1730 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 CHMP2AO43633 222 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 AKR1B10O60218 316 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 MMP10P09238 476 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 MYBL2P10244 700 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 EEF1GP26641 437 aaKnown RBP16.19■□□□□ 0.18
DDR1-271ENST00000513240 PDE6BP35913 854 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 SARNPP82979 210 aaKnown RBP16.19■□□□□ 0.18
DDR1-271ENST00000513240 RASSF7Q02833 373 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 TBC1D10BQ4KMP7 808 aaPredicted RBP16.19■□□□□ 0.18
DDR1-271ENST00000513240 CEP112Q8N8E3 955 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 CENPHQ9H3R5 247 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 PKD2L1Q9P0L9 805 aa16.19■□□□□ 0.18
DDR1-271ENST00000513240 ACTN1P12814 892 aa16.18■□□□□ 0.18
DDR1-271ENST00000513240 TMEM266Q2M3C6 531 aa16.18■□□□□ 0.18
DDR1-271ENST00000513240 CCDC40Q4G0X9 1142 aa16.18■□□□□ 0.18
DDR1-271ENST00000513240 NFRKBQ6P4R8 1299 aa16.18■□□□□ 0.18
DDR1-271ENST00000513240 COL23A1Q86Y22 540 aaPredicted RBP16.18■□□□□ 0.18
DDR1-271ENST00000513240 DHTKD1Q96HY7 919 aaPredicted RBP16.18■□□□□ 0.18
DDR1-271ENST00000513240 MS4A14Q96JA4 679 aa16.18■□□□□ 0.18
DDR1-271ENST00000513240 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.18■□□□□ 0.18
DDR1-271ENST00000513240 IRAK1P51617 712 aa16.18■□□□□ 0.18
DDR1-271ENST00000513240 CASP5P51878 434 aa16.18■□□□□ 0.18
DDR1-271ENST00000513240 INHBEP58166 350 aa16.18■□□□□ 0.18
DDR1-271ENST00000513240 RAD54LQ92698 747 aa16.18■□□□□ 0.18
DDR1-271ENST00000513240 DNAJC7Q99615 494 aa16.18■□□□□ 0.18
DDR1-271ENST00000513240 ODF2LQ9ULJ1 636 aa16.18■□□□□ 0.18
DDR1-271ENST00000513240 SKAP2O75563 359 aaPredicted RBP16.17■□□□□ 0.18
DDR1-271ENST00000513240 PLCG2P16885 1265 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 VWA3BQ502W6 1294 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 CNNM4Q6P4Q7 775 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 CACNA2D4Q7Z3S7 1137 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 MSL3Q8N5Y2 521 aaKnown RBP16.17■□□□□ 0.18
DDR1-271ENST00000513240 CCDC51Q96ER9 411 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 SH2D3AQ9BRG2 576 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 LZTS2Q9BRK4 669 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 PYM1Q9BRP8 204 aaKnown RBP16.17■□□□□ 0.18
DDR1-271ENST00000513240 PANK4Q9NVE7 773 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 KIAA1551Q9HCM1 1747 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 CLRN2A0PK11 232 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 RSPH10B2B2RC85 870 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 RSPH10BP0C881 870 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 POLD1P28340 1107 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 CRKP46108 304 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 GABPAQ06546 454 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 KCNA1Q09470 495 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 NOC3LQ8WTT2 800 aaKnown RBP16.17■□□□□ 0.18
DDR1-271ENST00000513240 SAR1BQ9Y6B6 198 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 ROBO3Q96MS0 1386 aa16.17■□□□□ 0.18
DDR1-271ENST00000513240 PNMA6FA0A0J9YX94 578 aa16.16■□□□□ 0.18
DDR1-271ENST00000513240 MED24O75448 989 aa16.16■□□□□ 0.18
DDR1-271ENST00000513240 IPO7O95373 1038 aaKnown RBP16.16■□□□□ 0.18
DDR1-271ENST00000513240 AMPD3Q01432 767 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms